Non-Coding RNA Search

Cow genome map


           Conread name:
           Utr2-C0001801_P03
        

               Conread position:
               1-108
               

               Cow position:
               chrX:14162381-14162275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-111
               

               Cow position:
               chrX:11855354-11855245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-113
               

               Cow position:
               chrX:865585-865474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-113
               

               Cow position:
               chrX:11950297-11950408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-136
               

               Cow position:
               chrX:17229153-17229020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-140
               

               Cow position:
               chrX:11566103-11565965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-141
               

               Cow position:
               chrX:6279414-6279550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-141
               

               Cow position:
               chrX:35240061-35239922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-153
               

               Cow position:
               chrX:23415506-23415661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               141, 50
               

               Conread position:
               1-154
               

               Cow position:
               chrX:23221854-23222009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               141, 7
               

               Conread position:
               1-154
               

               Cow position:
               chrX:35937887-35938042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-157
               

               Cow position:
               chrX:27704788-27704633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               146, 45
               

               Conread position:
               1-157
               

               Cow position:
               chrX:45400831-45400988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               141, 39
               

               Conread position:
               1-165
               

               Cow position:
               chrX:28156721-28156562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-165
               

               Cow position:
               chrX:37134444-37134611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-170
               

               Cow position:
               chrX:6766546-6766717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               1-171
               

               Cow position:
               chrX:23280213-23280040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-172
               

               Cow position:
               chrX:10301320-10301146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               1-173
               

               Cow position:
               chrX:25282305-25282478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               118, 63
               

               Conread position:
               1-174
               

               Cow position:
               chrX:5354114-5354289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               141, 43
               

               Conread position:
               1-174
               

               Cow position:
               chrX:15121972-15122148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 46
               

               Conread position:
               1-175
               

               Cow position:
               chrX:24109415-24109592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-175
               

               Cow position:
               chrX:40693540-40693720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               1-175
               

               Cow position:
               chrX:41734002-41734171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               125, 50
               

               Conread position:
               1-176
               

               Cow position:
               chrX:22819267-22819089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               148
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               142, 56
               

               Conread position:
               1-176
               

               Cow position:
               chrX:23452256-23452436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               135, 53
               

               Conread position:
               1-177
               

               Cow position:
               chrX:3406153-3406328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               1-177
               

               Cow position:
               chrX:17889671-17889843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               142, 45
               

               Conread position:
               1-177
               

               Cow position:
               chrX:22811079-22810899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-177
               

               Cow position:
               chrX:24292474-24292653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-177
               

               Cow position:
               chrX:32329397-32329219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               142, 45
               

               Conread position:
               1-178
               

               Cow position:
               chrX:1947761-1947932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               142, 21
               

               Conread position:
               1-178
               

               Cow position:
               chrX:2300071-2299895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-178
               

               Cow position:
               chrX:3144818-3144638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               141, 67
               

               Conread position:
               1-178
               

               Cow position:
               chrX:5375088-5375268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-178
               

               Cow position:
               chrX:6406543-6406364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               1-178
               

               Cow position:
               chrX:11744456-11744279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               140, 46
               

               Conread position:
               1-178
               

               Cow position:
               chrX:12310200-12310376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-178
               

               Cow position:
               chrX:17610266-17610446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               135, 63
               

               Conread position:
               1-178
               

               Cow position:
               chrX:18455581-18455761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 46
               

               Conread position:
               1-178
               

               Cow position:
               chrX:20999088-20999258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               141, 29
               

               Conread position:
               1-178
               

               Cow position:
               chrX:21254968-21254788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-178
               

               Cow position:
               chrX:24280109-24279926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-178
               

               Cow position:
               chrX:26508416-26508243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-178
               

               Cow position:
               chrX:27318420-27318240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-178
               

               Cow position:
               chrX:27590841-27591014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               141, 45
               

               Conread position:
               1-178
               

               Cow position:
               chrX:30455432-30455607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-178
               

               Cow position:
               chrX:31261443-31261624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               1-178
               

               Cow position:
               chrX:33803806-33803977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               1-178
               

