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Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
2-313
               

               
Cow position:
               
chr13:17338300-17338611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr13:52228229-52227890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr13:33875547-33875902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr13:20814399-20814036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr13:44626240-44626624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 159
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr13:52283783-52284153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 213
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr13:61047085-61047450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
3-386
               

               
Cow position:
               
chr13:19610690-19610329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
141, 72
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr13:24230091-24230413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
227, 134
               

               
Conread position:
               
7-379
               

               
Cow position:
               
chr13:22085868-22085513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 249
               

               
Conread position:
               
8-147
               

               
Cow position:
               
chr13:56535334-56535473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
8-193
               

               
Cow position:
               
chr13:20314743-20314555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr13:34263490-34263137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
8-375
               

               
Cow position:
               
chr13:23856090-23856455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 99
               

               
Conread position:
               
8-379
               

               
Cow position:
               
chr13:311317-311674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 77
               

               
Conread position:
               
8-379
               

               
Cow position:
               
chr13:37484400-37484026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 157
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr13:20217518-20217260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr13:20473802-20473515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
9-355
               

               
Cow position:
               
chr13:20839446-20839786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
9-362
               

               
Cow position:
               
chr13:17439888-17439539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 71
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr13:23478910-23479269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 167
               

               
Conread position:
               
9-378
               

               
Cow position:
               
chr13:19883156-19882793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr13:6079532-6079175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr13:20666506-20666144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr13:20784470-20784832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 191
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr13:34281559-34281924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr13:20679220-20679551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 148
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr13:26261905-26261550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 5
               

               
Conread position:
               
10-389
               

               
Cow position:
               
chr13:25062296-25062666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
12-379
               

               
Cow position:
               
chr13:11821038-11821384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
13-379
               

               
Cow position:
               
chr13:20816205-20816557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
14-266
               

               
Cow position:
               
chr13:21269696-21269443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
14-379
               

               
Cow position:
               
chr13:19023962-19023595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
14-379
               

               
Cow position:
               
chr13:41919270-41918922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
126, 9
               

               
Conread position:
               
26-214
               

               
Cow position:
               
chr13:48862198-48862011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
28-379
               

               
Cow position:
               
chr13:13501719-13501378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
28-379
               

               
Cow position:
               
chr13:23960903-23960562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 61
               

               
Conread position:
               
30-372
               

               
Cow position:
               
chr13:46324889-46324551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
6, 235
               

               
Conread position:
               
30-379
               

               
Cow position:
               
chr13:58043527-58043872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 204
               

               
Conread position:
               
32-228
               

               
Cow position:
               
chr13:46329703-46329505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
32-364
               

               
Cow position:
               
chr13:43479963-43480290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
32-378
               

               
Cow position:
               
chr13:17292228-17291888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
33-234
               

               
Cow position:
               
chr13:7265216-7265020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
33-281
               

               
Cow position:
               
chr13:18696743-18696991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 129
               

               
Conread position:
               
33-313
               

               
Cow position:
               
chr13:5758438-5758168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
121, 222
               

               
Conread position:
               
33-313
               

               
Cow position:
               
chr13:15110218-15110501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
114, 238
               

               
Conread position:
               
33-360
               

               
Cow position:
               
chr13:15192982-15192669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
320, 53
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr13:34261135-34261459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr13:1043065-1042718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 244
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr13:6061104-6060770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 140
               

               
Conread position:
               
33-374
               

               
Cow position:
               
chr13:2413934-2414264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
195, 22
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr13:13176554-13176889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 220
               

               
Conread position:
               
33-378
               

               
Cow position:
               
chr13:15233830-15234153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr13:8524714-8524377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 178
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr13:17622192-17622528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 118
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr13:24753791-24754128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
195, 109
               

               
Conread position:
               
33-388
               

               
Cow position:
               
chr13:21176417-21176071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 13
               

               
Conread position:
               
34-203
               

               
Cow position:
               
chr13:9981935-9981767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
34-373
               

               
Cow position:
               
chr13:21275764-21276093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 119
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr13:18166637-18166974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 227
               

