Cow genome map


           Conread name:
           Utr2-C0001805_L19
        

               Conread position:
               2-352
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 97
               

               Conread position:
               2-378
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               6-294
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               140, 182
               

               Conread position:
               9-136
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-214
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               112, 106
               

               Conread position:
               9-241
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               9-253
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 88
               

               Conread position:
               9-266
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               9-379
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               9-379
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               133, 192
               

               Conread position:
               10-379
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               343, 212
               

               Conread position:
               12-158
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               12-379
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               136, 8
               

               Conread position:
               21-313
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 251
               

               Conread position:
               25-379
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 64
               

               Conread position:
               28-237
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               28-313
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               196, 118
               

               Conread position:
               28-375
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 102
               

               Conread position:
               32-297
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               114, 37
               

               Conread position:
               33-284
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               107, 43
               

               Conread position:
               33-291
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               61, 238
               

               Conread position:
               33-369
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               195, 53
               

               Conread position:
               33-375
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               33-379
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 197
               

               Conread position:
               34-285
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               167, 108
               

               Conread position:
               34-292
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               119, 108
               

               Conread position:
               34-308
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               184, 232
               

               Conread position:
               34-313
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               115, 122
               

               Conread position:
               34-388
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               110, 210
               

               Conread position:
               35-266
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               111, 11
               

               Conread position:
               35-378
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               318, 118
               

               Conread position:
               39-386
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               79, 104
               

               Conread position:
               41-172
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               41-198
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               41-228
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               41-237
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               41-290
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               64, 204
               

               Conread position:
               41-294
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               41-351
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 162
               

               Conread position:
               41-356
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 101
               

               Conread position:
               41-369
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 96
               

               Conread position:
               41-373
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 226
               

               Conread position:
               41-378
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               193, 128
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 224
               

               Conread position:
               41-379
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               41-380
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 151
               

               Conread position:
               41-408
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 141
               

               Conread position:
               44-374
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               45-267
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               45-279
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               45-357
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               45-357
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               45-375
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 120
               

               Conread position:
               45-379
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               183, 106
               

               Conread position:
               46-222
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               103, 110
               

               Conread position:
               46-263
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               111, 141
               

               Conread position:
               46-266
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               188, 96
               

               Conread position:
               46-280
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               105, 156
               

               Conread position:
               46-368
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               46-372
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               46-373
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 51
               

               Conread position:
               46-379
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               313, 58
               

               Conread position:
               47-223
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               71, 66
               

               Conread position:
               47-324
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 95
               

               Conread position:
               47-378
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               181, 75
               

               Conread position:
               48-252
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               48-269
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 92
               

               Conread position:
               48-273
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 117
               

               Conread position:
               48-312
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               133, 91
               

               Conread position:
               48-313
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 133
               

               Conread position:
               48-313
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               185, 93
               

               Conread position:
               48-344
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 106
               

               Conread position:
               48-364
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               180, 94
               

               Conread position:
               48-367
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 68
               

               Conread position:
               48-378
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               92, 79
               

               Conread position:
               48-379
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               92, 160
               

               Conread position:
               49-365
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 207
               

               Conread position:
               49-375
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 97
               

               Conread position:
               49-383
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               91, 154
               

               Conread position:
               50-348
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 136
               

               Conread position:
               57-337
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               69-367
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 203
               

               Conread position:
               81-356
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 111
               

               Conread position:
               91-277
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 88
               

               Conread position:
               157-448
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               78, 112
               
Show alignments to all cow chromosomes.