Cow genome map


           Conread name:
           Utr2-C0001805_L19
        

               Conread position:
               2-301
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               134, 44
               

               Conread position:
               2-379
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               40, 140
               

               Conread position:
               2-379
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 273
               

               Conread position:
               2-388
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               34, 6
               

               Conread position:
               6-387
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               132, 273
               

               Conread position:
               8-212
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               195, 128
               

               Conread position:
               8-369
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               121, 185
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               9-313
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               68, 61
               

               Conread position:
               9-354
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 60
               

               Conread position:
               9-373
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 72
               

               Conread position:
               9-376
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 16
               

               Conread position:
               9-379
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               256
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               147, 67
               

               Conread position:
               10-379
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               79, 131
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               17-300
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               126, 59
               

               Conread position:
               27-390
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               129, 68
               

               Conread position:
               28-379
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 48
               

               Conread position:
               33-214
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               33-266
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 201
               

               Conread position:
               33-326
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               33-375
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               98, 240
               

               Conread position:
               33-379
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               33-379
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 25
               

               Conread position:
               33-384
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 146
               

               Conread position:
               34-233
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               34-372
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               116, 174
               

               Conread position:
               34-379
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               318, 103
               

               Conread position:
               35-378
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 56
               

               Conread position:
               35-384
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 106
               

               Conread position:
               38-379
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 122
               

               Conread position:
               39-306
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               116, 91
               

               Conread position:
               41-179
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               99, 32
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               113, 30
               

               Conread position:
               41-189
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               41-193
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               41-206
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 140
               

               Conread position:
               41-214
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               41-264
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               92, 156
               

               Conread position:
               41-289
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 226
               

               Conread position:
               41-320
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               41-340
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               187, 99
               

               Conread position:
               41-346
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               105, 151
               

               Conread position:
               41-353
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               99, 35
               

               Conread position:
               41-373
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               41-373
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 230
               

               Conread position:
               41-374
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               94, 245
               

               Conread position:
               41-375
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 139
               

               Conread position:
               41-375
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               41-376
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 98
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 142
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 175
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 102
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               109, 185
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               143, 93
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 130
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               41-384
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               104, 123
               

               Conread position:
               41-398
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 88
               

               Conread position:
               41-417
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 228
               

               Conread position:
               42-362
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 136
               

               Conread position:
               43-378
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 133
               

               Conread position:
               45-239
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 95
               

               Conread position:
               45-328
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               104, 95
               

               Conread position:
               45-379
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               45-379
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               45-379
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               45-379
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 94
               

               Conread position:
               46-266
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 93
               

               Conread position:
               46-266
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               99, 131
               

               Conread position:
               46-335
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 221
               

               Conread position:
               46-336
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 224
               

               Conread position:
               46-373
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 114
               

               Conread position:
               46-375
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               94, 106
               

               Conread position:
               46-375
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               46-378
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 96
               

               Conread position:
               46-378
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 99
               

               Conread position:
               46-378
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 67
               

               Conread position:
               46-378
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               110, 199
               

               Conread position:
               46-379
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               182, 107
               

               Conread position:
               46-379
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               46-379
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 90
               

               Conread position:
               46-388
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 203
               

               Conread position:
               47-262
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               107, 18
               

               Conread position:
               47-304
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               48-222
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 148
               

               Conread position:
               48-268
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               160, 91
               

               Conread position:
               48-269
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               185, 109
               

               Conread position:
               48-312
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               107, 94
               

               Conread position:
               48-322
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               44, 104
               

               Conread position:
               48-335
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 142
               

               Conread position:
               48-379
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 92
               

               Conread position:
               48-387
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               49-379
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 152
               

               Conread position:
               50-378
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 87
               

               Conread position:
               50-379
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               53-379
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 87
               

               Conread position:
               55-311
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               57-318
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               57-379
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 142
               

               Conread position:
               59-377
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 118
               

               Conread position:
               81-375
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 188
               

               Conread position:
               98-370
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               61, 82
               
Show alignments to all cow chromosomes.