               Cow position:
               chrX:35024249-35024078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               142, 35
               

               Conread position:
               1-178
               

               Cow position:
               chrX:36839895-36839721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               124, 46
               

               Conread position:
               1-178
               

               Cow position:
               chrX:38218166-38217989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               97, 50
               

               Conread position:
               1-178
               

               Cow position:
               chrX:41791526-41791710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 46
               

               Conread position:
               1-179
               

               Cow position:
               chrX:22118305-22118486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-179
               

               Cow position:
               chrX:44193251-44193428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-180
               

               Cow position:
               chrX:16035325-16035501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 50
               

               Conread position:
               1-180
               

               Cow position:
               chrX:17891735-17891553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               1-180
               

               Cow position:
               chrX:28866823-28867008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 52
               

               Conread position:
               1-180
               

               Cow position:
               chrX:34553933-34553765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-180
               

               Cow position:
               chrX:37118099-37117916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               1-180
               

               Cow position:
               chrX:39352432-39352603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-181
               

               Cow position:
               chrX:158799-158616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               1-182
               

               Cow position:
               chrX:28624572-28624755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               142, 43
               

               Conread position:
               1-183
               

               Cow position:
               chrX:1056197-1056383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               154
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               1-183
               

               Cow position:
               chrX:1550154-1549969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:3361010-3360825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:3649634-3649815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               142, 7
               

               Conread position:
               1-183
               

               Cow position:
               chrX:3652856-3652677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               145, 39
               

               Conread position:
               1-183
               

               Cow position:
               chrX:5248576-5248394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:5280665-5280848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               141, 23
               

               Conread position:
               1-183
               

               Cow position:
               chrX:7551612-7551797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:7572580-7572395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:12145288-12145103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:12178868-12178678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               1-183
               

               Cow position:
               chrX:12465221-12465042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:13406097-13406282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 56
               

               Conread position:
               1-183
               

               Cow position:
               chrX:17782689-17782504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:18193879-18193694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:18244174-18243997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:18950547-18950732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               141, 50
               

               Conread position:
               1-183
               

               Cow position:
               chrX:20953722-20953537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:21226666-21226483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:21389767-21389582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:21415056-21414871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:21582632-21582447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               142, 50
               

               Conread position:
               1-183
               

               Cow position:
               chrX:21833073-21832890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:22493220-22493038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:22538844-22539029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:22579198-22579383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:23022502-23022322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               139, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:23038796-23038980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               1-183
               

               Cow position:
               chrX:23341802-23341987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               141, 45
               

               Conread position:
               1-183
               

               Cow position:
               chrX:23387349-23387529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-183
               

               Cow position:
               chrX:23395796-23395611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               152
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:23572627-23572813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               1-183
               

               Cow position:
               chrX:27095318-27095141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-183
               

               Cow position:
               chrX:27754617-27754432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:27977645-27977828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               142, 45
               

               Conread position:
               1-183
               

               Cow position:
               chrX:29099606-29099423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               152
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:29700754-29700937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:29892276-29892091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:29916156-29916342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               84, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:29942345-29942163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               140, 5
               

               Conread position:
               1-183
               

               Cow position:
               chrX:30060076-30059891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:30135153-30135338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               1-183
               

               Cow position:
               chrX:30165473-30165658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               1-183
               

               Cow position:
               chrX:30180735-30180920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               143, 56
               

               Conread position:
               1-183
               

               Cow position:
               chrX:30199803-30199988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:31202031-31201845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:38150877-38150693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:38852350-38852167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               141, 50
               

               Conread position:
               1-183
               

               Cow position:
               chrX:39548588-39548403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:39697952-39697770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 45
               

               Conread position:
               1-183
               

               Cow position:
               chrX:40184262-40184077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               141, 52
               

               Conread position:
               1-183
               

               Cow position:
               chrX:40827922-40828102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               123, 53
               

               Conread position:
               1-183
               

               Cow position:
               chrX:41156500-41156316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               142, 46
               

               Conread position:
               1-183
               

               Cow position:
               chrX:42222584-42222765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               111, 46
               

