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Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
2-357
               

               
Cow position:
               
chr10:61511271-61510932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr10:29188265-29188643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 245
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr10:8934558-8934204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 45
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr10:39228232-39227878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 263
               

               
Conread position:
               
9-197
               

               
Cow position:
               
chr10:55395895-55396084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
136, 159
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr10:46327772-46327556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 133
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr10:17022485-17022723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr10:38376578-38376818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
9-265
               

               
Cow position:
               
chr10:4164351-4164093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr10:48573598-48573872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr10:44421824-44422085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
141, 68
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr10:3362708-3362397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 197
               

               
Conread position:
               
9-367
               

               
Cow position:
               
chr10:31027561-31027912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr10:25699731-25699387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
139, 127
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr10:1978590-1978946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 144
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr10:11213193-11212830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 98
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr10:22390678-22390314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 155
               

               
Conread position:
               
10-369
               

               
Cow position:
               
chr10:29588762-29589115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
215, 10
               

               
Conread position:
               
10-370
               

               
Cow position:
               
chr10:18042260-18041911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 141
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr10:19104103-19104465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 80
               

               
Conread position:
               
11-375
               

               
Cow position:
               
chr10:54504684-54504323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr10:49146594-49146251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 128
               

               
Conread position:
               
14-379
               

               
Cow position:
               
chr10:52569667-52569312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
14-379
               

               
Cow position:
               
chr10:64876595-64876234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
22-378
               

               
Cow position:
               
chr10:23056009-23056360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 242
               

               
Conread position:
               
23-379
               

               
Cow position:
               
chr10:54477168-54476829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 18
               

               
Conread position:
               
25-426
               

               
Cow position:
               
chr10:24756477-24756068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 114
               

               
Conread position:
               
26-364
               

               
Cow position:
               
chr10:59571966-59571629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 90
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr10:15309340-15309534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
28-333
               

               
Cow position:
               
chr10:28152316-28152619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 142
               

               
Conread position:
               
30-251
               

               
Cow position:
               
chr10:31116736-31116527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
152, 112
               

               
Conread position:
               
30-379
               

               
Cow position:
               
chr10:42745978-42745630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 217
               

               
Conread position:
               
32-173
               

               
Cow position:
               
chr10:6252438-6252581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr10:29379900-29380096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
32-373
               

               
Cow position:
               
chr10:21657479-21657144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 31
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr10:20095823-20095473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 240
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr10:22527843-22528184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 95
               

               
Conread position:
               
33-182
               

               
Cow position:
               
chr10:53405530-53405384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
33-250
               

               
Cow position:
               
chr10:6543783-6543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
33-259
               

               
Cow position:
               
chr10:67288348-67288127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
33-279
               

               
Cow position:
               
chr10:4184253-4184006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 125
               

               
Conread position:
               
33-342
               

               
Cow position:
               
chr10:64042142-64041838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
33-356
               

               
Cow position:
               
chr10:28395244-28395551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
33-368
               

               
Cow position:
               
chr10:28105022-28105344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 80
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr10:28038876-28039210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
121, 235
               

               
Conread position:
               
33-378
               

               
Cow position:
               
chr10:3998963-3998627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 224
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr10:13586761-13586431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 107
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr10:24732361-24732031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr10:48741102-48741440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr10:40163877-40164165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 108
               

               
Conread position:
               
34-352
               

               
Cow position:
               
chr10:22341634-22341310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 206
               

               
Conread position:
               
34-363
               

               
Cow position:
               
chr10:59151808-59152130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
178, 106
               

               
Conread position:
               
34-373
               

               
Cow position:
               
chr10:64285738-64286073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 134
               

               
Conread position:
               
34-375
               

               
Cow position:
               
chr10:1488888-1488571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
319, 99
               

               
Conread position:
               
34-376
               

               
Cow position:
               
chr10:21447853-21448173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr10:59588119-59588448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
35-347
               

               
Cow position:
               
chr10:10964044-10963736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
35-370
               

               
Cow position:
               
chr10:63276449-63276117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 75
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr10:62353511-62353183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
39-392
               

               
Cow position:
               
chr10:24763534-24763183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
39-405
               

               
Cow position:
               
chr10:6530237-6529890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 97
               

               
Conread position:
               
41-171
               

               
Cow position:
               
chr10:43586235-43586368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
41-179
               

               
Cow position:
               
chr10:17293382-17293523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
41-197
               

               
Cow position:
               
chr10:3364133-3364289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
41-198
               

               
Cow position:
               
chr10:48407187-48407030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 141
               

               
Conread position:
               
