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Cow genome map

           
Conread name:
           
Utr2-C0001801_A03
        

               
Conread position:
               
128-387
               

               
Cow position:
               
chr27:20917332-20917080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 119
               

               
Conread position:
               
189-371
               

               
Cow position:
               
chr27:2685117-2685298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
214-429
               

               
Cow position:
               
chr27:23477653-23477862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
215-347
               

               
Cow position:
               
chr27:19741686-19741556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
215-413
               

               
Cow position:
               
chr27:22102938-22102743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
218-471
               

               
Cow position:
               
chr27:20485756-20486023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
218-499
               

               
Cow position:
               
chr27:23918332-23918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
219-408
               

               
Cow position:
               
chr27:4195264-4195443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
221-413
               

               
Cow position:
               
chr27:26939788-26939977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
221-434
               

               
Cow position:
               
chr27:23495991-23495787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
221-508
               

               
Cow position:
               
chr27:23859873-23860167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
226-483
               

               
Cow position:
               
chr27:9504262-9504530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
227-450
               

               
Cow position:
               
chr27:31498500-31498722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
229-487
               

               
Cow position:
               
chr27:19546804-19546533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
232-444
               

               
Cow position:
               
chr27:23232631-23232846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 203
               

               
Conread position:
               
232-471
               

               
Cow position:
               
chr27:426687-426934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
233-375
               

               
Cow position:
               
chr27:23996401-23996257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
233-424
               

               
Cow position:
               
chr27:24240073-24240271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
111, 67
               

               
Conread position:
               
233-495
               

               
Cow position:
               
chr27:16965294-16965563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 202
               

               
Conread position:
               
234-402
               

               
Cow position:
               
chr27:22181783-22181961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
234-483
               

               
Cow position:
               
chr27:10404392-10404139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
235-429
               

               
Cow position:
               
chr27:26245825-26245627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
235-490
               

               
Cow position:
               
chr27:20354324-20354574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
237-459
               

               
Cow position:
               
chr27:11133818-11134039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
238-412
               

               
Cow position:
               
chr27:2934238-2934403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
241-507
               

               
Cow position:
               
chr27:22035637-22035376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
189, 16
               

               
Conread position:
               
242-422
               

               
Cow position:
               
chr27:21101560-21101381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
242-433
               

               
Cow position:
               
chr27:29877745-29877553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
242-450
               

               
Cow position:
               
chr27:28016006-28015792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
242-464
               

               
Cow position:
               
chr27:26400986-26400763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
188, 5
               

               
Conread position:
               
242-486
               

               
Cow position:
               
chr27:212682-212937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
101, 5
               

               
Conread position:
               
242-491
               

               
Cow position:
               
chr27:13875465-13875712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
242-506
               

               
Cow position:
               
chr27:1353312-1353584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
242-508
               

               
Cow position:
               
chr27:15865339-15865610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
243-429
               

               
Cow position:
               
chr27:26437387-26437205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
243-508
               

               
Cow position:
               
chr27:30914740-30915006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
245-460
               

               
Cow position:
               
chr27:4414082-4413864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
182, 37
               

               
Conread position:
               
246-485
               

               
Cow position:
               
chr27:26323175-26323425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
22, 239
               

               
Conread position:
               
246-489
               

               
Cow position:
               
chr27:6241461-6241209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
246-491
               

               
Cow position:
               
chr27:29319140-29319396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
246-508
               

               
Cow position:
               
chr27:29593896-29593629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
247-408
               

               
Cow position:
               
chr27:5227576-5227427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
247-429
               

               
Cow position:
               
chr27:22748065-22748244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
247-429
               

               
Cow position:
               
chr27:24358076-24358249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr27:7412127-7412358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
247-503
               

               
Cow position:
               
chr27:815071-815338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
247-508
               

               
Cow position:
               
chr27:15867130-15867396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
183, 9
               

               
Conread position:
               
247-508
               

               
Cow position:
               
chr27:20514559-20514820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
247-508
               

               
Cow position:
               
chr27:30869016-30868741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 264
               

               
Conread position:
               
248-429
               

               
Cow position:
               
chr27:27606558-27606380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
248-434
               

               
Cow position:
               
chr27:4398746-4398571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
248-451
               

               
Cow position:
               
chr27:28253975-28254175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
248-454
               

               
Cow position:
               
chr27:12284730-12284941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
248-481
               

               
Cow position:
               
chr27:672400-672636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
248-501
               

               
Cow position:
               
chr27:8062615-8062354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 130
               

               
Conread position:
               
