Cow genome map


           Conread name:
           Utr2-C0001780_A02
        

               Conread position:
               2-403
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               7-369
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 19
               

               Conread position:
               8-398
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               8-399
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               9-403
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               9-409
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 144
               

               Conread position:
               9-411
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               10, 114
               

               Conread position:
               10-383
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-411
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               316, 29
               

               Conread position:
               13-217
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               59, 66
               

               Conread position:
               13-414
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               350, 0
               

               Conread position:
               14-242
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-319
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               256, 198
               

               Conread position:
               14-370
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-382
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               266, 0
               

               Conread position:
               14-399
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 155
               

               Conread position:
               14-404
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               14-404
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               264, 0
               

               Conread position:
               14-406
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 318
               

               Conread position:
               14-411
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               191, 139
               

               Conread position:
               14-411
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 318
               

               Conread position:
               14-423
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 155
               

               Conread position:
               15-206
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-301
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               60, 56
               

               Conread position:
               15-396
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               379, 96
               

               Conread position:
               15-403
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-421
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-422
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               81, 71
               

               Conread position:
               26-398
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               27-414
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-384
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-403
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 134
               

               Conread position:
               29-403
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 225
               

               Conread position:
               29-403
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               216, 128
               

               Conread position:
               29-421
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 35
               

               Conread position:
               30-326
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               30-382
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-398
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               61, 42
               

               Conread position:
               30-403
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 98
               

               Conread position:
               30-403
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-411
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-412
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-412
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               155, 150
               

               Conread position:
               30-421
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 98
               

               Conread position:
               30-421
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-423
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               280, 294
               

               Conread position:
               31-412
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               130, 119
               

               Conread position:
               31-421
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               159, 149
               

               Conread position:
               32-411
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               37-411
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               206, 214
               

               Conread position:
               49-393
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               251, 0
               

               Conread position:
               83-403
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               38, 253
               

               Conread position:
               89-403
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-414
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               78, 33
               

               Conread position:
               93-421
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 75
               

               Conread position:
               97-420
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               318, 0
               

               Conread position:
               108-403
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 106
               

               Conread position:
               111-404
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               133, 140
               

               Conread position:
               217-405
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.