41-199
               

               
Cow position:
               
chr10:22888765-22888924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
41-203
               

               
Cow position:
               
chr10:49947831-49947990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 137
               

               
Conread position:
               
41-207
               

               
Cow position:
               
chr10:6199069-6198901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
41-219
               

               
Cow position:
               
chr10:7383564-7383739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr10:8449554-8449367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr10:27118919-27119098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
41-223
               

               
Cow position:
               
chr10:4151588-4151414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
41-226
               

               
Cow position:
               
chr10:37068366-37068548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr10:69997751-69997945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr10:6384580-6384385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr10:61922094-61922289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
41-248
               

               
Cow position:
               
chr10:33116902-33117108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
41-250
               

               
Cow position:
               
chr10:28776400-28776191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
41-279
               

               
Cow position:
               
chr10:52695677-52695914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 226
               

               
Conread position:
               
41-285
               

               
Cow position:
               
chr10:2613416-2613175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
41-285
               

               
Cow position:
               
chr10:68829235-68829472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
191, 98
               

               
Conread position:
               
41-288
               

               
Cow position:
               
chr10:47651348-47651108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 136
               

               
Conread position:
               
41-292
               

               
Cow position:
               
chr10:24781238-24780989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 225
               

               
Conread position:
               
41-302
               

               
Cow position:
               
chr10:35778851-35779110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 225
               

               
Conread position:
               
41-320
               

               
Cow position:
               
chr10:7817157-7816885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 159
               

               
Conread position:
               
41-329
               

               
Cow position:
               
chr10:6436109-6435827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
188, 225
               

               
Conread position:
               
41-346
               

               
Cow position:
               
chr10:37668106-37668409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 226
               

               
Conread position:
               
41-346
               

               
Cow position:
               
chr10:50558875-50559176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 81
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr10:35791975-35791674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr10:39875104-39875404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
41-361
               

               
Cow position:
               
chr10:60960984-60960676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
188, 101
               

               
Conread position:
               
41-366
               

               
Cow position:
               
chr10:17863635-17863314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr10:11081013-11080683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 226
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr10:30523013-30523331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 223
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr10:2462440-2462753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr10:14947304-14946988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr10:24744595-24744279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
105, 135
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr10:37818507-37818838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr10:38942481-38942147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 96
               

               
Conread position:
               
41-377
               

               
Cow position:
               
chr10:5151395-5151065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr10:10148698-10148364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 90
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:15889523-15889207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 96
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:20132479-20132810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 110
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:21422110-21422437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:27828371-27828048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
307, 98
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:31362164-31362492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 86
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:31400849-31401181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 51
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:33665892-33665557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 229
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:35902906-35903227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
317, 105
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:37529216-37529552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:38014416-38014090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 225
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:46195832-46195511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:49038634-49038277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
107, 203
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:53674875-53674540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 140
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:57461406-57461083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 30
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr10:65423854-65424194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 96
               

               
Conread position:
               
41-387
               

               
Cow position:
               
chr10:56828268-56828613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 86
               

               
Conread position:
               
41-388
               

               
Cow position:
               
chr10:6489921-6489574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 226
               

               
Conread position:
               
41-392
               

               
Cow position:
               
chr10:6505401-6505065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 90
               

               
Conread position:
               
45-285
               

               
Cow position:
               
chr10:4148535-4148288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 235
               

               
Conread position:
               
45-285
               

               
Cow position:
               
chr10:48513036-48513275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 112
               

               
Conread position:
               
45-347
               

               
Cow position:
               
chr10:47773773-47773484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
45-356
               

               
Cow position:
               
chr10:65071357-65071052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
188, 97
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr10:24096327-24096662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 189
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr10:27716795-27717121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr10:29070202-29069873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
155, 98
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr10:31466792-31466461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 95
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr10:30352895-30352556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
46-177
               

               
Cow position:
               
chr10:37768349-37768215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
46-252
               

               
Cow position:
               
chr10:19191798-19191615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
46-266
               

               
Cow position:
               
chr10:37295628-37295838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
46-290
               

               
Cow position:
               
chr10:22433865-22434116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 229
               

               
Conread position:
               
46-318
               

               
Cow position:
               
chr10:35245902-35246164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr10:46492950-46493229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 210
               

               
Conread position:
               
46-336
               

               
Cow position:
               
chr10:37415834-37415546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 193
               

               
Conread position:
               
46-352
               

               
Cow position:
               
chr10:29252208-29251907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
46-367
               

               
Cow position:
               
chr10:43509044-43508728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
46-369
               