248-501
               

               
Cow position:
               
chr27:24303681-24303940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 8
               

               
Conread position:
               
248-507
               

               
Cow position:
               
chr27:16103548-16103807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
249-423
               

               
Cow position:
               
chr27:20490256-20490441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
249-429
               

               
Cow position:
               
chr27:21660876-21661052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
249-429
               

               
Cow position:
               
chr27:23957258-23957436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
249-459
               

               
Cow position:
               
chr27:26317805-26318009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
104, 8
               

               
Conread position:
               
249-508
               

               
Cow position:
               
chr27:26112182-26111911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
250-429
               

               
Cow position:
               
chr27:25000226-25000044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
250-438
               

               
Cow position:
               
chr27:21951241-21951054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
250-474
               

               
Cow position:
               
chr27:19452742-19452970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
250-491
               

               
Cow position:
               
chr27:16088529-16088792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 142
               

               
Conread position:
               
250-492
               

               
Cow position:
               
chr27:31170335-31170078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
251-438
               

               
Cow position:
               
chr27:11145622-11145803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
251-507
               

               
Cow position:
               
chr27:24446397-24446156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
200, 25
               

               
Conread position:
               
253-470
               

               
Cow position:
               
chr27:6162663-6162446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
255-413
               

               
Cow position:
               
chr27:28192869-28192715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
256-507
               

               
Cow position:
               
chr27:31210294-31210547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
175, 95
               

               
Conread position:
               
256-508
               

               
Cow position:
               
chr27:9977431-9977691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
256-508
               

               
Cow position:
               
chr27:30872314-30872060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
257-383
               

               
Cow position:
               
chr27:28290587-28290710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
257-424
               

               
Cow position:
               
chr27:26154062-26154232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
257-448
               

               
Cow position:
               
chr27:25790049-25790233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
173, 17
               

               
Conread position:
               
257-450
               

               
Cow position:
               
chr27:13801549-13801752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
257-471
               

               
Cow position:
               
chr27:6106452-6106665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
170, 44
               

               
Conread position:
               
257-492
               

               
Cow position:
               
chr27:7649842-7649595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
257-506
               

               
Cow position:
               
chr27:22220295-22220555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
258-471
               

               
Cow position:
               
chr27:28206550-28206764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
173, 81
               

               
Conread position:
               
259-454
               

               
Cow position:
               
chr27:8630126-8629924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
259-467
               

               
Cow position:
               
chr27:17908515-17908304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
259-487
               

               
Cow position:
               
chr27:28896625-28896863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
259-501
               

               
Cow position:
               
chr27:16705001-16705251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
171, 18
               

               
Conread position:
               
260-508
               

               
Cow position:
               
chr27:30884985-30885231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
261-495
               

               
Cow position:
               
chr27:15315268-15315506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
262-430
               

               
Cow position:
               
chr27:7425439-7425271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
262-484
               

               
Cow position:
               
chr27:3306536-3306751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
165, 68
               

               
Conread position:
               
262-496
               

               
Cow position:
               
chr27:18435380-18435143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
168, 85
               

               
Conread position:
               
262-505
               

               
Cow position:
               
chr27:10979610-10979861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
262-508
               

               
Cow position:
               
chr27:11561525-11561775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
263-466
               

               
Cow position:
               
chr27:12459036-12459244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
263-490
               

               
Cow position:
               
chr27:28518041-28518281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 236
               

               
Conread position:
               
263-507
               

               
Cow position:
               
chr27:20897269-20897024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
169, 88
               

               
Conread position:
               
264-412
               

               
Cow position:
               
chr27:3498308-3498450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
264-434
               

               
Cow position:
               
chr27:11528681-11528851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 168
               

               
Conread position:
               
264-445
               

               
Cow position:
               
chr27:29246392-29246213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
166, 37
               

               
Conread position:
               
264-451
               

               
Cow position:
               
chr27:19557143-19557324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
264-471
               

               
Cow position:
               
chr27:14343683-14343490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
157, 46
               

               
Conread position:
               
264-471
               

               
Cow position:
               
chr27:15378729-15378514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
264-471
               

               
Cow position:
               
chr27:27460826-27460607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 151
               

               
Conread position:
               
264-472
               

               
Cow position:
               
chr27:20628811-20629035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
264-480
               

               
Cow position:
               
chr27:31153802-31153592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
264-482
               

               
Cow position:
               
chr27:27648563-27648341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
166, 92
               

               
Conread position:
               
