Cow genome map

Conread name: Utr2-C0001805_L19

Conread position: 2-248
Cow position:
Alignm length: 251
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 133

Conread position: 6-222
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 9-279
Cow position:
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 140, 81

Conread position: 9-320
Cow position:
Alignm length: 313
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 219, 142

Conread position: 9-352
Cow position:
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 137

Conread position: 9-379
Cow position:
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 178

Conread position: 9-379
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 59

Conread position: 9-384
Cow position:
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 88

Conread position: 9-392
Cow position:
Alignm length: 387
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 141

Conread position: 10-469
Cow position:
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 258

Conread position: 13-280
Cow position:
Alignm length: 275
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 10

Conread position: 13-361
Cow position:
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 6

Conread position: 27-386
Cow position:
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 95

Conread position: 30-313
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 12, 87

Conread position: 30-367
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 12, 87

Conread position: 32-257
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 118, 25

Conread position: 32-378
Cow position:
Alignm length: 350
Alignm identity: 243
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 149, 83

Conread position: 32-379
Cow position:
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 32-379
Cow position:
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 42

Conread position: 33-197
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 33-222
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 85, 80

Conread position: 33-312
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 113

Conread position: 33-316
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 195, 63

Conread position: 33-356
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 43, 36

Conread position: 33-358
Cow position:
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 226

Conread position: 33-370
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 195, 41

Conread position: 33-373
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 320, 107

Conread position: 33-375
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 200, 163

Conread position: 33-379
Cow position:
Alignm length: 349
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 163

Conread position: 34-311
Cow position:
Alignm length: 278
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 34-318
Cow position:
Alignm length: 296
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 242

Conread position: 34-379
Cow position:
Alignm length: 347
Alignm identity: 242
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 120, 191

Conread position: 34-379
Cow position:
Alignm length: 351
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 182

Conread position: 34-379
Cow position:
Alignm length: 350
Alignm identity: 243
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 117, 63

Conread position: 34-379
Cow position:
Alignm length: 348
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 120

Conread position: 35-232
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 109

Conread position: 35-337
Cow position:
Alignm length: 304
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 30

Conread position: 35-379
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 31

Conread position: 35-379
Cow position:
Alignm length: 345
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 39-379
Cow position:
Alignm length: 347
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 96, 132

Conread position: 39-383
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 74

Conread position: 41-173
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 41-187
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 112

Conread position: 41-194
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 41-201
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 41-214
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 36

Conread position: 41-253
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 41-268
Cow position:
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 48

Conread position: 41-283
Cow position:
Alignm length: 250
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 41-319
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 35

Conread position: 41-332
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 105, 206

Conread position: 41-334
Cow position:
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 69

Conread position: 41-346
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 187, 99

Conread position: 41-356
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 71

Conread position: 41-371
Cow position:
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 114

Conread position: 41-372
Cow position:
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 225

Conread position: 41-374
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 223

Conread position: 41-375
Cow position:
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 161

Conread position: 41-378
Cow position:
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 42

Conread position: 41-379
Cow position:
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 229

Conread position: 41-379
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 99

Conread position: 41-379
Cow position:
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 18

Conread position: 41-379
Cow position:
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 142

Conread position: 41-379
Cow position:
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 81

Conread position: 41-379
Cow position:
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 183

Conread position: 41-379
Cow position:
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 146

Conread position: 41-379
Cow position:
Alignm length: 354
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 226

Conread position: 41-379
Cow position:
Alignm length: 353
Alignm identity: 247
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 31, 41

Conread position: 41-380
Cow position:
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 14

Conread position: 41-383
Cow position:
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 38

Conread position: 41-387
Cow position:
Alignm length: 356
Alignm identity: 244
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 62, 123

Conread position: 41-388
Cow position:
Alignm length: 350
Alignm identity: 242
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 95, 113

Conread position: 41-426
Cow position:
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 157

Conread position: 43-379
Cow position:
Alignm length: 342
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 212

Conread position: 44-379
Cow position:
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 32

Conread position: 45-214
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 45-217
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 45-374
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 10

Conread position: 45-375
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 73, 95

Conread position: 45-379
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 123

Conread position: 45-384
Cow position:
Alignm length: 349
Alignm identity: 235
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 85, 69

Conread position: 45-390
Cow position:
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 108

Conread position: 46-182
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 46-243
Cow position:
Alignm length: 198
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 46-253
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 46-314
Cow position:
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 46-375
Cow position:
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 81

Conread position: 46-379
Cow position:
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 51

Conread position: 46-379
Cow position:
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 221

Conread position: 46-379
Cow position:
Alignm length: 343
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 46-379
Cow position:
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 123

Conread position: 46-380
Cow position:
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 180

Conread position: 47-214
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 47-355
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 181, 110

Conread position: 47-375
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 115, 0

Conread position: 47-379
Cow position:
Alignm length: 336
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 173, 103

Conread position: 47-379
Cow position:
Alignm length: 333
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 48-253
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 48-253
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 136

Conread position: 48-332
Cow position:
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 7

Conread position: 48-343
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 180, 89

Conread position: 48-373
Cow position:
Alignm length: 330
Alignm identity: 216
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 68

Conread position: 48-379
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 0

Conread position: 48-379
Cow position:
Alignm length: 338
Alignm identity: 231
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 75, 65

Conread position: 48-379
Cow position:
Alignm length: 335
Alignm identity: 228
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 178, 26

Conread position: 48-379
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 48

Conread position: 48-379
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 62, 71

Conread position: 48-379
Cow position:
Alignm length: 333
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 36

Conread position: 48-383
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 226

Conread position: 48-426
Cow position:
Alignm length: 393
Alignm identity: 247
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 23

Conread position: 49-356
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 221

Conread position: 49-379
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 63

Conread position: 50-283
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 60

Conread position: 50-375
Cow position:
Alignm length: 333
Alignm identity: 228
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 89, 110

Conread position: 50-426
Cow position:
Alignm length: 386
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 90

Conread position: 51-203
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 37

Conread position: 51-379
Cow position:
Alignm length: 333
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 178, 81

Conread position: 53-271
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 175, 0

Conread position: 54-379
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 54-379
Cow position:
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 154

Conread position: 56-379
Cow position:
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 183

Conread position: 59-234
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 88, 81

Conread position: 70-241
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 69, 91

Show alignments to all cow chromosomes.