Cow genome map

Conread name: Utr2-C0001801_P03

Conread position: 1-127
Cow position: chr27:27054119-27054243 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 1-145
Cow position: chr27:16332102-16332244 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-159
Cow position: chr27:11256309-11256463 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-165
Cow position: chr27:12239445-12239278 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 140, 53

Conread position: 1-174
Cow position: chr27:27557179-27557005 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 54

Conread position: 1-175
Cow position: chr27:344553-344730 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 141, 53

Conread position: 1-176
Cow position: chr27:9333044-9332876 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 141, 46

Conread position: 1-178
Cow position: chr27:4982749-4982569 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 141, 53

Conread position: 1-178
Cow position: chr27:8201312-8201135 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 141, 53

Conread position: 1-178
Cow position: chr27:8291218-8291040 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 140, 53

Conread position: 1-178
Cow position: chr27:13316936-13316760 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-178
Cow position: chr27:21392387-21392209 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 143, 44

Conread position: 1-178
Cow position: chr27:25971223-25971404 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 53

Conread position: 1-178
Cow position: chr27:29467305-29467127 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 141, 23

Conread position: 1-178
Cow position: chr27:30036248-30036066 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 12, 55

Conread position: 1-180
Cow position: chr27:2681897-2681718 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 170, 58

Conread position: 1-180
Cow position: chr27:6523902-6524083 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 143, 50

Conread position: 1-180
Cow position: chr27:16787921-16788101 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 144, 53

Conread position: 1-180
Cow position: chr27:21451820-21451639 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 150
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 114, 46

Conread position: 1-180
Cow position: chr27:26552017-26552190 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 53

Conread position: 1-183
Cow position: chr27:1189039-1188858 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 46

Conread position: 1-183
Cow position: chr27:2331880-2331695 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 141, 53

Conread position: 1-183
Cow position: chr27:2557616-2557799 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 140, 46

Conread position: 1-183
Cow position: chr27:5914308-5914125 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 145, 45

Conread position: 1-183
Cow position: chr27:5925639-5925465 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 142, 44

Conread position: 1-183
Cow position: chr27:8972821-8972636 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 140, 53

Conread position: 1-183
Cow position: chr27:11481308-11481123 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 142, 53

Conread position: 1-183
Cow position: chr27:13182908-13183080 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 120, 37

Conread position: 1-183
Cow position: chr27:14380680-14380496 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 155
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 141, 16

Conread position: 1-183
Cow position: chr27:15033514-15033699 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 142, 53

Conread position: 1-183
Cow position: chr27:15349034-15348854 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 50

Conread position: 1-183
Cow position: chr27:15633966-15634150 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 141, 53

Conread position: 1-183
Cow position: chr27:15870643-15870818 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 20

Conread position: 1-183
Cow position: chr27:24295883-24296077 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 53

Conread position: 1-183
Cow position: chr27:25112538-25112354 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 47

Conread position: 1-183
Cow position: chr27:25800834-25801013 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 150
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 143, 50

Conread position: 1-183
Cow position: chr27:27291770-27291581 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 109, 53

Conread position: 1-185
Cow position: chr27:8592763-8592571 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 40, 63

Conread position: 1-186
Cow position: chr27:1536546-1536359 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 119, 53

Conread position: 1-200
Cow position: chr27:15405998-15405801 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 46

Conread position: 2-142
Cow position: chr27:24205758-24205897 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 2-174
Cow position: chr27:15871952-15872120 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 47

Conread position: 2-175
Cow position: chr27:8427234-8427057 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 140, 52

Conread position: 2-178
Cow position: chr27:8429381-8429200 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 2-180
Cow position: chr27:14669566-14669392 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 2-183
Cow position: chr27:13901500-13901316 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 139, 52

Conread position: 2-183
Cow position: chr27:15866927-15867103 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 151
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 141, 20

Conread position: 2-183
Cow position: chr27:26330308-26330124 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 140, 52

Conread position: 2-193
Cow position: chr27:3990424-3990617 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 141, 52

