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Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
2-346
               

               
Cow position:
               
chr21:10007461-10007802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr21:39664220-39664572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr21:12366548-12366192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr21:47760946-47760582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
8-302
               

               
Cow position:
               
chr21:44214296-44214001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
146, 71
               

               
Conread position:
               
8-377
               

               
Cow position:
               
chr21:18844843-18845208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 5
               

               
Conread position:
               
9-258
               

               
Cow position:
               
chr21:40432613-40432368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
9-367
               

               
Cow position:
               
chr21:30592140-30592485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
9-373
               

               
Cow position:
               
chr21:46264339-46263987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 95
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr21:6713354-6713733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr21:27229626-27229990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr21:44565553-44565897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr21:643493-643133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 118
               

               
Conread position:
               
10-375
               

               
Cow position:
               
chr21:23672913-23672553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
246, 76
               

               
Conread position:
               
10-382
               

               
Cow position:
               
chr21:42135448-42135822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 259
               

               
Conread position:
               
13-374
               

               
Cow position:
               
chr21:641751-641394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 6
               

               
Conread position:
               
13-379
               

               
Cow position:
               
chr21:4904803-4905162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
14-375
               

               
Cow position:
               
chr21:45151465-45151814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
17-378
               

               
Cow position:
               
chr21:25764796-25764441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
19-383
               

               
Cow position:
               
chr21:29214001-29214355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 144
               

               
Conread position:
               
28-196
               

               
Cow position:
               
chr21:47160368-47160199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
118, 142
               

               
Conread position:
               
30-266
               

               
Cow position:
               
chr21:6017775-6017528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
30-277
               

               
Cow position:
               
chr21:9697930-9698185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr21:44962947-44962647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 174
               

               
Conread position:
               
33-181
               

               
Cow position:
               
chr21:19240728-19240880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
33-186
               

               
Cow position:
               
chr21:41046951-41046796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
33-235
               

               
Cow position:
               
chr21:868779-868982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 136
               

               
Conread position:
               
33-266
               

               
Cow position:
               
chr21:9940043-9940282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
33-321
               

               
Cow position:
               
chr21:12723296-12723020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
33-368
               

               
Cow position:
               
chr21:28191177-28190844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr21:34390830-34391159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
33-374
               

               
Cow position:
               
chr21:34654218-34653894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 71
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr21:5898257-5898590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
324, 58
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr21:36795748-36795411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
123, 235
               

               
Conread position:
               
33-377
               

               
Cow position:
               
chr21:32559220-32559547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 94
               

               
Conread position:
               
33-378
               

               
Cow position:
               
chr21:31253678-31253341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 53
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr21:29485123-29484789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr21:30848796-30849134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 223
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr21:45355978-45355641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr21:31662612-31662260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
33-395
               

               
Cow position:
               
chr21:6051648-6051295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 103
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr21:22210102-22210332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
34-277
               

               
Cow position:
               
chr21:30835507-30835262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr21:1591698-1591357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 229
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr21:3585224-3585551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr21:41974234-41974579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr21:26245058-26244730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
309, 120
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr21:38900917-38900569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 21
               

               
Conread position:
               
35-214
               

               
Cow position:
               
chr21:29014415-29014596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
39-375
               

               
Cow position:
               
chr21:15545222-15545554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
39-378
               

               
Cow position:
               
chr21:33997088-33997416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
112, 143
               

               
Conread position:
               
41-142
               

               
Cow position:
               
chr21:39393885-39393784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-167
               

               
Cow position:
               
chr21:36682462-36682332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
41-185
               

               
Cow position:
               
chr21:20183208-20183064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr21:47363597-47363782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr21:8426583-8426379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
41-251
               

               
Cow position:
               
chr21:16570038-16569828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
126, 95
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr21:45262673-45262886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 142
               

               
Conread position:
               
41-271
               

               
Cow position:
               
chr21:4280537-4280766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
41-308
               

               
Cow position:
               
chr21:30222482-30222218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 120
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr21:47177-46911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
99, 222
               

               
Conread position:
               
41-325
               

               
Cow position:
               
chr21:48234029-48234299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
41-342
               

               
Cow position:
               
chr21:18800397-18800686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
41-344
               

               
Cow position:
               
chr21:41590428-41590716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
41-350
               

               
Cow position:
               
chr21:27624835-27624547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
41-369
               

