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Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
2-266
               

               
Cow position:
               
chr22:9668687-9668410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr22:31196389-31196758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
22, 192
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr22:41971047-41971410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 16
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr22:38930397-38930776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr22:15950281-15950635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
8-188
               

               
Cow position:
               
chr22:12686583-12686754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
8-379
               

               
Cow position:
               
chr22:34750776-34750415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 47
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr22:34104570-34104786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr22:27740992-27740723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
9-369
               

               
Cow position:
               
chr22:3965288-3964933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 214
               

               
Conread position:
               
9-373
               

               
Cow position:
               
chr22:10532602-10532240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 133
               

               
Conread position:
               
9-373
               

               
Cow position:
               
chr22:44717823-44717455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 245
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr22:4060845-4061197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
9-378
               

               
Cow position:
               
chr22:45846243-45845866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
259, 10
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr22:10339017-10339374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
10-271
               

               
Cow position:
               
chr22:40789666-40789407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr22:17152777-17152417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 5
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr22:28071659-28071292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 45
               

               
Conread position:
               
13-323
               

               
Cow position:
               
chr22:8429984-8429677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
13-379
               

               
Cow position:
               
chr22:14091126-14091493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
14-375
               

               
Cow position:
               
chr22:38313381-38313722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
14-379
               

               
Cow position:
               
chr22:16812068-16812425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
17-334
               

               
Cow position:
               
chr22:19827769-19828089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 155
               

               
Conread position:
               
17-375
               

               
Cow position:
               
chr22:10936757-10937091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 72
               

               
Conread position:
               
23-339
               

               
Cow position:
               
chr22:15068519-15068204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 155
               

               
Conread position:
               
23-372
               

               
Cow position:
               
chr22:11813634-11813971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
27-352
               

               
Cow position:
               
chr22:4108646-4108973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
102, 164
               

               
Conread position:
               
30-384
               

               
Cow position:
               
chr22:42605717-42605369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
32-223
               

               
Cow position:
               
chr22:37947804-37947611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 128
               

               
Conread position:
               
32-232
               

               
Cow position:
               
chr22:4011263-4011063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
32-266
               

               
Cow position:
               
chr22:42635353-42635586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
32-375
               

               
Cow position:
               
chr22:1591103-1590762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 231
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr22:4645852-4645515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr22:8324318-8323986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr22:28640071-28640414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 106
               

               
Conread position:
               
32-384
               

               
Cow position:
               
chr22:28371020-28370679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
33-196
               

               
Cow position:
               
chr22:10553607-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
119, 109
               

               
Conread position:
               
33-342
               

               
Cow position:
               
chr22:47555926-47555620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
239, 64
               

               
Conread position:
               
33-372
               

               
Cow position:
               
chr22:10295113-10294795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr22:37201927-37201601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr22:14178749-14179093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr22:26184083-26184422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr22:26339832-26339497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 114
               

               
Conread position:
               
34-375
               

               
Cow position:
               
chr22:8481721-8481389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 68
               

               
Conread position:
               
34-375
               

               
Cow position:
               
chr22:21012461-21012132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
319, 21
               

               
Conread position:
               
34-375
               

               
Cow position:
               
chr22:40720218-40720545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr22:22160803-22160460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 233
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr22:22613183-22612849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 143
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr22:6215479-6215829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 196
               

               
Conread position:
               
35-385
               

               
Cow position:
               
chr22:28665360-28665000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 103
               

               
Conread position:
               
35-424
               

               
Cow position:
               
chr22:3316172-3315791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr22:4651249-4650919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
39-288
               

               
Cow position:
               
chr22:9283526-9283772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
105, 201
               

               
Conread position:
               
39-350
               

               
Cow position:
               
chr22:36633295-36633000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
40-375
               

               
Cow position:
               
chr22:864444-864776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
41-199
               

               
Cow position:
               
chr22:1659234-1659074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 145
               

               
Conread position:
               
41-210
               

               
Cow position:
               
chr22:1983918-1983753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
41-215
               

               
Cow position:
               
chr22:10669403-10669578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 141
               

               
Conread position:
               
41-229
               

               
Cow position:
               
chr22:38320616-38320796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
41-237
               

               
Cow position:
               
chr22:15731264-15731074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
41-251
               

               
Cow position:
               
chr22:16094833-16095041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
41-253
               

               
Cow position:
               
chr22:34735934-34735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 161
               

               
Conread position:
               
41-254
               

               
Cow position:
               
chr22:25387397-25387184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
103, 175
               

               
Conread position:
               
41-257
               

               
Cow position:
               
chr22:4315699-4315480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
41-265
               

               
Cow position:
               
chr22:31510308-31510522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
41-266
               

               
Cow position:
               
chr22:30818283-30818056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 167
               

               
Conread position:
               
41-286
               

               
Cow position:
               
chr22:14638407-14638652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 203
               

               
Conread position:
               
