Cow genome map

Conread name: Utr2-C0001805_L19

Conread position: 2-301
Cow position: chr24:39143699-39143400 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 134, 44

Conread position: 2-379
Cow position: chr24:38815057-38814688 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 140

Conread position: 2-379
Cow position: chr24:42344907-42345291 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 273

Conread position: 2-388
Cow position: chr24:17407478-17407101 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 6

Conread position: 6-387
Cow position: chr24:33098389-33098780 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 132, 273

Conread position: 8-212
Cow position: chr24:37823609-37823406 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 195, 128

Conread position: 8-369
Cow position: chr24:24755529-24755182 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 185

Conread position: 8-375
Cow position: chr24:27748722-27748375 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 24

Conread position: 9-313
Cow position: chr24:16510058-16509756 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 68, 61

Conread position: 9-354
Cow position: chr24:10499295-10498951 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 60

Conread position: 9-373
Cow position: chr24:1269864-1269527 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 72

Conread position: 9-376
Cow position: chr24:29673602-29673239 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 16

Conread position: 9-379
Cow position: chr24:39849808-39850160 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 147, 67

Conread position: 10-379
Cow position: chr24:8886990-8886633 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 79, 131

Conread position: 11-409
Cow position: chr24:15057477-15057087 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 65

Conread position: 17-300
Cow position: chr24:6131799-6132080 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 126, 59

Conread position: 27-390
Cow position: chr24:41755925-41755573 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 129, 68

Conread position: 28-379
Cow position: chr24:11887219-11886879 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 48

Conread position: 33-214
Cow position: chr24:39523392-39523571 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 33-266
Cow position: chr24:37037959-37037723 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 201

Conread position: 33-326
Cow position: chr24:34396122-34396402 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 33-375
Cow position: chr24:32822714-32823061 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 98, 240

Conread position: 33-379
Cow position: chr24:15508487-15508817 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 37

Conread position: 33-379
Cow position: chr24:18484939-18485283 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 25

Conread position: 33-384
Cow position: chr24:27844471-27844808 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 146

Conread position: 34-233
Cow position: chr24:24662075-24662272 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 34-372
Cow position: chr24:19769545-19769222 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 116, 174

Conread position: 34-379
Cow position: chr24:3493940-3493610 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 318, 103

Conread position: 35-378
Cow position: chr24:43028274-43028608 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 56

Conread position: 35-384
Cow position: chr24:31812245-31811897 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 106

Conread position: 38-379
Cow position: chr24:212039-211698 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 122

Conread position: 39-306
Cow position: chr24:16089279-16089024 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 91

Conread position: 41-179
Cow position: chr24:27284865-27284731 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 99, 32

Conread position: 41-184
Cow position: chr24:13948169-13948027 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 30

Conread position: 41-189
Cow position: chr24:28043024-28042873 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 41-193
Cow position: chr24:30308504-30308660 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 41-206
Cow position: chr24:37974932-37975097 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 140

Conread position: 41-214
Cow position: chr24:39791590-39791415 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 109, 0

Conread position: 41-264
Cow position: chr24:19736285-19736502 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 156

Conread position: 41-289
Cow position: chr24:30897487-30897734 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 226

Conread position: 41-320
Cow position: chr24:31359370-31359099 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 41-340
Cow position: chr24:24457201-24457491 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 187, 99

Conread position: 41-346
Cow position: chr24:27824511-27824215 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 151

Conread position: 41-353
Cow position: chr24:43927284-43927580 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 99, 35

Conread position: 41-373
Cow position: chr24:28062997-28062668 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 57

Conread position: 41-373
Cow position: chr24:30313977-30314313 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 230

Conread position: 41-374
Cow position: chr24:18732053-18732401 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 94, 245

Conread position: 41-375
Cow position: chr24:5754885-5754562 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 139

Conread position: 41-375
Cow position: chr24:24250771-24250453 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 45

Conread position: 41-376
Cow position: chr24:35675588-35675263 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 98

Conread position: 41-379
Cow position: chr24:201588-201916 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 142

Conread position: 41-379
Cow position: chr24:3165867-3165538 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 175