               Conread position:
               1-184
               

               Cow position:
               chrX:16782469-16782285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-184
               

               Cow position:
               chrX:26531162-26530976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               1-184
               

               Cow position:
               chrX:29790629-29790812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               1-185
               

               Cow position:
               chrX:27983164-27983349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               138, 53
               

               Conread position:
               1-186
               

               Cow position:
               chrX:27616001-27615815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               136, 45
               

               Conread position:
               1-186
               

               Cow position:
               chrX:28133286-28133101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               142, 50
               

               Conread position:
               1-186
               

               Cow position:
               chrX:39556606-39556786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               1-187
               

               Cow position:
               chrX:47000464-47000655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               143, 88
               

               Conread position:
               1-188
               

               Cow position:
               chrX:6044271-6044459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               146, 53
               

               Conread position:
               1-189
               

               Cow position:
               chrX:13178419-13178610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               1-189
               

               Cow position:
               chrX:41884989-41885180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               145, 50
               

               Conread position:
               1-193
               

               Cow position:
               chrX:35287615-35287421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-194
               

               Cow position:
               chrX:4407072-4406874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               1-194
               

               Cow position:
               chrX:21063662-21063469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               1-195
               

               Cow position:
               chrX:43075072-43074873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               2-140
               

               Cow position:
               chrX:45042618-45042479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               2-173
               

               Cow position:
               chrX:150659-150494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 6
               

               Conread position:
               2-174
               

               Cow position:
               chrX:2649160-2649337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               2-175
               

               Cow position:
               chrX:5320529-5320702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               140, 43
               

               Conread position:
               2-175
               

               Cow position:
               chrX:21626512-21626686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               140, 45
               

               Conread position:
               2-175
               

               Cow position:
               chrX:27450861-27451033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               141, 49
               

               Conread position:
               2-178
               

               Cow position:
               chrX:30089858-30090033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               142, 52
               

               Conread position:
               2-178
               

               Cow position:
               chrX:38228129-38228308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 52
               

               Conread position:
               2-180
               

               Cow position:
               chrX:41847342-41847521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               140, 45
               

               Conread position:
               2-180
               

               Cow position:
               chrX:45373920-45374100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               141, 52
               

               Conread position:
               2-183
               

               Cow position:
               chrX:323102-322918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               140, 52
               

               Conread position:
               2-183
               

               Cow position:
               chrX:4482146-4481971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               140, 48
               

               Conread position:
               2-183
               

               Cow position:
               chrX:4905799-4905983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 52
               

               Conread position:
               2-183
               

               Cow position:
               chrX:5365406-5365593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 52
               

               Conread position:
               2-183
               

               Cow position:
               chrX:10866681-10866857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               140, 46
               

               Conread position:
               2-183
               

               Cow position:
               chrX:15140348-15140527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               142, 45
               

               Conread position:
               2-183
               

               Cow position:
               chrX:26755454-26755635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               141, 48
               

               Conread position:
               2-183
               

               Cow position:
               chrX:28647082-28647266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 49
               

               Conread position:
               2-186
               

               Cow position:
               chrX:24174765-24174948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-108
               

               Cow position:
               chrX:24442052-24442156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               3-108
               

               Cow position:
               chrX:39293031-39293135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               3-113
               

               Cow position:
               chrX:20580480-20580371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               3-113
               

               Cow position:
               chrX:36479448-36479557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-128
               

               Cow position:
               chrX:13031024-13031148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-129
               

               Cow position:
               chrX:27750435-27750310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-142
               

               Cow position:
               chrX:5124172-5124310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-142
               

               Cow position:
               chrX:15113859-15113721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-159
               

               Cow position:
               chrX:3827854-3827697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               3-172
               

               Cow position:
               chrX:15260432-15260604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-173
               

               Cow position:
               chrX:30196485-30196312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-176
               

               Cow position:
               chrX:2813295-2813471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               139, 48
               

               Conread position:
               3-176
               

               Cow position:
               chrX:19608863-19608686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               3-177
               

               Cow position:
               chrX:2486445-2486622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 51
               

