Cow genome map

Conread name: Utr2-C0001780_A02

Conread position: 1-397
Cow position:
Alignm length: 400
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 73

Conread position: 1-405
Cow position:
Alignm length: 407
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-423
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 415

Conread position: 1-423
Cow position:
Alignm length: 426
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 2-406
Cow position:
Alignm length: 408
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 239

Conread position: 2-409
Cow position:
Alignm length: 410
Alignm identity: 255
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 2-421
Cow position:
Alignm length: 425
Alignm identity: 255
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 157

Conread position: 2-423
Cow position:
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 3-397
Cow position:
Alignm length: 397
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 5

Conread position: 5-405
Cow position:
Alignm length: 402
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 9

Conread position: 6-408
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 236

Conread position: 8-409
Cow position:
Alignm length: 403
Alignm identity: 250
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 315, 330

Conread position: 8-414
Cow position:
Alignm length: 410
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 203

Conread position: 8-423
Cow position:
Alignm length: 420
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 318

Conread position: 9-397
Cow position:
Alignm length: 391
Alignm identity: 253
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 9-405
Cow position:
Alignm length: 400
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 246

Conread position: 9-405
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 164

Conread position: 9-423
Cow position:
Alignm length: 417
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 9-423
Cow position:
Alignm length: 417
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 10-405
Cow position:
Alignm length: 399
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 383

Conread position: 10-405
Cow position:
Alignm length: 399
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 315

Conread position: 11-384
Cow position:
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 369

Conread position: 11-397
Cow position:
Alignm length: 391
Alignm identity: 253
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 7, 42

Conread position: 11-410
Cow position:
Alignm length: 403
Alignm identity: 250
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 61

Conread position: 14-278
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 164, 151

Conread position: 14-361
Cow position:
Alignm length: 348
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 14-405
Cow position:
Alignm length: 393
Alignm identity: 244
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 152, 141

Conread position: 14-414
Cow position:
Alignm length: 401
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-414
Cow position:
Alignm length: 401
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-421
Cow position:
Alignm length: 408
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-423
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-423
Cow position:
Alignm length: 412
Alignm identity: 258
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 65

Conread position: 15-412
Cow position:
Alignm length: 400
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 143, 147

Conread position: 15-414
Cow position:
Alignm length: 401
Alignm identity: 257
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 330, 316

Conread position: 17-423
Cow position:
Alignm length: 408
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 20-414
Cow position:
Alignm length: 395
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 24-409
Cow position:
Alignm length: 388
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 145

Conread position: 25-288
Cow position:
Alignm length: 265
Alignm identity: 169
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 133, 138

Conread position: 25-291
Cow position:
Alignm length: 268
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 223, 228

Conread position: 25-367
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 285, 294

Conread position: 25-367
Cow position:
Alignm length: 345
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 153, 133

Conread position: 25-383
Cow position:
Alignm length: 361
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 61

Conread position: 25-397
Cow position:
Alignm length: 378
Alignm identity: 246
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 55

Conread position: 25-397
Cow position:
Alignm length: 376
Alignm identity: 239
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 153, 133

Conread position: 25-397
Cow position:
Alignm length: 374
Alignm identity: 226
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 315, 303

Conread position: 25-397
Cow position:
Alignm length: 375
Alignm identity: 237
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 285, 42

Conread position: 25-398
Cow position:
Alignm length: 375
Alignm identity: 245
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 54

Conread position: 25-408
Cow position:
Alignm length: 386
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 145, 154

Conread position: 25-410
Cow position:
Alignm length: 386
Alignm identity: 238
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 25-410
Cow position:
Alignm length: 386
Alignm identity: 240
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 25-411
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 306

Conread position: 25-411
Cow position:
Alignm length: 387
Alignm identity: 237
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 146, 0

Conread position: 25-414
Cow position:
Alignm length: 390
Alignm identity: 252
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 25-421
Cow position:
Alignm length: 401
Alignm identity: 259
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 242, 249

Conread position: 25-421
Cow position:
Alignm length: 397
Alignm identity: 253
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 25-422
Cow position:
Alignm length: 398
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-423
Cow position:
Alignm length: 402
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 215

Conread position: 25-423
Cow position:
Alignm length: 399
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-423
Cow position:
Alignm length: 401
Alignm identity: 255
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 223, 228

Conread position: 26-340
Cow position:
Alignm length: 318
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 52

Conread position: 26-378
Cow position:
Alignm length: 353
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 26-397
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 222, 227

Conread position: 26-421
Cow position:
Alignm length: 396
Alignm identity: 248
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 26-422
Cow position:
Alignm length: 401
Alignm identity: 251
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 222, 227

Conread position: 27-394
Cow position:
Alignm length: 369
Alignm identity: 219
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 221, 6

Conread position: 27-411
Cow position:
Alignm length: 386
Alignm identity: 244
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 324, 331

Conread position: 29-321
Cow position:
Alignm length: 293
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 29-376
Cow position:
Alignm length: 349
Alignm identity: 209
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 65

Conread position: 29-376
Cow position:
Alignm length: 348
Alignm identity: 210
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 29-397
Cow position:
Alignm length: 370
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 290