264-482
               

               
Cow position:
               
chr27:29388424-29388648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
264-484
               

               
Cow position:
               
chr27:31248854-31248635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
166, 87
               

               
Conread position:
               
264-486
               

               
Cow position:
               
chr27:2957169-2957386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
188, 73
               

               
Conread position:
               
264-493
               

               
Cow position:
               
chr27:19387772-19388004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
264-498
               

               
Cow position:
               
chr27:16512415-16512179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
165, 61
               

               
Conread position:
               
264-506
               

               
Cow position:
               
chr27:19932818-19933062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 169
               

               
Conread position:
               
264-508
               

               
Cow position:
               
chr27:15409272-15409035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
166, 13
               

               
Conread position:
               
264-508
               

               
Cow position:
               
chr27:27020343-27020105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
264-508
               

               
Cow position:
               
chr27:28190439-28190215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
265-412
               

               
Cow position:
               
chr27:19991902-19992048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
265-425
               

               
Cow position:
               
chr27:26226535-26226378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
265-454
               

               
Cow position:
               
chr27:1184420-1184237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
265-464
               

               
Cow position:
               
chr27:19576570-19576365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
265-484
               

               
Cow position:
               
chr27:13411615-13411388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
265-487
               

               
Cow position:
               
chr27:20584714-20584475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
71, 117
               

               
Conread position:
               
266-507
               

               
Cow position:
               
chr27:26643457-26643685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
267-444
               

               
Cow position:
               
chr27:5539937-5539765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
268-491
               

               
Cow position:
               
chr27:28260778-28260551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
269-429
               

               
Cow position:
               
chr27:27632836-27632685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
269-466
               

               
Cow position:
               
chr27:17102657-17102856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
160, 70
               

               
Conread position:
               
269-484
               

               
Cow position:
               
chr27:25151846-25152063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
68, 126
               

               
Conread position:
               
270-480
               

               
Cow position:
               
chr27:12596540-12596745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
181, 67
               

               
Conread position:
               
271-459
               

               
Cow position:
               
chr27:22267979-22268178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
271-471
               

               
Cow position:
               
chr27:29431235-29431429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
159, 67
               

               
Conread position:
               
272-444
               

               
Cow position:
               
chr27:3518262-3518435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
272-451
               

               
Cow position:
               
chr27:12425048-12425228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 113
               

               
Conread position:
               
272-456
               

               
Cow position:
               
chr27:16246568-16246747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
272-476
               

               
Cow position:
               
chr27:26481437-26481225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
272-499
               

               
Cow position:
               
chr27:262096-262316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
272-500
               

               
Cow position:
               
chr27:8790982-8790747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
158, 53
               

               
Conread position:
               
273-408
               

               
Cow position:
               
chr27:23527738-23527606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
273-412
               

               
Cow position:
               
chr27:3698912-3698773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
273-413
               

               
Cow position:
               
chr27:4487019-4486877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
273-413
               

               
Cow position:
               
chr27:16275919-16275779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
273-413
               

               
Cow position:
               
chr27:21054218-21054360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
273-413
               

               
Cow position:
               
chr27:22150932-22150794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
273-413
               

               
Cow position:
               
chr27:27012457-27012599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
273-413
               

               
Cow position:
               
chr27:30441463-30441605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
273-414
               

               
Cow position:
               
chr27:24952191-24952053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
273-414
               

               
Cow position:
               
chr27:26467800-26467657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
273-414
               

               
Cow position:
               
chr27:30361870-30362018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
273-422
               

               
Cow position:
               
chr27:21448061-21447920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
273-424
               

               
Cow position:
               
chr27:30884789-30884939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
273-425
               

               
Cow position:
               
chr27:21143316-21143156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
273-425
               

               
Cow position:
               
chr27:29249347-29249504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
273-429
               

               
Cow position:
               
chr27:178624-178779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
273-429
               

               
Cow position:
               
chr27:2949555-2949411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
273-429
               

               
Cow position:
               
chr27:31183334-31183492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
273-434
               

               
Cow position:
               
chr27:30444913-30444760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
273-443
               

               
Cow position:
               
chr27:591007-590833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
273-444
               

               
Cow position:
               
chr27:11480877-11480706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 153
               

               
Conread position:
               
273-450
               

               
Cow position:
               
chr27:20048398-20048577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
273-450
               

               
Cow position:
               
chr27:29308104-29308286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
273-451
               

               
Cow position:
               
chr27:1067337-1067512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
158, 35
               