               Conread position:
               3-177
               

               Cow position:
               chrX:14125057-14125234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-177
               

               Cow position:
               chrX:22870006-22869829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-177
               

               Cow position:
               chrX:30159803-30159979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 44
               

               Conread position:
               3-177
               

               Cow position:
               chrX:32584744-32584920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               140, 51
               

               Conread position:
               3-178
               

               Cow position:
               chrX:8640975-8640797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-178
               

               Cow position:
               chrX:10059652-10059474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               3-178
               

               Cow position:
               chrX:10445228-10445406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-178
               

               Cow position:
               chrX:14050007-14050184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-178
               

               Cow position:
               chrX:14801632-14801809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-178
               

               Cow position:
               chrX:16711143-16710965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               140, 54
               

               Conread position:
               3-178
               

               Cow position:
               chrX:18222600-18222424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               139, 32
               

               Conread position:
               3-178
               

               Cow position:
               chrX:20675055-20674877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-178
               

               Cow position:
               chrX:23986437-23986259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               139, 43
               

               Conread position:
               3-178
               

               Cow position:
               chrX:25451523-25451347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-178
               

               Cow position:
               chrX:29083254-29083076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               139, 43
               

               Conread position:
               3-178
               

               Cow position:
               chrX:29759875-29759699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-178
               

               Cow position:
               chrX:30053281-30053459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-180
               

               Cow position:
               chrX:620077-620257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:2048299-2048116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               140, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:2103592-2103409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:2293413-2293596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:2500443-2500626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               137, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:2559773-2559956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:2579606-2579423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:3081944-3082130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               3-183
               

               Cow position:
               chrX:3464890-3465070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 22
               

               Conread position:
               3-183
               

               Cow position:
               chrX:4342938-4342755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:4622766-4622949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:5289499-5289680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               3-183
               

               Cow position:
               chrX:5332246-5332427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:5334628-5334809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:5361197-5361014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:5646917-5647100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:5866333-5866150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:6372367-6372184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:6453884-6453701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:6870377-6870560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:7120794-7120611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:7484994-7484811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:7755093-7754910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:8482634-8482452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:8590769-8590584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:9011518-9011335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:9095830-9095647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               140, 43
               

               Conread position:
               3-183
               

               Cow position:
               chrX:9169427-9169601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               139, 44
               

               Conread position:
               3-183
               

               Cow position:
               chrX:9642245-9642428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:10528599-10528780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               3-183
               

               Cow position:
               chrX:11146146-11146330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:11409147-11409330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:11461809-11461989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               136, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:11499589-11499770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:11976259-11976441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               3-183
               

               Cow position:
               chrX:12307575-12307758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:12346083-12345900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:13928555-13928738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:14462502-14462324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               136, 44
               

               Conread position:
               3-183
               

               Cow position:
               chrX:14598033-14597850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:14782158-14782341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:15175365-15175545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               139, 30
               

               Conread position:
               3-183
               

               Cow position:
               chrX:15977766-15977949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:16085471-16085654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:16278839-16278660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:16359820-16360003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:16465488-16465311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:16525977-16525794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:16702858-16702675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:16803680-16803863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:16808627-16808810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:17054756-17054572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               3-183
               

               Cow position:
               chrX:17290367-17290187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:17994646-17994466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:18023805-18023988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:18488527-18488710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               139, 43
               

               Conread position:
               3-183
               

               Cow position:
               chrX:18656618-18656801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:20020766-20020585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:20356808-20356995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:21685806-21685623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               139, 43
               

               Conread position:
               3-183
               

               Cow position:
               chrX:22077155-22077336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:22612590-22612407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:22838459-22838276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:22887847-22887666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               143, 35
               

               Conread position:
               3-183
               

               Cow position:
               chrX:23134777-23134595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               68, 44
               

               Conread position:
               3-183
               

               Cow position:
               chrX:24321440-24321624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               3-183
               

               Cow position:
               chrX:24346236-24346053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:24413217-24413031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:24467937-24468119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 43
               