               
Cow position:
               
chr21:9990647-9990329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr21:22856355-22856029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr21:24598795-24598470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr21:28924246-28923937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
187, 105
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr21:22861138-22860808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr21:37299599-37299271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 143
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr21:42841460-42841785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
115, 170
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:3818346-3818021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
160, 106
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:7564170-7564517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
89, 226
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:7673257-7672938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:11644829-11645164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 214
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:12801610-12801939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 164
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:23822292-23821973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 89
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:27569036-27569353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:29069189-29069524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 227
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:31691619-31691282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:33350878-33350547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 86
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:33982673-33983005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:42384645-42384310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 98
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr21:42540085-42540415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 140
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr21:4399940-4399599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr21:38121238-38120868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 147
               

               
Conread position:
               
41-472
               

               
Cow position:
               
chr21:23321941-23322365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 153
               

               
Conread position:
               
43-378
               

               
Cow position:
               
chr21:24858450-24858117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 148
               

               
Conread position:
               
44-187
               

               
Cow position:
               
chr21:674819-674675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
44-304
               

               
Cow position:
               
chr21:42097209-42096945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
44-367
               

               
Cow position:
               
chr21:46144093-46143760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
100, 186
               

               
Conread position:
               
45-214
               

               
Cow position:
               
chr21:42209496-42209667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
45-227
               

               
Cow position:
               
chr21:19059960-19060136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr21:17890435-17890249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 88
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr21:17009114-17008893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
111, 172
               

               
Conread position:
               
45-287
               

               
Cow position:
               
chr21:37789866-37790110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 201
               

               
Conread position:
               
45-300
               

               
Cow position:
               
chr21:2657942-2657704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
112, 95
               

               
Conread position:
               
45-304
               

               
Cow position:
               
chr21:18155433-18155693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 219
               

               
Conread position:
               
45-343
               

               
Cow position:
               
chr21:13840459-13840164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
45-345
               

               
Cow position:
               
chr21:32455037-32454741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
45-359
               

               
Cow position:
               
chr21:41198266-41198586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
45-366
               

               
Cow position:
               
chr21:13488660-13488337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 220
               

               
Conread position:
               
45-374
               

               
Cow position:
               
chr21:13048060-13048387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
98, 175
               

               
Conread position:
               
45-375
               

               
Cow position:
               
chr21:40899472-40899145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr21:28477762-28477431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr21:33729563-33729238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
184, 151
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr21:36297626-36297284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 223
               

               
Conread position:
               
46-173
               

               
Cow position:
               
chr21:12104498-12104369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
46-203
               

               
Cow position:
               
chr21:28030420-28030263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
46-214
               

               
Cow position:
               
chr21:45835269-45835438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
46-223
               

               
Cow position:
               
chr21:22014322-22014142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 126
               

               
Conread position:
               
46-253
               

               
Cow position:
               
chr21:36910063-36909859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
188, 85
               

               
Conread position:
               
46-281
               

               
Cow position:
               
chr21:22465323-22465093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
138, 72
               

               
Conread position:
               
46-322
               

               
Cow position:
               
chr21:20153088-20152810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
94, 228
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr21:11360167-11359899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
46-329
               

               
Cow position:
               
chr21:35354663-35354393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
46-359
               

               
Cow position:
               
chr21:32339608-32339912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
46-366
               

               
Cow position:
               
chr21:15911532-15911218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
46-367
               

               
Cow position:
               
chr21:7581773-7582092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 90
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr21:47464987-47465309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
46-373
               

               
Cow position:
               
chr21:14452366-14452041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
282, 119
               

               
Conread position:
               
46-374
               

               
Cow position:
               
chr21:16187675-16187989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 135
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr21:5427072-5426755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
184, 91
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr21:39403393-39403729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 218
               

               
Conread position:
               
46-376
               

               
Cow position:
               
chr21:45473626-45473950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
166, 97
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr21:724753-725087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr21:5392403-5392737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 198
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr21:36763193-36762858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 175
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr21:37344969-37345300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
188, 67
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr21:44825754-44826071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 130
               

               
Conread position:
               
46-387
               

               
Cow position:
               
chr21:395999-395673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
46-387
               

               
Cow position:
               
chr21:28442864-28442541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 85
               

               
Conread position:
               
47-168
               

               
Cow position:
               
chr21:19360045-19360167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
47-243
               