41-318
               

               
Cow position:
               
chr22:12800741-12800463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
41-322
               

               
Cow position:
               
chr22:30998956-30998693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
41-342
               

               
Cow position:
               
chr22:5616372-5616075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 96
               

               
Conread position:
               
41-344
               

               
Cow position:
               
chr22:43119659-43119955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
41-346
               

               
Cow position:
               
chr22:13300481-13300181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 106
               

               
Conread position:
               
41-355
               

               
Cow position:
               
chr22:10315146-10314841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
41-357
               

               
Cow position:
               
chr22:14690901-14691215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 101
               

               
Conread position:
               
41-367
               

               
Cow position:
               
chr22:6709721-6710025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
41-367
               

               
Cow position:
               
chr22:17949902-17950207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 101
               

               
Conread position:
               
41-370
               

               
Cow position:
               
chr22:590409-590090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 141
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr22:30699251-30698926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 178
               

               
Conread position:
               
41-372
               

               
Cow position:
               
chr22:18838326-18838000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 189
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr22:17294866-17295184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr22:2216879-2216566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
317, 39
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr22:7838660-7838347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
312, 40
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr22:7967772-7967440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr22:16273710-16273373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:845973-845641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 161
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:4119492-4119830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 227
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:5337528-5337860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:10162037-10161703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 139
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:11613494-11613166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 81
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:16044346-16044691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 99
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:18259289-18258966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 35
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:19775362-19775687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
108, 136
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:25742879-25743215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 140
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:26134154-26134497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 231
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr22:26141345-26141012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
41-382
               

               
Cow position:
               
chr22:17852566-17852887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
41-388
               

               
Cow position:
               
chr22:13957574-13957921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 186
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr22:12803315-12803694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 190
               

               
Conread position:
               
41-471
               

               
Cow position:
               
chr22:6327699-6328110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 134
               

               
Conread position:
               
42-186
               

               
Cow position:
               
chr22:12157775-12157918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
42-375
               

               
Cow position:
               
chr22:23115239-23115563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
42-384
               

               
Cow position:
               
chr22:912167-911835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
45-227
               

               
Cow position:
               
chr22:2123358-2123179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
45-248
               

               
Cow position:
               
chr22:17193456-17193250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
45-249
               

               
Cow position:
               
chr22:27619800-27619592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 200
               

               
Conread position:
               
45-252
               

               
Cow position:
               
chr22:21325667-21325875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
45-276
               

               
Cow position:
               
chr22:43131492-43131713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
45-312
               

               
Cow position:
               
chr22:12313490-12313225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
45-321
               

               
Cow position:
               
chr22:23689138-23689410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
184, 98
               

               
Conread position:
               
45-350
               

               
Cow position:
               
chr22:27825906-27825604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 95
               

               
Conread position:
               
45-373
               

               
Cow position:
               
chr22:18926422-18926095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 133
               

               
Conread position:
               
45-375
               

               
Cow position:
               
chr22:1279319-1279644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr22:46626314-46626630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr22:2470174-2470509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 167
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr22:4988494-4988821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 133
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr22:40374675-40374344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr22:15760428-15760089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
46-191
               

               
Cow position:
               
chr22:9171473-9171325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
46-196
               

               
Cow position:
               
chr22:14214301-14214448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
46-232
               

               
Cow position:
               
chr22:43237343-43237528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
46-250
               

               
Cow position:
               
chr22:30577580-30577384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 137
               

               
Conread position:
               
46-316
               

               
Cow position:
               
chr22:1849139-1848866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
92, 229
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr22:5675116-5675377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr22:27431638-27431938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 53
               

               
Conread position:
               
46-373
               

               
Cow position:
               
chr22:4017538-4017219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 30
               

               
Conread position:
               
46-374
               

               
Cow position:
               
chr22:10631451-10631118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 229
               

               
Conread position:
               
46-374
               

               
Cow position:
               
chr22:30049501-30049830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 222
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr22:4357155-4356841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 30
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr22:15567951-15568277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr22:34616371-34616051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 100
               

               
Conread position:
               
46-376
               

               
Cow position:
               
chr22:12968004-12968328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 221
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr22:14882051-14882372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr22:35753244-35753567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:2623457-2623776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:3250929-3251251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:9977874-9977558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:15039117-15039448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:15490719-15490397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:20626902-20626579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:22155670-22155339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
102, 170
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:23176376-23176713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
104, 96
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:30483980-30483650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 81
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:31646557-31646232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 131
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:34726733-34726412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr22:44741141-44740844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
46-380
               

               
Cow position:
               
chr22:8412593-8412261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
46-383
               

               
Cow position:
               
chr22:3317186-3316863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 130
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr22:43788064-43788397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
46-391
               

               
Cow position:
               
chr22:13286513-13286169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr22:1871162-1870990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 134
               

               
Conread position:
               
47-316
               

               
Cow position:
               
chr22:4373100-4372843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
47-320
               