               Conread position:
               3-183
               

               Cow position:
               chrX:24769669-24769852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:25289492-25289675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:26230571-26230754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:26275325-26275143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               138, 30
               

               Conread position:
               3-183
               

               Cow position:
               chrX:26618311-26618128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:26760381-26760564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:27423096-27423267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-183
               

               Cow position:
               chrX:27498016-27497834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               139, 44
               

               Conread position:
               3-183
               

               Cow position:
               chrX:27758896-27758713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:28058509-28058326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:28503523-28503340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:28588158-28587976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:29225665-29225482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:29908015-29908198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:29912526-29912345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:30836574-30836391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:30964799-30964982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:31495923-31495741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:31978654-31978836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:32643673-32643490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:33685318-33685135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:33763332-33763149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:34094893-34094710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:34761253-34761070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:35533041-35532859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 41
               

               Conread position:
               3-183
               

               Cow position:
               chrX:36535544-36535725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               139, 48
               

               Conread position:
               3-183
               

               Cow position:
               chrX:36729571-36729388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               3-183
               

               Cow position:
               chrX:37080331-37080511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               139, 44
               

               Conread position:
               3-183
               

               Cow position:
               chrX:37404047-37404225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 43
               

               Conread position:
               3-183
               

               Cow position:
               chrX:37852323-37852142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:38231080-38231263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:38961663-38961846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               138, 43
               

               Conread position:
               3-183
               

               Cow position:
               chrX:39185360-39185177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:39560472-39560655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               3-183
               

               Cow position:
               chrX:39713738-39713555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-183
               

               Cow position:
               chrX:39730952-39731133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               141, 20
               

               Conread position:
               3-183
               

               Cow position:
               chrX:46296848-46296666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               3-185
               

               Cow position:
               chrX:16046334-16046150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               3-185
               

               Cow position:
               chrX:28753149-28753334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               3-185
               

               Cow position:
               chrX:29880093-29880276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 44
               

               Conread position:
               3-186
               

               Cow position:
               chrX:12360075-12359889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               138, 43
               

               Conread position:
               3-186
               

               Cow position:
               chrX:16086936-16087122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               123, 51
               

               Conread position:
               3-186
               

               Cow position:
               chrX:30228926-30229112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               140, 51
               

               Conread position:
               3-189
               

               Cow position:
               chrX:6581122-6580932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               3-195
               

               Cow position:
               chrX:39939566-39939761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               3-234
               

               Cow position:
               chrX:5392388-5392621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 48
               

               Conread position:
               4-142
               

               Cow position:
               chrX:42466808-42466942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-173
               

               Cow position:
               chrX:34993365-34993193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               109, 43
               

               Conread position:
               4-174
               

               Cow position:
               chrX:30164052-30164225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               4-180
               

               Cow position:
               chrX:1617048-1617226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               4-180
               

               Cow position:
               chrX:10412789-10412968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               4-183
               

               Cow position:
               chrX:15621345-15621527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               4-185
               

               Cow position:
               chrX:3417950-3418134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               5-174
               

               Cow position:
               chrX:24317009-24316835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               5-178
               

               Cow position:
               chrX:17663731-17663905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               137, 41
               

               Conread position:
               5-183
               

               Cow position:
               chrX:671808-671989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               137, 49
               

               Conread position:
               5-183
               

               Cow position:
               chrX:16040494-16040675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 41
               

               Conread position:
               5-183
               

               Cow position:
               chrX:19398963-19398782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               137, 49
               

               Conread position:
               5-183
               

               Cow position:
               chrX:27305114-27304933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               139, 49
               

               Conread position:
               5-183
               

               Cow position:
               chrX:32063983-32064164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               138, 49
               

               Conread position:
               5-183
               

               Cow position:
               chrX:36692015-36691842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               5-183
               

               Cow position:
               chrX:40225055-40225230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               137, 49
               

               Conread position:
               5-185
               

               Cow position:
               chrX:30681319-30681498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               137, 42
               

               Conread position:
               6-182
               

               Cow position:
               chrX:22125671-22125850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               7-176
               

