Cow genome map
Conread name: | Utr2-C0001780_A02 |
Conread position: | 1-409 |
Cow position: | chr8:48407325-48406915 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 247 |
Conread position: | 1-414 |
Cow position: | chr8:48407241-48406826 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 1-414 |
Cow position: | chr8:48407409-48406994 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 242 |
Conread position: | 2-423 |
Cow position: | chr8:55580876-55581299 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 253 |
Conread position: | 7-397 |
Cow position: | chr8:46816862-46817252 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-414 |
Cow position: | chr8:55581217-55581626 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 257 |
Conread position: | 8-397 |
Cow position: | chr8:46816441-46816832 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 163 |
Conread position: | 8-411 |
Cow position: | chr8:45201078-45201483 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 326 |
Conread position: | 9-414 |
Cow position: | chr8:48406981-48406574 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 267 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 11, 65 |
Conread position: | 10-408 |
Cow position: | chr8:46816527-46816927 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 14-237 |
Cow position: | chr8:46817121-46817344 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 158 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-283 |
Cow position: | chr8:55581478-55581747 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 174 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-309 |
Cow position: | chr8:48406554-48406259 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 190 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 230, 238 |
Conread position: | 14-321 |
Cow position: | chr8:55581394-55581701 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-377 |
Cow position: | chr8:48407142-48406779 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 235 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-384 |
Cow position: | chr8:45201674-45202037 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 245 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 310, 0 |
Conread position: | 14-403 |
Cow position: | chr8:46816365-46816754 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 57 |
Conread position: | 14-403 |
Cow position: | chr8:55581310-55581699 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 252 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 234, 239 |
Conread position: | 14-405 |
Cow position: | chr8:48407478-48407087 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 305 |
Conread position: | 14-411 |
Cow position: | chr8:45201338-45201735 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 65 |
Conread position: | 14-411 |
Cow position: | chr8:46816197-46816594 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 137 |
Conread position: | 14-411 |
Cow position: | chr8:46816701-46817098 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-412 |
Cow position: | chr8:46815942-46816343 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 242 |
Conread position: | 14-423 |
Cow position: | chr8:45201170-45201579 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 297, 303 |
Conread position: | 14-423 |
Cow position: | chr8:48406890-48406481 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 263 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 129, 148 |
Conread position: | 15-361 |
Cow position: | chr8:46817038-46817384 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 227 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 295, 318 |
Conread position: | 15-370 |
Cow position: | chr8:48406637-48406282 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 231 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 313, 317 |
Conread position: | 15-398 |
Cow position: | chr8:45201591-45201974 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 348, 358 |
Conread position: | 15-409 |
Cow position: | chr8:45201507-45201901 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-411 |
Cow position: | chr8:45201423-45201819 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-423 |
Cow position: | chr8:45201255-45201663 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-397 |
Cow position: | chr8:46816283-46816664 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-412 |
Cow position: | chr8:55581144-55581540 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 62 |
Conread position: | 20-405 |
Cow position: | chr8:46816959-46817344 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-421 |
Cow position: | chr8:46816035-46816436 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 310 |
Conread position: | 23-403 |
Cow position: | chr8:48407637-48407257 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-302 |
Cow position: | chr8:48407047-48406770 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 193 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-403 |
Cow position: | chr8:48407551-48407172 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 369, 0 |
Conread position: | 27-397 |
Cow position: | chr8:45201015-45201385 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 27-414 |
Cow position: | chr8:55580820-55581206 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 16 |
Conread position: | 28-404 |
Cow position: | chr8:46816629-46817007 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 30-394 |
Cow position: | chr8:55580737-55581102 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 241 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 8, 40 |
Conread position: | 30-405 |
Cow position: | chr8:55580990-55581365 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-411 |
Cow position: | chr8:46816801-46817182 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 302 |
Conread position: | 32-403 |
Cow position: | chr8:45200936-45201307 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 39 |
Conread position: | 83-414 |
Cow position: | chr8:48406737-48406406 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 225 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 24, 17 |
Conread position: | 92-397 |
Cow position: | chr8:6958018-6957714 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 198 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 156, 169 |
Conread position: | 93-403 |
Cow position: | chr8:45200913-45201223 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 216 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 107, 101 |
Conread position: | 97-392 |
Cow position: | chr8:48407647-48407352 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 204 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 135-384 |
Cow position: | chr8:6958059-6957810 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 159 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 176-423 |
Cow position: | chr8:48407652-48407405 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 159 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.