               
Cow position:
               
chr22:27274636-27274895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
47-357
               

               
Cow position:
               
chr22:10632978-10632675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
296, 50
               

               
Conread position:
               
47-361
               

               
Cow position:
               
chr22:10567650-10567935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
311, 93
               

               
Conread position:
               
47-363
               

               
Cow position:
               
chr22:7882616-7882303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
47-370
               

               
Cow position:
               
chr22:16621240-16620920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 201
               

               
Conread position:
               
47-378
               

               
Cow position:
               
chr22:37324608-37324286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 120
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr22:877579-877261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
96, 198
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr22:3993674-3993348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 89
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr22:17764443-17764113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr22:21295661-21295986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr22:34441569-34441897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 131
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr22:38439093-38439420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
47-380
               

               
Cow position:
               
chr22:14924668-14924987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
107, 96
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr22:15090806-15090473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr22:29290075-29290403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
48-304
               

               
Cow position:
               
chr22:36432910-36433156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr22:3908993-3908699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-350
               

               
Cow position:
               
chr22:22223250-22222960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr22:5384718-5384417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 215
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr22:16533137-16532842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr22:37066739-37067036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
48-358
               

               
Cow position:
               
chr22:7082089-7081784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
48-365
               

               
Cow position:
               
chr22:2627643-2627328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 210
               

               
Conread position:
               
48-365
               

               
Cow position:
               
chr22:4993847-4994169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
46, 117
               

               
Conread position:
               
48-365
               

               
Cow position:
               
chr22:32892756-32892448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
48-370
               

               
Cow position:
               
chr22:40120813-40121132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 145
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr22:4990104-4990427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr22:36562956-36563280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
101, 94
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr22:39472301-39472634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
57, 194
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr22:1484926-1484601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr22:11819640-11819964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr22:32326862-32326540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
304, 93
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:5290913-5290582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 218
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:6600619-6600948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:8418524-8418206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
180, 94
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:9372584-9372258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
89, 132
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:10983413-10983085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
104, 155
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:23830993-23830670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:25246975-25246648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
194, 62
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:28057987-28058303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 194
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr22:34398393-34398717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 219
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr22:23980145-23980486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-385
               

               
Cow position:
               
chr22:14143051-14143374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
92, 55
               

               
Conread position:
               
48-390
               

               
Cow position:
               
chr22:31213642-31213299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
93, 124
               

               
Conread position:
               
48-395
               

               
Cow position:
               
chr22:6494224-6493896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
48-414
               

               
Cow position:
               
chr22:7852027-7851658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
48-425
               

               
Cow position:
               
chr22:644705-645079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 56
               

               
Conread position:
               
48-426
               

               
Cow position:
               
chr22:16327560-16327178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr22:33448019-33448333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr22:6622185-6622507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
179, 102
               

               
Conread position:
               
50-313
               

               
Cow position:
               
chr22:15025049-15025299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
50-375
               

               
Cow position:
               
chr22:12681739-12682050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
90, 164
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr22:21568058-21567741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
178, 217
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr22:23857107-23856786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
50-426
               

               
Cow position:
               
chr22:1874754-1874377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
51-274
               

               
Cow position:
               
chr22:19428622-19428398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 111
               

               
Conread position:
               
51-374
               

               
Cow position:
               
chr22:44180653-44180336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 151
               

               
Conread position:
               
51-375
               

               
Cow position:
               
chr22:7885050-7884733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
51-379
               

               
Cow position:
               
chr22:34712786-34712452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
54-268
               

               
Cow position:
               
chr22:19173753-19173542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 88
               

               
Conread position:
               
55-379
               

               
Cow position:
               
chr22:4043989-4043671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
55-426
               

               
Cow position:
               
chr22:26166570-26166919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
56-379
               

               
Cow position:
               
chr22:27171211-27171521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 83
               

               
Conread position:
               
56-384
               

               
Cow position:
               
chr22:18020977-18021288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 97
               

               
Conread position:
               
57-252
               

               
Cow position:
               
chr22:34632189-34631996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
57-313
               

               
Cow position:
               
chr22:10677937-10678180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
70-219
               

               
Cow position:
               
chr22:285321-285467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-367
               

               
Cow position:
               
chr22:41270961-41271241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
75-367
               

               
Cow position:
               
chr22:12946138-12946416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
153, 68
               

               
Conread position:
               
77-356
               

               
Cow position:
               
chr22:43812387-43812656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
77-374
               

               
Cow position:
               
chr22:1987028-1986752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
281, 59
               

               
Conread position:
               
77-375
               

               
Cow position:
               
chr22:891108-891397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
100-379
               

               
Cow position:
               
chr22:36569540-36569804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 51
               

               
Conread position:
               
103-367
               

               
Cow position:
               
chr22:14816423-14816675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
250, 65
               
Show alignments to all cow chromosomes.