               
Conread position:
               
34-386
               

               
Cow position:
               
chr13:15885117-15884763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 236
               

               
Conread position:
               
38-355
               

               
Cow position:
               
chr13:9593414-9593726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
111, 225
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr13:20606208-20605875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
102, 157
               

               
Conread position:
               
39-313
               

               
Cow position:
               
chr13:7488451-7488720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
184, 52
               

               
Conread position:
               
39-379
               

               
Cow position:
               
chr13:41806682-41807019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 234
               

               
Conread position:
               
41-172
               

               
Cow position:
               
chr13:55494614-55494477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
41-178
               

               
Cow position:
               
chr13:17611640-17611501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 119
               

               
Conread position:
               
41-188
               

               
Cow position:
               
chr13:35557199-35557046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr13:13196151-13196323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr13:50751144-50750961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
41-234
               

               
Cow position:
               
chr13:8355117-8355302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr13:19320444-19320646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
41-248
               

               
Cow position:
               
chr13:15194823-15194613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
41-248
               

               
Cow position:
               
chr13:19279007-19279209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
41-250
               

               
Cow position:
               
chr13:34555916-34555711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
41-266
               

               
Cow position:
               
chr13:11381811-11381585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
105, 142
               

               
Conread position:
               
41-266
               

               
Cow position:
               
chr13:48375721-48375508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr13:51116112-51115887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 132
               

               
Conread position:
               
41-275
               

               
Cow position:
               
chr13:18058338-18058103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 216
               

               
Conread position:
               
41-278
               

               
Cow position:
               
chr13:8374860-8374626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
41-279
               

               
Cow position:
               
chr13:5671674-5671445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
41-283
               

               
Cow position:
               
chr13:54389109-54388870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 203
               

               
Conread position:
               
41-286
               

               
Cow position:
               
chr13:14576125-14576364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
209, 83
               

               
Conread position:
               
41-289
               

               
Cow position:
               
chr13:49507939-49507692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 102
               

               
Conread position:
               
41-297
               

               
Cow position:
               
chr13:54582786-54583042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
41-298
               

               
Cow position:
               
chr13:17569189-17568932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
41-301
               

               
Cow position:
               
chr13:15902936-15903182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
41-313
               

               
Cow position:
               
chr13:49022956-49022693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
41-313
               

               
Cow position:
               
chr13:52055680-52055419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
41-343
               

               
Cow position:
               
chr13:48597821-48598111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
41-350
               

               
Cow position:
               
chr13:151875-152165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
41-352
               

               
Cow position:
               
chr13:37803803-37804095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr13:10845516-10845813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr13:13320709-13320996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
41-358
               

               
Cow position:
               
chr13:18172248-18172561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 226
               

               
Conread position:
               
41-359
               

               
Cow position:
               
chr13:18491508-18491817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
41-372
               

               
Cow position:
               
chr13:43184969-43184635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 213
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr13:24585959-24586285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr13:20706293-20705960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr13:34941738-34941414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 61
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:10929076-10928746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:12574546-12574878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:15166730-15167062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:21242172-21241848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 139
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:21288173-21287846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 99
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:23270293-23269969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 55
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:30798634-30798965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 231
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:38329528-38329874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 234
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:43762080-43762411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 146
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:47007807-47007494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:51940646-51940973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
108, 221
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr13:54702098-54702434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 225
               

               
Conread position:
               
41-380
               

               
Cow position:
               
chr13:6086981-6086656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr13:11460545-11460872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr13:53573881-53574206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
41-387
               

               
Cow position:
               
chr13:31813788-31814121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 90
               

               
Conread position:
               
43-302
               

               
Cow position:
               
chr13:13954479-13954222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
97, 229
               

               
Conread position:
               
43-371
               

               
Cow position:
               
chr13:55316277-55315953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 224
               

               
Conread position:
               
44-265
               

               
Cow position:
               
chr13:62518415-62518196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 98
               

               
Conread position:
               
44-379
               

               
Cow position:
               
chr13:34375174-34375499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
86, 232
               

               
Conread position:
               