               
Cow position:
               
chr21:297885-297687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
102, 113
               

               
Conread position:
               
47-288
               

               
Cow position:
               
chr21:10673252-10673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
47-320
               

               
Cow position:
               
chr21:20418551-20418825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 221
               

               
Conread position:
               
47-374
               

               
Cow position:
               
chr21:13365473-13365151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr21:29002022-29002357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
48-222
               

               
Cow position:
               
chr21:33580549-33580377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
48-227
               

               
Cow position:
               
chr21:28919393-28919573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
48-253
               

               
Cow position:
               
chr21:46551973-46552181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
48-269
               

               
Cow position:
               
chr21:11198018-11198240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 99
               

               
Conread position:
               
48-282
               

               
Cow position:
               
chr21:17559793-17560033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
48-300
               

               
Cow position:
               
chr21:25628780-25629027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
176, 197
               

               
Conread position:
               
48-321
               

               
Cow position:
               
chr21:17875063-17875332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
48-323
               

               
Cow position:
               
chr21:12461837-12462109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
97, 224
               

               
Conread position:
               
48-326
               

               
Cow position:
               
chr21:9301353-9301067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 234
               

               
Conread position:
               
48-342
               

               
Cow position:
               
chr21:11027225-11027514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
185, 103
               

               
Conread position:
               
48-352
               

               
Cow position:
               
chr21:10001205-10000913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-364
               

               
Cow position:
               
chr21:17184047-17183741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
133, 65
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr21:938149-937858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr21:10264163-10263852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr21:10601245-10601559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 143
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr21:41597941-41597624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
186, 90
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:4998365-4998680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
199, 63
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:6834179-6833857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:13034908-13035244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 106
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:19196034-19196363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 103
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:19766984-19766659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
165, 106
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:20160806-20160489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:23535839-23535518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
180, 65
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:27341465-27341792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr21:30231564-30231898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 94
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr21:23587012-23586676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 214
               

               
Conread position:
               
48-395
               

               
Cow position:
               
chr21:33849-33510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
48-413
               

               
Cow position:
               
chr21:7710292-7709938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
48-422
               

               
Cow position:
               
chr21:15584289-15584640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
92, 177
               

               
Conread position:
               
49-250
               

               
Cow position:
               
chr21:8349457-8349256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
49-314
               

               
Cow position:
               
chr21:36789924-36789664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
103, 91
               

               
Conread position:
               
50-346
               

               
Cow position:
               
chr21:18064786-18065085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr21:15976761-15976464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 92
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr21:24888127-24887819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr21:5970710-5971030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr21:16696501-16696175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr21:24296640-24296963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
50-388
               

               
Cow position:
               
chr21:44515392-44515070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr21:47729894-47730207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 199
               

               
Conread position:
               
51-379
               

               
Cow position:
               
chr21:24131196-24130886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
51-408
               

               
Cow position:
               
chr21:4281748-4282090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr21:47719173-47719376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 135
               

               
Conread position:
               
52-320
               

               
Cow position:
               
chr21:17856670-17856408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 165
               

               
Conread position:
               
54-379
               

               
Cow position:
               
chr21:2367456-2367145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 81
               

               
Conread position:
               
56-380
               

               
Cow position:
               
chr21:11739997-11740328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 159
               

               
Conread position:
               
58-371
               

               
Cow position:
               
chr21:13489766-13489455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
175, 213
               

               
Conread position:
               
60-379
               

               
Cow position:
               
chr21:20262217-20262529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
62-375
               

               
Cow position:
               
chr21:426923-426599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
90, 127
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr21:37480070-37479761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 6
               

               
Conread position:
               
67-322
               

               
Cow position:
               
chr21:44733062-44733299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
68-379
               

               
Cow position:
               
chr21:2679667-2679357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
70-280
               

               
Cow position:
               
chr21:2904370-2904572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
70-378
               

               
Cow position:
               
chr21:4795334-4795028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
83-331
               

               
Cow position:
               
chr21:18041752-18041989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 183
               

               
Conread position:
               
98-378
               

               
Cow position:
               
chr21:7132398-7132656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-379
               

               
Cow position:
               
chr21:21077405-21077134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
99-392
               

               
Cow position:
               
chr21:12960819-12961107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 41
               
Show alignments to all cow chromosomes.