               
Conread position:
               
273-451
               

               
Cow position:
               
chr27:20266465-20266288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
273-452
               

               
Cow position:
               
chr27:11208796-11208616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
273-456
               

               
Cow position:
               
chr27:28922134-28921952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
273-456
               

               
Cow position:
               
chr27:31157571-31157752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 105
               

               
Conread position:
               
273-460
               

               
Cow position:
               
chr27:28476347-28476166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
167, 15
               

               
Conread position:
               
273-462
               

               
Cow position:
               
chr27:13204226-13204415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
157, 64
               

               
Conread position:
               
273-469
               

               
Cow position:
               
chr27:24223716-24223915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
273-469
               

               
Cow position:
               
chr27:29164536-29164733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
273-471
               

               
Cow position:
               
chr27:4944745-4944550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
157, 65
               

               
Conread position:
               
273-471
               

               
Cow position:
               
chr27:7343667-7343463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
273-471
               

               
Cow position:
               
chr27:14670619-14670417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
273-471
               

               
Cow position:
               
chr27:27055057-27055251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
150, 64
               

               
Conread position:
               
273-472
               

               
Cow position:
               
chr27:22547627-22547433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
159, 82
               

               
Conread position:
               
273-473
               

               
Cow position:
               
chr27:22180005-22179802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
273-487
               

               
Cow position:
               
chr27:7935394-7935175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
153, 12
               

               
Conread position:
               
273-487
               

               
Cow position:
               
chr27:17331253-17331477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 119
               

               
Conread position:
               
273-487
               

               
Cow position:
               
chr27:25809755-25809538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
273-492
               

               
Cow position:
               
chr27:10307542-10307314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
273-492
               

               
Cow position:
               
chr27:15453974-15454194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
273-492
               

               
Cow position:
               
chr27:24331475-24331706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
273-492
               

               
Cow position:
               
chr27:26087081-26087290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
273-492
               

               
Cow position:
               
chr27:26794023-26793798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
273-492
               

               
Cow position:
               
chr27:31386869-31386644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
273-493
               

               
Cow position:
               
chr27:19508773-19509000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
273-493
               

               
Cow position:
               
chr27:20749241-20749026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
163, 76
               

               
Conread position:
               
273-497
               

               
Cow position:
               
chr27:299613-299390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
155, 53
               

               
Conread position:
               
273-503
               

               
Cow position:
               
chr27:15669013-15668774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
273-504
               

               
Cow position:
               
chr27:23994654-23994422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
273-505
               

               
Cow position:
               
chr27:29597984-29597753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
157, 59
               

               
Conread position:
               
273-507
               

               
Cow position:
               
chr27:12515955-12516192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
273-507
               

               
Cow position:
               
chr27:17397690-17397452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
158, 77
               

               
Conread position:
               
273-507
               

               
Cow position:
               
chr27:23510736-23510989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
88, 160
               

               
Conread position:
               
273-507
               

               
Cow position:
               
chr27:23594080-23594321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
273-507
               

               
Cow position:
               
chr27:30407286-30407035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
273-508
               

               
Cow position:
               
chr27:1637165-1636936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
273-508
               

               
Cow position:
               
chr27:2592298-2592547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
273-508
               

               
Cow position:
               
chr27:18558119-18558358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 226
               

               
Conread position:
               
273-508
               

               
Cow position:
               
chr27:27389266-27389019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
274-380
               

               
Cow position:
               
chr27:31479036-31479144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
274-427
               

               
Cow position:
               
chr27:20561350-20561495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
274-434
               

               
Cow position:
               
chr27:26118259-26118420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 159
               

               
Conread position:
               
274-438
               

               
Cow position:
               
chr27:11982886-11982722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
274-443
               

               
Cow position:
               
chr27:20283406-20283567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
274-449
               

               
Cow position:
               
chr27:26980203-26980027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
74, 159
               

               
Conread position:
               
274-466
               

               
Cow position:
               
chr27:26617177-26617366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
274-471
               

               
Cow position:
               
chr27:6541397-6541597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 73
               

               
Conread position:
               
274-484
               

               
Cow position:
               
chr27:15003217-15003000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
274-486
               

               
Cow position:
               
chr27:18791752-18791535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 161
               

               
Conread position:
               
274-491
               

               
Cow position:
               
chr27:10323606-10323822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
274-507
               

               
Cow position:
               
chr27:22171064-22171299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
275-411
               

               
Cow position:
               
chr27:24693181-24693313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
275-425
               

