Cow genome map
| Conread name: | Utr2-C0001805_L19 |
| Conread position: | 2-352 |
| Cow position: | chr26:24629863-24629533 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 2-378 |
| Cow position: | chr26:14174429-14174055 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 6-294 |
| Cow position: | chr26:22892320-22892605 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 140, 182 |
| Conread position: | 9-136 |
| Cow position: | chr26:33242011-33241884 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-214 |
| Cow position: | chr26:23924972-23924765 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 112, 106 |
| Conread position: | 9-241 |
| Cow position: | chr26:31137344-31137559 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 9-253 |
| Cow position: | chr26:647604-647842 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 135, 88 |
| Conread position: | 9-266 |
| Cow position: | chr26:14905686-14905945 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 9-379 |
| Cow position: | chr26:8307406-8307747 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 9-379 |
| Cow position: | chr26:12144996-12145346 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 133, 192 |
| Conread position: | 10-379 |
| Cow position: | chr26:8699926-8700292 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 212 |
| Conread position: | 12-158 |
| Cow position: | chr26:34611063-34611208 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 12-379 |
| Cow position: | chr26:22658715-22659074 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 136, 8 |
| Conread position: | 21-313 |
| Cow position: | chr26:23315887-23315591 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 251 |
| Conread position: | 25-379 |
| Cow position: | chr26:13802217-13801869 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 64 |
| Conread position: | 28-237 |
| Cow position: | chr26:32566114-32565910 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 28-313 |
| Cow position: | chr26:34060436-34060158 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 196, 118 |
| Conread position: | 28-375 |
| Cow position: | chr26:32652631-32652961 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 102 |
| Conread position: | 32-297 |
| Cow position: | chr26:19446231-19445959 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 33-284 |
| Cow position: | chr26:12964599-12964850 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 107, 43 |
| Conread position: | 33-291 |
| Cow position: | chr26:28251254-28250990 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 33-369 |
| Cow position: | chr26:21243193-21242872 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 195, 53 |
| Conread position: | 33-375 |
| Cow position: | chr26:18825184-18825511 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 136 |
| Conread position: | 33-379 |
| Cow position: | chr26:8353067-8352717 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 197 |
| Conread position: | 34-285 |
| Cow position: | chr26:22152324-22152071 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 167, 108 |
| Conread position: | 34-292 |
| Cow position: | chr26:23582848-23583104 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 119, 108 |
| Conread position: | 34-308 |
| Cow position: | chr26:22249380-22249652 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 184, 232 |
| Conread position: | 34-313 |
| Cow position: | chr26:22354510-22354238 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 115, 122 |
| Conread position: | 34-388 |
| Cow position: | chr26:5246381-5246739 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 110, 210 |
| Conread position: | 35-266 |
| Cow position: | chr26:9535613-9535383 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 35-378 |
| Cow position: | chr26:3706888-3706559 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 318, 118 |
| Conread position: | 39-386 |
| Cow position: | chr26:21418360-21418700 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 79, 104 |
| Conread position: | 41-172 |
| Cow position: | chr26:19636384-19636249 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 41-198 |
| Cow position: | chr26:26537431-26537593 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 41-228 |
| Cow position: | chr26:7687155-7687337 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 41-237 |
| Cow position: | chr26:24240769-24240570 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 41-290 |
| Cow position: | chr26:2739365-2739616 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 64, 204 |
| Conread position: | 41-294 |
| Cow position: | chr26:16721954-16721707 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 101 |
| Conread position: | 41-351 |
| Cow position: | chr26:21636947-21637250 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 162 |
| Conread position: | 41-356 |
| Cow position: | chr26:31605496-31605188 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 101 |
| Conread position: | 41-369 |
| Cow position: | chr26:20291602-20291914 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 96 |
| Conread position: | 41-373 |
| Cow position: | chr26:32897779-32898107 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 226 |
| Conread position: | 41-378 |
| Cow position: | chr26:9104191-9104522 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 193, 128 |