               
Cow position:
               
chr10:805235-804922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
46-373
               

               
Cow position:
               
chr10:2449395-2449075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 157
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr10:10720628-10720959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr10:12392562-12392882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr10:19372292-19372611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
110, 93
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr10:41802855-41803178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 106
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr10:45770092-45769758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr10:52046915-52046583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
51, 221
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr10:54848822-54848495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr10:55733565-55733882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr10:8093272-8093603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 113
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr10:51944406-51944075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
46-392
               

               
Cow position:
               
chr10:1428084-1427747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
46-395
               

               
Cow position:
               
chr10:53934708-53935036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 45
               

               
Conread position:
               
47-206
               

               
Cow position:
               
chr10:61509900-61510056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
47-232
               

               
Cow position:
               
chr10:53076157-53075980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
47-375
               

               
Cow position:
               
chr10:15462535-15462219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 220
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr10:37235509-37235834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr10:58259481-58259798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
48-307
               

               
Cow position:
               
chr10:45679060-45678803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 90
               

               
Conread position:
               
48-309
               

               
Cow position:
               
chr10:69564643-69564390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr10:43531309-43531026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
48, 216
               

               
Conread position:
               
48-357
               

               
Cow position:
               
chr10:45378962-45379266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
103, 91
               

               
Conread position:
               
48-358
               

               
Cow position:
               
chr10:28176346-28176653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
48-362
               

               
Cow position:
               
chr10:25866-25562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 128
               

               
Conread position:
               
48-367
               

               
Cow position:
               
chr10:46004305-46003988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
48-371
               

               
Cow position:
               
chr10:37014676-37014364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 145
               

               
Conread position:
               
48-371
               

               
Cow position:
               
chr10:39398474-39398793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
185, 109
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr10:15318927-15318609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 218
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr10:37512196-37512525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr10:2974044-2974368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr10:6719936-6719623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr10:39939390-39939708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
185, 109
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr10:9083344-9083017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:1423873-1423549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
176, 89
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:5889720-5890053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 219
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:8923322-8922987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 219
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:13368395-13368068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 111
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:17073322-17073635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:17844809-17844486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 140
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:31004974-31005325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:34430183-34430497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
175, 91
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:50109861-50110186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:56080129-56080456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:57786381-57786054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr10:59675212-59675535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 98
               

               
Conread position:
               
48-389
               

               
Cow position:
               
chr10:16645144-16645487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 221
               

               
Conread position:
               
48-390
               

               
Cow position:
               
chr10:33891041-33891381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 212
               

               
Conread position:
               
48-422
               

               
Cow position:
               
chr10:23886417-23886774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 105
               

               
Conread position:
               
48-425
               

               
Cow position:
               
chr10:24312844-24313229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
180, 106
               

               
Conread position:
               
48-426
               

               
Cow position:
               
chr10:25912753-25912374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
49-221
               

               
Cow position:
               
chr10:52881577-52881750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
49-371
               

               
Cow position:
               
chr10:26577591-26577275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr10:13391006-13391332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 122
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr10:15293307-15292993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
179, 91
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr10:62286598-62286273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 210
               

               
Conread position:
               
49-378
               

               
Cow position:
               
chr10:6408001-6407674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr10:16598730-16598406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 129
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr10:16740024-16740338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
180, 81
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr10:27749714-27749392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
184, 90
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr10:41408316-41408004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr10:4109629-4109411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 101
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr10:35653711-35653469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 144
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr10:11623956-11623717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr10:13163408-13163687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 102
               

               
Conread position:
               
50-347
               

               
Cow position:
               
chr10:31779228-31779518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
101, 192
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr10:10135027-10134696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 233
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr10:63940811-63940495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
51-296
               

               
Cow position:
               
chr10:10120232-10119996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
51-375
               

               
Cow position:
               
chr10:33215843-33215518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 217
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr10:58451332-58451513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr10:7366745-7367066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 63
               

               
Conread position:
               
53-365
               

               
Cow position:
               
chr10:22520124-22520434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 210
               

               
Conread position:
               
54-343
               

               
Cow position:
               
chr10:32029796-32030070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr10:23346268-23346396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr10:25260290-25260107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
61-356
               

               
Cow position:
               
chr10:50609572-50609278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
67-378
               

               
Cow position:
               
chr10:54731045-54730730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
105, 84
               

               
Conread position:
               
77-235
               

               
Cow position:
               
chr10:59159082-59159242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
81-373
               

               
Cow position:
               
chr10:41941566-41941857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
81-378
               

               
Cow position:
               
chr10:55580264-55580544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               
Show alignments to all cow chromosomes.