               
Cow position:
               
chr27:29614805-29614954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
275-471
               

               
Cow position:
               
chr27:23452226-23452426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
155, 78
               

               
Conread position:
               
275-471
               

               
Cow position:
               
chr27:23484979-23485174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
275-487
               

               
Cow position:
               
chr27:26121521-26121741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
275-490
               

               
Cow position:
               
chr27:27740530-27740307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
275-492
               

               
Cow position:
               
chr27:5553235-5553455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
275-501
               

               
Cow position:
               
chr27:22602938-22603175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
275-505
               

               
Cow position:
               
chr27:31373209-31372983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
276-425
               

               
Cow position:
               
chr27:27450119-27449973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
276-507
               

               
Cow position:
               
chr27:26865344-26865119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
176, 75
               

               
Conread position:
               
277-428
               

               
Cow position:
               
chr27:29183461-29183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
277-460
               

               
Cow position:
               
chr27:10581299-10581483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
153, 130
               

               
Conread position:
               
277-481
               

               
Cow position:
               
chr27:9253347-9253142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
154, 76
               

               
Conread position:
               
278-429
               

               
Cow position:
               
chr27:232317-232470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
278-451
               

               
Cow position:
               
chr27:26909822-26909654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
278-455
               

               
Cow position:
               
chr27:31031233-31031396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr27:11435561-11435325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
279-412
               

               
Cow position:
               
chr27:20826030-20825891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
279-501
               

               
Cow position:
               
chr27:29831941-29831700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
280-413
               

               
Cow position:
               
chr27:31231311-31231181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
280-447
               

               
Cow position:
               
chr27:28932034-28931868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
280-447
               

               
Cow position:
               
chr27:29892490-29892661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 142
               

               
Conread position:
               
280-480
               

               
Cow position:
               
chr27:26509388-26509183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
280-507
               

               
Cow position:
               
chr27:23560261-23560031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
281-428
               

               
Cow position:
               
chr27:23177543-23177397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
281-448
               

               
Cow position:
               
chr27:23554560-23554388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
281-454
               

               
Cow position:
               
chr27:15859528-15859350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
281-462
               

               
Cow position:
               
chr27:30997060-30996881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
282-492
               

               
Cow position:
               
chr27:13318207-13317988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
282-493
               

               
Cow position:
               
chr27:6319693-6319906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
282-507
               

               
Cow position:
               
chr27:26188597-26188829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 222
               

               
Conread position:
               
283-470
               

               
Cow position:
               
chr27:26238795-26238989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
284-451
               

               
Cow position:
               
chr27:24755763-24755925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
285-429
               

               
Cow position:
               
chr27:26504077-26504221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
285-507
               

               
Cow position:
               
chr27:19685937-19685712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
285-507
               

               
Cow position:
               
chr27:23890706-23890937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
52, 215
               

               
Conread position:
               
285-508
               

               
Cow position:
               
chr27:19660701-19660934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
285-508
               

               
Cow position:
               
chr27:23108129-23107902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
286-460
               

               
Cow position:
               
chr27:22254564-22254741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 143
               

               
Conread position:
               
287-438
               

               
Cow position:
               
chr27:23060341-23060189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
289-413
               

               
Cow position:
               
chr27:624439-624318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
291-429
               

               
Cow position:
               
chr27:24709333-24709473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
291-473
               

               
Cow position:
               
chr27:20068196-20068010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
291-507
               

               
Cow position:
               
chr27:28478363-28478581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
292-494
               

               
Cow position:
               
chr27:6674048-6674267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 211
               

               
Conread position:
               
301-508
               

               
Cow position:
               
chr27:1768833-1768621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
314-508
               

               
Cow position:
               
chr27:17646363-17646168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
113, 42
               

               
Conread position:
               
316-507
               

               
Cow position:
               
chr27:22418960-22418769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
328-501
               

               
Cow position:
               
chr27:22423330-22423509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
339-501
               

               
Cow position:
               
chr27:17918487-17918317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
340-493
               

               
Cow position:
               
chr27:24305265-24305421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
340-493
               

               
Cow position:
               
chr27:30489583-30489423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
340-508
               

               
Cow position:
               
chr27:6302640-6302463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
341-501
               

               
Cow position:
               
chr27:27673187-27673022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 151
               

               
Conread position:
               
344-508
               

               
Cow position:
               
chr27:20812736-20812905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
361-508
               

               
Cow position:
               
chr27:20497054-20497210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               
Show alignments to all cow chromosomes.