Cow genome map

Conread name: Utr2-C0001780_A02

Conread position: 1-298
Cow position:
Alignm length: 302
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 162

Conread position: 1-354
Cow position:
Alignm length: 356
Alignm identity: 236
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 1-422
Cow position:
Alignm length: 424
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-423
Cow position:
Alignm length: 425
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-423
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-383
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 88

Conread position: 3-403
Cow position:
Alignm length: 402
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 9-414
Cow position:
Alignm length: 410
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 146

Conread position: 10-297
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 10-352
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-403
Cow position:
Alignm length: 399
Alignm identity: 254
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 66

Conread position: 14-254
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 14-353
Cow position:
Alignm length: 343
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 67

Conread position: 14-370
Cow position:
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-384
Cow position:
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 0

Conread position: 14-397
Cow position:
Alignm length: 385
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 58

Conread position: 14-403
Cow position:
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-404
Cow position:
Alignm length: 395
Alignm identity: 255
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 65

Conread position: 14-405
Cow position:
Alignm length: 394
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 166

Conread position: 14-423
Cow position:
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 104

Conread position: 14-423
Cow position:
Alignm length: 411
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 315

Conread position: 15-412
Cow position:
Alignm length: 404
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 59

Conread position: 16-370
Cow position:
Alignm length: 355
Alignm identity: 226
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 16-414
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 54

Conread position: 20-397
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 93

Conread position: 24-412
Cow position:
Alignm length: 390
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 308

Conread position: 25-326
Cow position:
Alignm length: 304
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 267, 293

Conread position: 25-409
Cow position:
Alignm length: 386
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 71

Conread position: 25-414
Cow position:
Alignm length: 391
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 285, 299

Conread position: 25-423
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 26-423
Cow position:
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-397
Cow position:
Alignm length: 372
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 43

Conread position: 27-403
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-411
Cow position:
Alignm length: 386
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 44

Conread position: 28-410
Cow position:
Alignm length: 384
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 246, 23

Conread position: 29-361
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-409
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 125

Conread position: 30-413
Cow position:
Alignm length: 385
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 328

Conread position: 30-414
Cow position:
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-414
Cow position:
Alignm length: 385
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-423
Cow position:
Alignm length: 394
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 33-409
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 33-414
Cow position:
Alignm length: 382
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 38-386
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 45-411
Cow position:
Alignm length: 367
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 45-412
Cow position:
Alignm length: 368
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 45-423
Cow position:
Alignm length: 381
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 107

Conread position: 89-410
Cow position:
Alignm length: 323
Alignm identity: 219
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 64, 69

Conread position: 93-412
Cow position:
Alignm length: 322
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 54, 67

Conread position: 94-413
Cow position:
Alignm length: 323
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 184, 192

Conread position: 97-414
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 98-405
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 108-414
Cow position:
Alignm length: 307
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 108-423
Cow position:
Alignm length: 317
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 228, 223

Conread position: 109-414
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 35

Conread position: 113-423
Cow position:
Alignm length: 312
Alignm identity: 199
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 245, 25

Conread position: 192-417
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 207-398
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.