               Cow position:
               chrX:40070428-40070592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               136, 47
               

               Conread position:
               7-179
               

               Cow position:
               chrX:29288181-29288006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               75, 40
               

               Conread position:
               7-183
               

               Cow position:
               chrX:3372669-3372848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               137, 47
               

               Conread position:
               7-183
               

               Cow position:
               chrX:13031468-13031646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               135, 38
               

               Conread position:
               8-178
               

               Cow position:
               chrX:2382650-2382475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               8-178
               

               Cow position:
               chrX:20792324-20792148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               114, 45
               

               Conread position:
               8-183
               

               Cow position:
               chrX:9763889-9764067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               134, 49
               

               Conread position:
               8-183
               

               Cow position:
               chrX:13206137-13205959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               134, 46
               

               Conread position:
               8-183
               

               Cow position:
               chrX:29930210-29930388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               134, 49
               

               Conread position:
               8-183
               

               Cow position:
               chrX:42733054-42732876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               135, 46
               

               Conread position:
               9-175
               

               Cow position:
               chrX:3155401-3155569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 38
               

               Conread position:
               9-178
               

               Cow position:
               chrX:21592472-21592302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               111, 38
               

               Conread position:
               9-184
               

               Cow position:
               chrX:41879748-41879916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               10-175
               

               Cow position:
               chrX:2008518-2008686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 44
               

               Conread position:
               10-176
               

               Cow position:
               chrX:4767875-4767707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               132, 44
               

               Conread position:
               10-176
               

               Cow position:
               chrX:6235670-6235837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               10-183
               

               Cow position:
               chrX:26447264-26447096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               133, 12
               

               Conread position:
               10-185
               

               Cow position:
               chrX:21818285-21818453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               132, 8
               

               Conread position:
               10-185
               

               Cow position:
               chrX:29849444-29849621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               10-186
               

               Cow position:
               chrX:24483182-24483361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               10-199
               

               Cow position:
               chrX:44874317-44874512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               11-178
               

               Cow position:
               chrX:28557544-28557375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               11-183
               

               Cow position:
               chrX:9899159-9899332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               11-185
               

               Cow position:
               chrX:31728647-31728469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               12-151
               

               Cow position:
               chrX:15039893-15040031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               12-173
               

               Cow position:
               chrX:6854540-6854704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               12-178
               

               Cow position:
               chrX:12996732-12996901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               143
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               130, 42
               

               Conread position:
               12-185
               

               Cow position:
               chrX:26442073-26442248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               128, 42
               

               Conread position:
               13-169
               

               Cow position:
               chrX:21662219-21662060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               129, 41
               

               Conread position:
               13-178
               

               Cow position:
               chrX:20800968-20800798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               13-180
               

               Cow position:
               chrX:11074008-11074176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               13-183
               

               Cow position:
               chrX:44053993-44053820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               14-183
               

               Cow position:
               chrX:21343571-21343399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               128, 40
               

               Conread position:
               15-177
               

               Cow position:
               chrX:38330559-38330394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               127, 36
               

               Conread position:
               19-183
               

               Cow position:
               chrX:7096629-7096463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               19-183
               

               Cow position:
               chrX:8435031-8435195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               19-183
               

               Cow position:
               chrX:19473977-19474144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               19-183
               

               Cow position:
               chrX:21767971-21767804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               19-183
               

               Cow position:
               chrX:21793761-21793594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               123, 32
               

               Conread position:
               19-183
               

               Cow position:
               chrX:22564514-22564679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               19-183
               

               Cow position:
               chrX:24588563-24588730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               19-183
               

               Cow position:
               chrX:25573523-25573356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               122, 35
               

               Conread position:
               19-183
               

               Cow position:
               chrX:30172535-30172702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               123, 40
               

               Conread position:
               19-183
               

               Cow position:
               chrX:32145084-32145251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               20-183
               

               Cow position:
               chrX:9128226-9128059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               21-178
               

               Cow position:
               chrX:29047284-29047124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               22-183
               

               Cow position:
               chrX:10438739-10438901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               25-180
               