| Conread position: | 41-379 |
| Cow position: | chr26:13021055-13021391 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 224 |
| Conread position: | 41-379 |
| Cow position: | chr26:33201980-33202300 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 41-380 |
| Cow position: | chr26:26888043-26888377 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 151 |
| Conread position: | 41-408 |
| Cow position: | chr26:35704478-35704112 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 141 |
| Conread position: | 44-374 |
| Cow position: | chr26:33096471-33096803 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 45-267 |
| Cow position: | chr26:4807640-4807428 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 45-279 |
| Cow position: | chr26:31903253-31903019 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 45-357 |
| Cow position: | chr26:23142018-23142317 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 45-357 |
| Cow position: | chr26:33857107-33857415 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 45-375 |
| Cow position: | chr26:4363386-4363067 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 120 |
| Conread position: | 45-379 |
| Cow position: | chr26:32683202-32682872 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 183, 106 |
| Conread position: | 46-222 |
| Cow position: | chr26:677895-678070 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 110 |
| Conread position: | 46-263 |
| Cow position: | chr26:19110269-19110053 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 111, 141 |
| Conread position: | 46-266 |
| Cow position: | chr26:31633813-31633591 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 188, 96 |
| Conread position: | 46-280 |
| Cow position: | chr26:20769936-20769709 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 105, 156 |
| Conread position: | 46-368 |
| Cow position: | chr26:19774214-19774534 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 46-372 |
| Cow position: | chr26:27491416-27491738 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 30 |
| Conread position: | 46-373 |
| Cow position: | chr26:33112301-33112620 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 51 |
| Conread position: | 46-379 |
| Cow position: | chr26:3071890-3072205 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 313, 58 |
| Conread position: | 47-223 |
| Cow position: | chr26:6514927-6514750 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 71, 66 |
| Conread position: | 47-324 |
| Cow position: | chr26:14175366-14175095 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 95 |
| Conread position: | 47-378 |
| Cow position: | chr26:32601434-32601110 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 181, 75 |
| Conread position: | 48-252 |
| Cow position: | chr26:12893344-12893542 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 48-269 |
| Cow position: | chr26:33253233-33253459 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 92 |
| Conread position: | 48-273 |
| Cow position: | chr26:23848710-23848945 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 48-312 |
| Cow position: | chr26:25299682-25299422 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 133, 91 |
| Conread position: | 48-313 |
| Cow position: | chr26:829888-829633 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 91, 133 |
| Conread position: | 48-313 |
| Cow position: | chr26:16179645-16179384 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 185, 93 |
| Conread position: | 48-344 |
| Cow position: | chr26:9604645-9604355 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 132, 106 |
| Conread position: | 48-364 |
| Cow position: | chr26:21992185-21991885 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 180, 94 |
| Conread position: | 48-367 |
| Cow position: | chr26:10091768-10091447 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 68 |
| Conread position: | 48-378 |
| Cow position: | chr26:14951060-14951393 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 92, 79 |
| Conread position: | 48-379 |
| Cow position: | chr26:19459776-19459430 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 160 |
| Conread position: | 49-365 |
| Cow position: | chr26:4854627-4854309 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 207 |
| Conread position: | 49-375 |
| Cow position: | chr26:8811209-8810894 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 97 |
| Conread position: | 49-383 |
| Cow position: | chr26:31856791-31856463 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 91, 154 |
| Conread position: | 50-348 |
| Cow position: | chr26:25526330-25526036 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 136 |
| Conread position: | 57-337 |
| Cow position: | chr26:20013552-20013280 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 69-367 |
| Cow position: | chr26:5307205-5306902 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 203 |
| Conread position: | 81-356 |
| Cow position: | chr26:2345597-2345861 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 91-277 |
| Cow position: | chr26:7156011-7155831 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 157-448 |
| Cow position: | chr26:27594606-27594309 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 78, 112 |
Show alignments to all cow chromosomes.