44-379
               

               
Cow position:
               
chr13:61977046-61976721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
45-247
               

               
Cow position:
               
chr13:27550655-27550857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 113
               

               
Conread position:
               
45-283
               

               
Cow position:
               
chr13:14879035-14878796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
163, 181
               

               
Conread position:
               
45-302
               

               
Cow position:
               
chr13:28689383-28689636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
45-312
               

               
Cow position:
               
chr13:23651359-23651608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
45-325
               

               
Cow position:
               
chr13:14771368-14771650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 225
               

               
Conread position:
               
45-337
               

               
Cow position:
               
chr13:61188449-61188736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
45-342
               

               
Cow position:
               
chr13:37818835-37818551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
45-356
               

               
Cow position:
               
chr13:5263365-5263066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
189, 108
               

               
Conread position:
               
45-364
               

               
Cow position:
               
chr13:13338772-13339091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 109
               

               
Conread position:
               
45-365
               

               
Cow position:
               
chr13:43869197-43868890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 127
               

               
Conread position:
               
45-366
               

               
Cow position:
               
chr13:12045422-12045104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 165
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr13:8202950-8202642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
184, 84
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr13:23167185-23166854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 225
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr13:6616843-6616504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr13:19364156-19364488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr13:20879908-20879591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr13:30651104-30651419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
313, 94
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr13:34507802-34508120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
184, 95
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr13:40651850-40652177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
109, 117
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr13:60509204-60508867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
93, 131
               

               
Conread position:
               
45-388
               

               
Cow position:
               
chr13:20562909-20563251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
45-401
               

               
Cow position:
               
chr13:45604500-45604152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
104, 95
               

               
Conread position:
               
46-200
               

               
Cow position:
               
chr13:29123221-29123376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
46-214
               

               
Cow position:
               
chr13:20871301-20871474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
46-362
               

               
Cow position:
               
chr13:11060905-11061214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 105
               

               
Conread position:
               
46-362
               

               
Cow position:
               
chr13:46181709-46182014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 96
               

               
Conread position:
               
46-374
               

               
Cow position:
               
chr13:20820912-20820602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr13:15289004-15288683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr13:55674291-55673962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 107
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr13:971980-971654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr13:3315758-3315429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 93
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr13:18243779-18244100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
182, 87
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr13:25817444-25817757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr13:37381718-37382055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 90
               

               
Conread position:
               
46-380
               

               
Cow position:
               
chr13:12449071-12448745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 84
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr13:6974078-6974414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
182, 100
               

               
Conread position:
               
46-427
               

               
Cow position:
               
chr13:19022188-19022575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 223
               

               
Conread position:
               
47-200
               

               
Cow position:
               
chr13:15757038-15757191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-247
               

               
Cow position:
               
chr13:21135987-21135782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
47-293
               

               
Cow position:
               
chr13:15144448-15144205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
92, 145
               

               
Conread position:
               
47-336
               

               
Cow position:
               
chr13:15529118-15528828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 222
               

               
Conread position:
               
47-374
               

               
Cow position:
               
chr13:56686352-56686666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr13:14063603-14063284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 160
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr13:52586119-52585777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
96, 223
               

               
Conread position:
               
48-224
               

               
Cow position:
               
chr13:18197689-18197508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
48-254
               

               
Cow position:
               
chr13:39826476-39826678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
48-259
               

               
Cow position:
               
chr13:25380882-25381092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
186, 94
               

               
Conread position:
               
48-279
               

               
Cow position:
               
chr13:1363613-1363841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
181, 89
               

               
Conread position:
               
48-293
               

               
Cow position:
               
chr13:23512289-23512534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
184, 65
               

               
Conread position:
               
48-295
               

               
Cow position:
               
chr13:25495924-25496169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
185, 218
               

               
Conread position:
               
48-312
               

               
Cow position:
               
chr13:607339-607085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
181, 86
               

               
Conread position:
               
48-313
               

               
Cow position:
               
chr13:11643858-11644110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 164
               

               
Conread position:
               
48-313
               

               
Cow position:
               
chr13:19188220-19188481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
181, 109
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr13:9846543-9846264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 214
               

