Cow genome map

Conread name: Utr2-C0001805_L19

Conread position: 2-328
Cow position:
Alignm length: 330
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 187

Conread position: 2-367
Cow position:
Alignm length: 376
Alignm identity: 253
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 34, 223

Conread position: 2-379
Cow position:
Alignm length: 385
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 269

Conread position: 3-362
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 113

Conread position: 8-373
Cow position:
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 70

Conread position: 8-375
Cow position:
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 129

Conread position: 9-202
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 9-208
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 9-266
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 85, 194

Conread position: 9-311
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 68

Conread position: 9-365
Cow position:
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 149

Conread position: 9-374
Cow position:
Alignm length: 367
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 245

Conread position: 9-387
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 117

Conread position: 10-364
Cow position:
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 11

Conread position: 13-241
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 127, 6

Conread position: 17-198
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 64

Conread position: 28-226
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 129, 0

Conread position: 32-214
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 120, 153

Conread position: 32-221
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 33-199
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 43

Conread position: 33-313
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 33-337
Cow position:
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 33-356
Cow position:
Alignm length: 324
Alignm identity: 211
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 146, 0

Conread position: 33-357
Cow position:
Alignm length: 335
Alignm identity: 224
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 168, 132

Conread position: 33-367
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 106

Conread position: 33-370
Cow position:
Alignm length: 340
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 200, 124

Conread position: 33-372
Cow position:
Alignm length: 341
Alignm identity: 232
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 195, 233

Conread position: 33-377
Cow position:
Alignm length: 345
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 34-362
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 106, 212

Conread position: 35-263
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 121

Conread position: 37-323
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 5

Conread position: 38-284
Cow position:
Alignm length: 248
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 190, 115

Conread position: 41-178
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 41-184
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 41-185
Cow position:
Alignm length: 145
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 41-187
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 41-193
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 41-203
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 121

Conread position: 41-204
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 158

Conread position: 41-222
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 110, 134

Conread position: 41-223
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 41-240
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 87, 100

Conread position: 41-249
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 104, 42

Conread position: 41-252
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 41-253
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 102

Conread position: 41-259
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 98, 164

Conread position: 41-268
Cow position:
Alignm length: 233
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 99, 11

Conread position: 41-277
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 86

Conread position: 41-288
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 105

Conread position: 41-303
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 100, 144

Conread position: 41-303
Cow position:
Alignm length: 264
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 114

Conread position: 41-319
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 227

Conread position: 41-321
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 69

Conread position: 41-370
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 101, 225

Conread position: 41-373
Cow position:
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 99

Conread position: 41-374
Cow position:
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 21

Conread position: 41-375
Cow position:
Alignm length: 339
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 223

Conread position: 41-375
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 104, 81

Conread position: 41-378
Cow position:
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 45

Conread position: 41-379
Cow position:
Alignm length: 344
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 146

Conread position: 41-379
Cow position:
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 91

Conread position: 41-379
Cow position:
Alignm length: 339
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 41-379
Cow position:
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 233

Conread position: 41-380
Cow position:
Alignm length: 342
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 312, 14

Conread position: 41-389
Cow position:
Alignm length: 354
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 67

Conread position: 41-389
Cow position:
Alignm length: 355
Alignm identity: 242
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 31

Conread position: 41-391
Cow position:
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 35

Conread position: 41-415
Cow position:
Alignm length: 390
Alignm identity: 260
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 7, 23

Conread position: 42-360
Cow position:
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 178

Conread position: 43-241
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 99

Conread position: 43-341
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 137

Conread position: 44-240
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 44-426
Cow position:
Alignm length: 395
Alignm identity: 255
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 118, 98

Conread position: 45-313
Cow position:
Alignm length: 275
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 137

Conread position: 45-325
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 102, 95

Conread position: 45-325
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 69

Conread position: 45-331
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 50, 190

Conread position: 45-367
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 154

Conread position: 45-374
Cow position:
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 31

Conread position: 45-379
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 216

Conread position: 45-379
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 103, 219

Conread position: 46-185
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 46-199
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 46-226
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 46-259
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 131

Conread position: 46-277
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 182, 96

Conread position: 46-277
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 93, 221

Conread position: 46-356
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 46-362
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 106

Conread position: 46-362
Cow position:
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 91

Conread position: 46-373
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 107

Conread position: 46-373
Cow position:
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 223

Conread position: 46-375
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 48, 98

Conread position: 46-375
Cow position:
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 87

Conread position: 46-375
Cow position:
Alignm length: 332
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 198, 92

Conread position: 46-375
Cow position:
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 46-375
Cow position:
Alignm length: 345
Alignm identity: 240
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 166

Conread position: 46-379
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 99

Conread position: 46-379
Cow position:
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 141

Conread position: 46-379
Cow position:
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 221

Conread position: 46-379
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 65, 136

Conread position: 47-328
Cow position:
Alignm length: 285
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 91, 42

Conread position: 47-375
Cow position:
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 29

Conread position: 47-384
Cow position:
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 142

Conread position: 48-215
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 28

Conread position: 48-325
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 69, 63

Conread position: 48-328
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 221

Conread position: 48-346
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 48-356
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 70, 65

Conread position: 48-375
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 214, 98

Conread position: 48-379
Cow position:
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 79

Conread position: 48-379
Cow position:
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 137

Conread position: 48-379
Cow position:
Alignm length: 336
Alignm identity: 219
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 81, 197

Conread position: 48-383
Cow position:
Alignm length: 340
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 24

Conread position: 48-384
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 93

Conread position: 49-378
Cow position:
Alignm length: 340
Alignm identity: 222
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 41, 233

Conread position: 49-379
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 89, 179

Conread position: 49-379
Cow position:
Alignm length: 341
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 117

Conread position: 50-277
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 50-284
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 90

Conread position: 50-335
Cow position:
Alignm length: 291
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 215

Conread position: 50-378
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 183, 107

Conread position: 51-378
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 103, 91

Conread position: 52-316
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 81

Conread position: 55-299
Cow position:
Alignm length: 247
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 173, 84

Conread position: 66-332
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 81-342
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 41

Conread position: 82-266
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 117

Show alignments to all cow chromosomes.