Conread position: 29-397
Cow position:
Alignm length: 370
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 281, 290

Conread position: 29-397
Cow position:
Alignm length: 371
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 224

Conread position: 29-397
Cow position:
Alignm length: 371
Alignm identity: 228
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 58

Conread position: 29-398
Cow position:
Alignm length: 374
Alignm identity: 248
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 185, 180

Conread position: 29-398
Cow position:
Alignm length: 370
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 29-410
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-412
Cow position:
Alignm length: 388
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 6, 45

Conread position: 29-413
Cow position:
Alignm length: 385
Alignm identity: 247
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 107, 0

Conread position: 29-413
Cow position:
Alignm length: 386
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 290

Conread position: 29-414
Cow position:
Alignm length: 389
Alignm identity: 254
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 65, 61

Conread position: 29-414
Cow position:
Alignm length: 386
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 29-414
Cow position:
Alignm length: 387
Alignm identity: 251
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 65, 58

Conread position: 29-421
Cow position:
Alignm length: 393
Alignm identity: 251
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 29-421
Cow position:
Alignm length: 396
Alignm identity: 260
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 66, 62

Conread position: 29-421
Cow position:
Alignm length: 393
Alignm identity: 244
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 29-422
Cow position:
Alignm length: 395
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 356, 361

Conread position: 30-323
Cow position:
Alignm length: 294
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 30-334
Cow position:
Alignm length: 306
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 231, 217

Conread position: 30-359
Cow position:
Alignm length: 332
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 220, 210

Conread position: 30-372
Cow position:
Alignm length: 345
Alignm identity: 209
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 47

Conread position: 30-383
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 57

Conread position: 30-393
Cow position:
Alignm length: 365
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 282, 289

Conread position: 30-394
Cow position:
Alignm length: 367
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 67

Conread position: 30-397
Cow position:
Alignm length: 368
Alignm identity: 220
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 30-397
Cow position:
Alignm length: 372
Alignm identity: 228
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 74

Conread position: 30-397
Cow position:
Alignm length: 368
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-397
Cow position:
Alignm length: 368
Alignm identity: 231
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 30-397
Cow position:
Alignm length: 368
Alignm identity: 231
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 30-397
Cow position:
Alignm length: 370
Alignm identity: 235
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 216, 223

Conread position: 30-398
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-398
Cow position:
Alignm length: 369
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 30-403
Cow position:
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-410
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 30-410
Cow position:
Alignm length: 382
Alignm identity: 235
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 43, 61

Conread position: 30-411
Cow position:
Alignm length: 382
Alignm identity: 237
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 30-412
Cow position:
Alignm length: 386
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 80

Conread position: 30-412
Cow position:
Alignm length: 383
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 30-412
Cow position:
Alignm length: 384
Alignm identity: 240
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 282, 289

Conread position: 30-412
Cow position:
Alignm length: 383
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 30-414
Cow position:
Alignm length: 386
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 244

Conread position: 30-414
Cow position:
Alignm length: 385
Alignm identity: 246
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 30-422
Cow position:
Alignm length: 395
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 289

Conread position: 31-398
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 139

Conread position: 31-409
Cow position:
Alignm length: 383
Alignm identity: 244
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 39

Conread position: 32-305
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 0

Conread position: 33-397
Cow position:
Alignm length: 370
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 38

Conread position: 45-414
Cow position:
Alignm length: 370
Alignm identity: 224
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 45-422
Cow position:
Alignm length: 380
Alignm identity: 245
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 36

Conread position: 49-397
Cow position:
Alignm length: 349
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 52-398
Cow position:
Alignm length: 347
Alignm identity: 221
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 52-421
Cow position:
Alignm length: 371
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 125

Conread position: 53-378
Cow position:
Alignm length: 328
Alignm identity: 200
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 41

Conread position: 54-382
Cow position:
Alignm length: 331
Alignm identity: 205
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 291, 274

Conread position: 54-414
Cow position:
Alignm length: 361
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 54-422
Cow position:
Alignm length: 371
Alignm identity: 232
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 104, 118

Conread position: 76-397
Cow position:
Alignm length: 324
Alignm identity: 204
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 148, 78

Conread position: 82-372
Cow position:
Alignm length: 291
Alignm identity: 180
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 83-423
Cow position:
Alignm length: 342
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 158

Conread position: 84-414
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 92-410
Cow position:
Alignm length: 319
Alignm identity: 212
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 92-414
Cow position:
Alignm length: 323
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 93-398
Cow position:
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 65

Conread position: 93-414
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 94-397
Cow position:
Alignm length: 304
Alignm identity: 195
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 97-394
Cow position:
Alignm length: 298
Alignm identity: 195
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 98-292
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 101-423
Cow position:
Alignm length: 325
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 53

Conread position: 108-397
Cow position:
Alignm length: 291
Alignm identity: 180
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 154, 138

Conread position: 111-410
Cow position:
Alignm length: 300
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 135-404
Cow position:
Alignm length: 273
Alignm identity: 178
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 29

Conread position: 179-414
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.