               
Conread position:
               
48-333
               

               
Cow position:
               
chr13:8652523-8652240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr13:547412-547689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
176, 41
               

               
Conread position:
               
48-340
               

               
Cow position:
               
chr13:37593028-37592734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
7, 226
               

               
Conread position:
               
48-340
               

               
Cow position:
               
chr13:59170572-59170861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-342
               

               
Cow position:
               
chr13:9643968-9643676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
180, 140
               

               
Conread position:
               
48-346
               

               
Cow position:
               
chr13:53195362-53195082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
181, 82
               

               
Conread position:
               
48-346
               

               
Cow position:
               
chr13:60340725-60341024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr13:36771502-36771205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
48-358
               

               
Cow position:
               
chr13:12202281-12202587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 210
               

               
Conread position:
               
48-364
               

               
Cow position:
               
chr13:20650068-20649754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
9, 225
               

               
Conread position:
               
48-365
               

               
Cow position:
               
chr13:52197561-52197870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr13:42200538-42200856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 110
               

               
Conread position:
               
48-374
               

               
Cow position:
               
chr13:48037542-48037859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr13:2883980-2884293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
170, 91
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr13:1231559-1231892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 206
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr13:12408370-12408040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr13:12670532-12670201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 143
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr13:15872360-15872693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr13:19138359-19138681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr13:25926709-25927036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 129
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr13:32283047-32283371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr13:46515980-46516309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
117, 103
               

               
Conread position:
               
48-392
               

               
Cow position:
               
chr13:45023290-45022951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
49-211
               

               
Cow position:
               
chr13:47022285-47022441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chr13:52929631-52929845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
179, 91
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr13:38284058-38283744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 93
               

               
Conread position:
               
49-387
               

               
Cow position:
               
chr13:40943163-40943497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
49-407
               

               
Cow position:
               
chr13:7076177-7076533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
50-275
               

               
Cow position:
               
chr13:20360200-20360416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
50-375
               

               
Cow position:
               
chr13:42113940-42114261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
98, 107
               

               
Conread position:
               
50-377
               

               
Cow position:
               
chr13:15958535-15958863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 224
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr13:890248-889935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr13:8201562-8201236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
50-396
               

               
Cow position:
               
chr13:37069266-37069610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 123
               

               
Conread position:
               
51-220
               

               
Cow position:
               
chr13:52477725-52477555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
51-379
               

               
Cow position:
               
chr13:25435202-25434885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 208
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr13:36353034-36352727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
53-365
               

               
Cow position:
               
chr13:57002650-57002962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
53-379
               

               
Cow position:
               
chr13:51528519-51528202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
56-321
               

               
Cow position:
               
chr13:12619188-12618924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 208
               

               
Conread position:
               
57-237
               

               
Cow position:
               
chr13:32826529-32826348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
57-378
               

               
Cow position:
               
chr13:24376421-24376733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 139
               

               
Conread position:
               
59-373
               

               
Cow position:
               
chr13:17745173-17745476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
60-388
               

               
Cow position:
               
chr13:35526270-35525961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
293, 80
               

               
Conread position:
               
67-379
               

               
Cow position:
               
chr13:30693652-30693945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 72
               

               
Conread position:
               
72-292
               

               
Cow position:
               
chr13:28652746-28652959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr13:20440633-20440359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
78-382
               

               
Cow position:
               
chr13:20880981-20880679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 189
               

               
Conread position:
               
81-379
               

               
Cow position:
               
chr13:13265759-13266045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
83-379
               

               
Cow position:
               
chr13:52922049-52922332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 70
               

               
Conread position:
               
98-383
               

               
Cow position:
               
chr13:12682577-12682293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
100-292
               

               
Cow position:
               
chr13:26365853-26366044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
103-351
               

               
Cow position:
               
chr13:52199060-52199304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
233-426
               

               
Cow position:
               
chr13:53308598-53308787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
245-424
               

               
Cow position:
               
chr13:11202364-11202547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 15
               
Show alignments to all cow chromosomes.