Cow genome map


           Conread name:
           Utr2-C0001780_A02
        

               Conread position:
               1-405
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 323
               

               Conread position:
               1-405
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 159
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-408
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               6-391
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               70, 93
               

               Conread position:
               6-404
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               7-384
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               7-403
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               90, 65
               

               Conread position:
               7-409
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 86
               

               Conread position:
               8-403
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 171
               

               Conread position:
               8-403
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 171
               

               Conread position:
               8-407
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               9-412
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 312
               

               Conread position:
               10-321
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 77
               

               Conread position:
               10-342
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               10-397
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 243
               

               Conread position:
               10-403
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               362, 0
               

               Conread position:
               10-403
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-414
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-270
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               166, 146
               

               Conread position:
               13-405
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 156
               

               Conread position:
               13-409
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 98
               

               Conread position:
               14-360
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-393
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-397
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               14-397
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 305
               

               Conread position:
               14-403
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-404
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               135, 152
               

               Conread position:
               14-411
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 236
               

               Conread position:
               14-412
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 80
               

               Conread position:
               14-412
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-414
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 143
               

               Conread position:
               14-423
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               15-238
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               15-294
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               15-321
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               151, 168
               

               Conread position:
               15-403
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-403
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 79
               

               Conread position:
               15-403
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 143
               

               Conread position:
               15-403
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-405
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               144, 159
               

               Conread position:
               15-409
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 78
               

               Conread position:
               15-411
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-412
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               15-414
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-414
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 161
               

               Conread position:
               16-403
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 139
               

               Conread position:
               16-403
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-412
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-411
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-412
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 301
               

               Conread position:
               17-423
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 313
               

               Conread position:
               25-323
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               25-398
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 67
               

               Conread position:
               25-404
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               196, 186
               

               Conread position:
               25-407
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 67
               

               Conread position:
               26-398
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               26-403
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               28-397
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 42
               

               Conread position:
               29-398
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 52
               

               Conread position:
               29-403
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 224
               

               Conread position:
               29-414
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               30-321
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               30-374
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               30-398
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 60
               

               Conread position:
               30-403
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               30-403
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               30-407
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               52, 57
               

               Conread position:
               30-412
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 131
               

               Conread position:
               31-403
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               132, 146
               

               Conread position:
               32-403
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               133, 147
               

               Conread position:
               35-407
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               36-403
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               12, 7
               

               Conread position:
               44-407
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               38, 48
               

               Conread position:
               45-414
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 200
               

               Conread position:
               80-392
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               90-403
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               248, 142
               

               Conread position:
               92-421
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               243, 231
               

               Conread position:
               93-414
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               160, 150
               

               Conread position:
               95-403
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 65
               

               Conread position:
               108-404
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               164-403
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               164, 8
               

               Conread position:
               206-403
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               104, 111
               
Show alignments to all cow chromosomes.