Conread position: 3-142
Cow position: chr27:3649856-3649718 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 3-145
Cow position: chr27:17476832-17476973 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 3-155
Cow position: chr27:526310-526155 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 139, 51

Conread position: 3-178
Cow position: chr27:165544-165722 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 141, 51

Conread position: 3-178
Cow position: chr27:4331361-4331543 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 3-178
Cow position: chr27:8959641-8959819 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 138, 51

Conread position: 3-178
Cow position: chr27:20001780-20001613 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 3-178
Cow position: chr27:25799633-25799454 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 42

Conread position: 3-178
Cow position: chr27:30783278-30783101 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 139, 51

Conread position: 3-180
Cow position: chr27:10306493-10306313 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 110

Conread position: 3-180
Cow position: chr27:21350222-21350043 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 149
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 139, 50

Conread position: 3-183
Cow position: chr27:1521049-1520872 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 141, 48

Conread position: 3-183
Cow position: chr27:2001220-2001037 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 139, 51

Conread position: 3-183
Cow position: chr27:3232159-3232342 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 139, 51

Conread position: 3-183
Cow position: chr27:9970546-9970363 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 141, 51

Conread position: 3-183
Cow position: chr27:10579322-10579139 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 141, 51

Conread position: 3-183
Cow position: chr27:12006523-12006340 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 141, 54

Conread position: 3-183
Cow position: chr27:13309019-13308836 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 139, 54

Conread position: 3-183
Cow position: chr27:13353681-13353498 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 139, 51

Conread position: 3-183
Cow position: chr27:14297582-14297399 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 141, 51

Conread position: 3-183
Cow position: chr27:16031022-16031205 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 150
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 139, 51

Conread position: 3-183
Cow position: chr27:19424002-19424185 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 51

Conread position: 3-183
Cow position: chr27:19523334-19523516 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 137, 51

Conread position: 3-183
Cow position: chr27:20810791-20810613 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 3-183
Cow position: chr27:22647257-22647440 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 139, 51

Conread position: 3-183
Cow position: chr27:22797284-22797465 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 136, 51

Conread position: 3-183
Cow position: chr27:26785192-26785014 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 148, 51

Conread position: 3-183
Cow position: chr27:29036007-29036188 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 51

Conread position: 3-183
Cow position: chr27:30306894-30307077 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 139, 51

Conread position: 3-186
Cow position: chr27:5983655-5983841 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 139, 51

Conread position: 5-180
Cow position: chr27:12277483-12277305 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 139, 96

Conread position: 7-178
Cow position: chr27:25885198-25885022 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 40

Conread position: 7-178
Cow position: chr27:27279086-27278908 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 47

Conread position: 7-183
Cow position: chr27:27045550-27045369 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 12, 41

Conread position: 8-183
Cow position: chr27:12282060-12281884 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 147, 45

Conread position: 10-177
Cow position: chr27:27930568-27930406 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 136, 40

Conread position: 12-175
Cow position: chr27:20765111-20764948 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 18

Conread position: 12-176
Cow position: chr27:11434542-11434374 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 16, 35

Conread position: 13-178
Cow position: chr27:15272705-15272871 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 129, 41

Conread position: 13-186
Cow position: chr27:19932203-19932377 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 129, 26

Conread position: 13-200
Cow position: chr27:4828864-4828673 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 40

Conread position: 18-183
Cow position: chr27:5990685-5990854 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 101

Conread position: 19-183
Cow position: chr27:1081804-1081970 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 123, 25

Conread position: 19-183
Cow position: chr27:3653341-3653508 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 125, 35

Conread position: 19-183
Cow position: chr27:9989843-9990011 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 35

Conread position: 22-180
Cow position: chr27:28051429-28051589 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 25

Conread position: 24-178
Cow position: chr27:10383792-10383644 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 25-252
Cow position: chr27:24055059-24054832 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 27

Conread position: 27-177
Cow position: chr27:27469183-27469334 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 27

Conread position: 30-176
Cow position: chr27:8262116-8261969 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 10

Conread position: 42-183
Cow position: chr27:15544351-15544207 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 12

Show alignments to all cow chromosomes.