Cow genome map

Conread name: Utr2-C0001805_L19

Conread position: 2-227
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 9

Conread position: 2-366
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 252

Conread position: 2-379
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 288, 106

Conread position: 2-379
Cow position:
Alignm length: 382
Alignm identity: 257
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 40, 96

Conread position: 2-379
Cow position:
Alignm length: 384
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 173

Conread position: 3-376
Cow position:
Alignm length: 382
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 188

Conread position: 8-166
Cow position:
Alignm length: 159
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-240
Cow position:
Alignm length: 233
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 9-221
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 9-313
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 9-342
Cow position:
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 13

Conread position: 9-346
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 9-373
Cow position:
Alignm length: 368
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 64

Conread position: 9-379
Cow position:
Alignm length: 378
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 81

Conread position: 25-379
Cow position:
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 82

Conread position: 28-379
Cow position:
Alignm length: 352
Alignm identity: 245
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 0

Conread position: 30-373
Cow position:
Alignm length: 348
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 261, 121

Conread position: 30-373
Cow position:
Alignm length: 350
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 115

Conread position: 32-333
Cow position:
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 32-378
Cow position:
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 166

Conread position: 32-378
Cow position:
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 108

Conread position: 33-232
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 33-321
Cow position:
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 83

Conread position: 33-336
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 182, 229

Conread position: 33-336
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 239

Conread position: 33-358
Cow position:
Alignm length: 328
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 116, 92

Conread position: 33-378
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 70

Conread position: 33-378
Cow position:
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 37

Conread position: 33-379
Cow position:
Alignm length: 352
Alignm identity: 246
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 44, 37

Conread position: 33-379
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 136

Conread position: 33-379
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 74

Conread position: 33-392
Cow position:
Alignm length: 372
Alignm identity: 256
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 57, 150

Conread position: 33-426
Cow position:
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 98

Conread position: 34-356
Cow position:
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 237

Conread position: 34-375
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 52

Conread position: 34-388
Cow position:
Alignm length: 363
Alignm identity: 238
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 145

Conread position: 34-409
Cow position:
Alignm length: 379
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 34

Conread position: 35-348
Cow position:
Alignm length: 317
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 239

Conread position: 39-237
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 44

Conread position: 39-336
Cow position:
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 40-375
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 31

Conread position: 41-178
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 41-222
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 94

Conread position: 41-260
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 41-263
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 41-266
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 193, 94

Conread position: 41-266
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 0

Conread position: 41-286
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 148

Conread position: 41-312
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 135

Conread position: 41-335
Cow position:
Alignm length: 306
Alignm identity: 213
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 96, 67

Conread position: 41-336
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 106, 0

Conread position: 41-337
Cow position:
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 226

Conread position: 41-353
Cow position:
Alignm length: 318
Alignm identity: 230
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 101, 20

Conread position: 41-356
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 227

Conread position: 41-373
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 193, 113

Conread position: 41-375
Cow position:
Alignm length: 336
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 39

Conread position: 41-376
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 99

Conread position: 41-378
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 85, 74

Conread position: 41-379
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 189

Conread position: 41-379
Cow position:
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 226

Conread position: 41-379
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 69

Conread position: 41-379
Cow position:
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 164

Conread position: 41-379
Cow position:
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 19

Conread position: 41-380
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 96, 233

Conread position: 41-388
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 270, 90

Conread position: 41-405
Cow position:
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 96

Conread position: 44-375
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 102

Conread position: 45-275
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 69

Conread position: 45-277
Cow position:
Alignm length: 237
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 89, 111

Conread position: 45-313
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 184, 225

Conread position: 45-313
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 166

Conread position: 45-364
Cow position:
Alignm length: 323
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 103, 115

Conread position: 45-372
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 194

Conread position: 45-373
Cow position:
Alignm length: 334
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 95, 218

Conread position: 45-375
Cow position:
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 72, 65

Conread position: 45-375
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 65

Conread position: 45-375
Cow position:
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 91

Conread position: 45-379
Cow position:
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 85

Conread position: 45-379
Cow position:
Alignm length: 348
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 70

Conread position: 45-379
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 199, 68

Conread position: 45-414
Cow position:
Alignm length: 383
Alignm identity: 252
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 200

Conread position: 46-340
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 90, 0

Conread position: 46-352
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 110, 62

Conread position: 46-359
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 80

Conread position: 46-372
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 95

Conread position: 46-375
Cow position:
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 22

Conread position: 46-379
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 22

Conread position: 46-379
Cow position:
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 128

Conread position: 46-379
Cow position:
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 81

Conread position: 46-388
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 104, 118

Conread position: 47-193
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 98, 135

Conread position: 47-263
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 47-374
Cow position:
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 68

Conread position: 48-222
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 140

Conread position: 48-292
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 59

Conread position: 48-346
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 180, 23

Conread position: 48-346
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 149

Conread position: 48-347
Cow position:
Alignm length: 310
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 148

Conread position: 48-356
Cow position:
Alignm length: 322
Alignm identity: 211
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 83, 181

Conread position: 48-356
Cow position:
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 217

Conread position: 48-356
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 221

Conread position: 48-357
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 126

Conread position: 48-372
Cow position:
Alignm length: 333
Alignm identity: 220
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 94

Conread position: 48-373
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 100, 94

Conread position: 48-373
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 181, 49

Conread position: 48-374
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 97, 145

Conread position: 48-375
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 41

Conread position: 48-375
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 42, 177

Conread position: 48-375
Cow position:
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 155

Conread position: 48-376
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 300, 25

Conread position: 48-379
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 48-379
Cow position:
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 28

Conread position: 48-379
Cow position:
Alignm length: 339
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 53

Conread position: 48-379
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 46, 172

Conread position: 48-421
Cow position:
Alignm length: 395
Alignm identity: 257
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 227

Conread position: 48-426
Cow position:
Alignm length: 399
Alignm identity: 267
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 65

Conread position: 48-452
Cow position:
Alignm length: 416
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 162

Conread position: 49-320
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 109

Conread position: 49-351
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 24

Conread position: 49-367
Cow position:
Alignm length: 320
Alignm identity: 222
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 309, 90

Conread position: 49-379
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 87

Conread position: 49-379
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 163

Conread position: 50-312
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 65

Conread position: 50-375
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 45, 71

Conread position: 51-378
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 150, 88

Conread position: 55-259
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 107

Conread position: 55-379
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 103, 91

Conread position: 57-207
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 126

Conread position: 65-313
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 201

Conread position: 67-426
Cow position:
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 200

Conread position: 72-379
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 162, 67

Conread position: 75-379
Cow position:
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 87

Conread position: 77-373
Cow position:
Alignm length: 299
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 79

Conread position: 77-471
Cow position:
Alignm length: 417
Alignm identity: 277
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 112

Conread position: 98-375
Cow position:
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 52

Conread position: 267-426
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 99

Show alignments to all cow chromosomes.