Conread position: 41-379
Cow position: chr24:5141991-5141658 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 41-379
Cow position: chr24:17104521-17104850 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 102

Conread position: 41-379
Cow position: chr24:20741372-20741039 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 185

Conread position: 41-379
Cow position: chr24:28319160-28319485 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 143, 93

Conread position: 41-379
Cow position: chr24:28496533-28496871 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 130

Conread position: 41-379
Cow position: chr24:34272859-34272519 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 73

Conread position: 41-384
Cow position: chr24:6150072-6149742 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 104, 123

Conread position: 41-398
Cow position: chr24:11119326-11118978 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 88

Conread position: 41-417
Cow position: chr24:31324334-31323967 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 228

Conread position: 42-362
Cow position: chr24:45004995-45004688 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 105, 136

Conread position: 43-378
Cow position: chr24:24490970-24491296 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 133

Conread position: 45-239
Cow position: chr24:36008531-36008336 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 108, 95

Conread position: 45-328
Cow position: chr24:20249851-20250135 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 95

Conread position: 45-379
Cow position: chr24:2392231-2391908 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 71

Conread position: 45-379
Cow position: chr24:19465872-19466216 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 65

Conread position: 45-379
Cow position: chr24:23616741-23616412 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 68

Conread position: 45-379
Cow position: chr24:25321030-25320706 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 94

Conread position: 46-266
Cow position: chr24:16895393-16895612 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 93

Conread position: 46-266
Cow position: chr24:18357008-18357229 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 99, 131

Conread position: 46-335
Cow position: chr24:33221896-33222178 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 221

Conread position: 46-336
Cow position: chr24:34008529-34008821 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 224

Conread position: 46-373
Cow position: chr24:36404098-36404424 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 114

Conread position: 46-375
Cow position: chr24:11840231-11839900 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 94, 106

Conread position: 46-375
Cow position: chr24:33230718-33230386 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 44

Conread position: 46-378
Cow position: chr24:2402324-2402656 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 96

Conread position: 46-378
Cow position: chr24:15246599-15246918 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 99

Conread position: 46-378
Cow position: chr24:16869739-16870068 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 67

Conread position: 46-378
Cow position: chr24:32054705-32054389 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 110, 199

Conread position: 46-379
Cow position: chr24:18741528-18741854 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 182, 107

Conread position: 46-379
Cow position: chr24:25885115-25885441 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 21

Conread position: 46-379
Cow position: chr24:37650718-37650387 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 90

Conread position: 46-388
Cow position: chr24:27725968-27726296 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 203

Conread position: 47-262
Cow position: chr24:24061765-24061974 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 107, 18

Conread position: 47-304
Cow position: chr24:28990604-28990358 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 31, 25

Conread position: 48-222
Cow position: chr24:27713363-27713536 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 148

Conread position: 48-268
Cow position: chr24:19000089-18999869 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 160, 91

Conread position: 48-269
Cow position: chr24:18017269-18017047 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 185, 109

Conread position: 48-312
Cow position: chr24:5632989-5633252 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 94

Conread position: 48-322
Cow position: chr24:22225229-22224952 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 44, 104

Conread position: 48-335
Cow position: chr24:17284944-17285236 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 142

Conread position: 48-379
Cow position: chr24:29595767-29596094 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 92

Conread position: 48-387
Cow position: chr24:3430775-3430444 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 43

Conread position: 49-379
Cow position: chr24:30229514-30229183 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 152

Conread position: 50-378
Cow position: chr24:7914046-7913716 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 87

Conread position: 50-379
Cow position: chr24:26928904-26929232 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 68, 60

Conread position: 53-379
Cow position: chr24:20024650-20024324 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 87

Conread position: 55-311
Cow position: chr24:40673386-40673651 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 42, 107

Conread position: 57-318
Cow position: chr24:39833482-39833737 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 57-379
Cow position: chr24:27608065-27608377 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 142

Conread position: 59-377
Cow position: chr24:28303334-28303629 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 118

Conread position: 81-375
Cow position: chr24:30178250-30177957 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 188

Conread position: 98-370
Cow position: chr24:17363656-17363919 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 82

Show alignments to all cow chromosomes.