               Cow position:
               chrX:9227737-9227895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               25-183
               

               Cow position:
               chrX:24447119-24446958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               25-183
               

               Cow position:
               chrX:30435452-30435614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               25-184
               

               Cow position:
               chrX:20742018-20741856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               117, 29
               

               Conread position:
               25-185
               

               Cow position:
               chrX:24734832-24734666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 95
               

               Conread position:
               26-183
               

               Cow position:
               chrX:2479464-2479624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               26-185
               

               Cow position:
               chrX:21750081-21750240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 28
               

               Conread position:
               27-186
               

               Cow position:
               chrX:28518557-28518719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               30-178
               

               Cow position:
               chrX:6655860-6656009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               113, 24
               

               Conread position:
               30-185
               

               Cow position:
               chrX:16854205-16854363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               113, 24
               

               Conread position:
               37-201
               

               Cow position:
               chrX:36195249-36195080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               38-183
               

               Cow position:
               chrX:24928190-24928338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               44-183
               

               Cow position:
               chrX:5294200-5294343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               45-174
               

               Cow position:
               chrX:28765962-28766095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               50-183
               

               Cow position:
               chrX:2932861-2932998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               53-183
               

               Cow position:
               chrX:29842041-29842174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               90, 29
               

               Conread position:
               54-183
               

               Cow position:
               chrX:21892645-21892512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               57-183
               

               Cow position:
               chrX:27595092-27595222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               57-183
               

               Cow position:
               chrX:37815312-37815184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               67-185
               

               Cow position:
               chrX:16046097-16045975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               69-183
               

               Cow position:
               chrX:22616249-22616367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               71-183
               

               Cow position:
               chrX:29170661-29170777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-108
Cow position:	chrX:14162381-14162275 (view UCSC Genome Browser custom track)
Alignm length:	108
Alignm identity:	89
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	53, 0
Conread position:	1-111
Cow position:	chrX:11855354-11855245 (view UCSC Genome Browser custom track)
Alignm length:	111
Alignm identity:	91
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	46, 0
Conread position:	1-113
Cow position:	chrX:865585-865474 (view UCSC Genome Browser custom track)
Alignm length:	113
Alignm identity:	91
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	46, 0
Conread position:	1-136
Cow position:	chrX:17229153-17229020 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	108
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	52, 0
Conread position:	1-140
Cow position:	chrX:11566103-11565965 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	108
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	53, 0
Conread position:	1-141
Cow position:	chrX:6279414-6279550 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	108
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	52, 0
Conread position:	1-153
Cow position:	chrX:23415506-23415661 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	122
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	141, 50
Conread position:	1-154
Cow position:	chrX:23221854-23222009 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	127
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	141, 7
Conread position:	1-157
Cow position:	chrX:27704788-27704633 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	120
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	146, 45
Conread position:	1-165
Cow position:	chrX:28156721-28156562 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	127
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	141, 46
Conread position:	1-170
Cow position:	chrX:6766546-6766717 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	131
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	25, 11
Conread position:	1-171
Cow position:	chrX:23280213-23280040 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	137
Alignm E-value:	9e-35
Alignm gaps (pig, cow):	141, 46
Conread position:	1-172
Cow position:	chrX:10301320-10301146 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	142
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	50, 17
Conread position:	1-173
Cow position:	chrX:25282305-25282478 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	125
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	118, 63
Conread position:	1-174
Cow position:	chrX:5354114-5354289 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	136
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	141, 43
Conread position:	1-175
Cow position:	chrX:24109415-24109592 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	134
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	142, 53
Conread position:	1-176
Cow position:	chrX:22819267-22819089 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	148
Alignm E-value:	7.00649e-43
Alignm gaps (pig, cow):	142, 56
Conread position:	1-177
Cow position:	chrX:3406153-3406328 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	133
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	67, 46
Conread position:	1-178
Cow position:	chrX:1947761-1947932 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	139
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	142, 21
Conread position:	1-179
Cow position:	chrX:22118305-22118486 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	141
Alignm E-value:	9e-35
Alignm gaps (pig, cow):	142, 53