Cow genome map

Conread name: Utr2-C0001780_A02

Conread position: 1-398
Cow position:
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 331

Conread position: 1-413
Cow position:
Alignm length: 414
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 13

Conread position: 1-413
Cow position:
Alignm length: 415
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-414
Cow position:
Alignm length: 417
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 331

Conread position: 6-403
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 6-422
Cow position:
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 6-422
Cow position:
Alignm length: 419
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 146

Conread position: 8-412
Cow position:
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 248

Conread position: 8-417
Cow position:
Alignm length: 420
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 65

Conread position: 9-422
Cow position:
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 78

Conread position: 9-423
Cow position:
Alignm length: 418
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 247

Conread position: 10-383
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 82

Conread position: 10-396
Cow position:
Alignm length: 392
Alignm identity: 255
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 88

Conread position: 10-397
Cow position:
Alignm length: 393
Alignm identity: 254
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 66, 72

Conread position: 10-398
Cow position:
Alignm length: 393
Alignm identity: 250
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 78, 64

Conread position: 10-403
Cow position:
Alignm length: 398
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 83

Conread position: 10-403
Cow position:
Alignm length: 398
Alignm identity: 259
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 72, 89

Conread position: 10-403
Cow position:
Alignm length: 397
Alignm identity: 261
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 71, 84

Conread position: 10-406
Cow position:
Alignm length: 401
Alignm identity: 252
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 66

Conread position: 10-406
Cow position:
Alignm length: 399
Alignm identity: 253
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 66, 61

Conread position: 10-412
Cow position:
Alignm length: 403
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-412
Cow position:
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-423
Cow position:
Alignm length: 420
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 88

Conread position: 12-407
Cow position:
Alignm length: 402
Alignm identity: 265
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 82, 59

Conread position: 13-384
Cow position:
Alignm length: 375
Alignm identity: 238
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 63, 86

Conread position: 13-398
Cow position:
Alignm length: 389
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 241

Conread position: 13-406
Cow position:
Alignm length: 396
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 80

Conread position: 13-412
Cow position:
Alignm length: 402
Alignm identity: 237
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 198, 204

Conread position: 14-203
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 14-288
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-311
Cow position:
Alignm length: 300
Alignm identity: 189
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 230, 239

Conread position: 14-367
Cow position:
Alignm length: 355
Alignm identity: 236
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 80, 76

Conread position: 14-370
Cow position:
Alignm length: 357
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-398
Cow position:
Alignm length: 387
Alignm identity: 252
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 80, 73

Conread position: 14-400
Cow position:
Alignm length: 387
Alignm identity: 244
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 14-403
Cow position:
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-403
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 305

Conread position: 14-409
Cow position:
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-411
Cow position:
Alignm length: 398
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-411
Cow position:
Alignm length: 399
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 240

Conread position: 14-412
Cow position:
Alignm length: 399
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-412
Cow position:
Alignm length: 400
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 239

Conread position: 14-412
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 239

Conread position: 14-413
Cow position:
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 150

Conread position: 14-413
Cow position:
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 320

Conread position: 14-421
Cow position:
Alignm length: 409
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 315

Conread position: 14-423
Cow position:
Alignm length: 410
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-423
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 240

Conread position: 14-423
Cow position:
Alignm length: 411
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 239

Conread position: 15-403
Cow position:
Alignm length: 389
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-420
Cow position:
Alignm length: 409
Alignm identity: 268
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 49, 55

Conread position: 16-288
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 16-394
Cow position:
Alignm length: 381
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 142

Conread position: 16-403
Cow position:
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 54

Conread position: 16-411
Cow position:
Alignm length: 398
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 148

Conread position: 16-417
Cow position:
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 301

Conread position: 16-417
Cow position:
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 307

Conread position: 20-409
Cow position:
Alignm length: 390
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-374
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 69, 58

Conread position: 25-375
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-375
Cow position:
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-398
Cow position:
Alignm length: 376
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 56

Conread position: 25-403
Cow position:
Alignm length: 382
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 66, 54

Conread position: 25-411
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 307

Conread position: 25-411
Cow position:
Alignm length: 388
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 166, 160

Conread position: 25-411
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 293

Conread position: 25-411
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 309

Conread position: 25-412
Cow position:
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-412
Cow position:
Alignm length: 392
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 60

Conread position: 25-414
Cow position:
Alignm length: 392
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 299

Conread position: 25-423
Cow position:
Alignm length: 416
Alignm identity: 249
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 223, 0

Conread position: 26-391
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 75

Conread position: 26-403
Cow position:
Alignm length: 379
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 241, 248

Conread position: 26-423
Cow position:
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 227

Conread position: 28-422
Cow position:
Alignm length: 398
Alignm identity: 259
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 59

Conread position: 29-287
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 129, 142

Conread position: 29-321
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 65, 52

Conread position: 29-405
Cow position:
Alignm length: 377
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-405
Cow position:
Alignm length: 383
Alignm identity: 248
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 8, 47

Conread position: 29-421
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 30-397
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 321, 328

Conread position: 30-407
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 344

Conread position: 30-408
Cow position:
Alignm length: 381
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 289

Conread position: 30-409
Cow position:
Alignm length: 384
Alignm identity: 235
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 138

Conread position: 30-411
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 30-414
Cow position:
Alignm length: 391
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 55

Conread position: 31-411
Cow position:
Alignm length: 381
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 31-411
Cow position:
Alignm length: 381
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 31-414
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 31-423
Cow position:
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 33-397
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 33-403
Cow position:
Alignm length: 375
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 215, 229

Conread position: 33-405
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 129, 136

Conread position: 35-374
Cow position:
Alignm length: 344
Alignm identity: 221
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 59, 46

Conread position: 35-394
Cow position:
Alignm length: 361
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 296

Conread position: 35-403
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 59, 46

Conread position: 48-412
Cow position:
Alignm length: 368
Alignm identity: 231
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 209, 200

Conread position: 54-406
Cow position:
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 276

Conread position: 77-421
Cow position:
Alignm length: 345
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 81-423
Cow position:
Alignm length: 346
Alignm identity: 215
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 113

Conread position: 87-335
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 243, 0

Conread position: 92-403
Cow position:
Alignm length: 315
Alignm identity: 195
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 102

Conread position: 92-421
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 93-405
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 78

Conread position: 94-412
Cow position:
Alignm length: 319
Alignm identity: 215
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 110-397
Cow position:
Alignm length: 288
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 123-423
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 201

Conread position: 149-412
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 19

Conread position: 152-404
Cow position:
Alignm length: 256
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 43

Conread position: 177-397
Cow position:
Alignm length: 222
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 163, 155

Show alignments to all cow chromosomes.