Cow genome map

Conread name: Utr2-C0001805_L19

Conread position: 2-273
Cow position:
Alignm length: 275
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 77

Conread position: 2-288
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 38, 184

Conread position: 2-326
Cow position:
Alignm length: 331
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 65

Conread position: 2-352
Cow position:
Alignm length: 353
Alignm identity: 232
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 34, 127

Conread position: 2-379
Cow position:
Alignm length: 387
Alignm identity: 265
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 47

Conread position: 9-178
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 37

Conread position: 9-210
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 140, 88

Conread position: 9-367
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 137, 0

Conread position: 9-372
Cow position:
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 133

Conread position: 9-374
Cow position:
Alignm length: 370
Alignm identity: 248
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 138, 19

Conread position: 9-379
Cow position:
Alignm length: 372
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 88

Conread position: 10-201
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 136, 69

Conread position: 10-368
Cow position:
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 12

Conread position: 13-379
Cow position:
Alignm length: 371
Alignm identity: 248
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 216, 10

Conread position: 14-379
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 135, 9

Conread position: 24-379
Cow position:
Alignm length: 361
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 121

Conread position: 28-337
Cow position:
Alignm length: 316
Alignm identity: 211
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 238

Conread position: 30-274
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 30-288
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 6, 132

Conread position: 32-250
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 120

Conread position: 32-379
Cow position:
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 32-379
Cow position:
Alignm length: 350
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 148

Conread position: 33-241
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 106, 155

Conread position: 33-266
Cow position:
Alignm length: 236
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 117, 98

Conread position: 33-288
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 247, 43

Conread position: 33-374
Cow position:
Alignm length: 344
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 117, 164

Conread position: 33-379
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 33-379
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 182, 242

Conread position: 34-252
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 34-379
Cow position:
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 35-292
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 5, 88

Conread position: 35-379
Cow position:
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 109

Conread position: 39-204
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 39-222
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 39-372
Cow position:
Alignm length: 341
Alignm identity: 233
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 74

Conread position: 39-375
Cow position:
Alignm length: 342
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 38

Conread position: 39-379
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 100

Conread position: 39-383
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 115

Conread position: 41-144
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 41-178
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 94

Conread position: 41-193
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 41-214
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 107, 0

Conread position: 41-266
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 113, 0

Conread position: 41-288
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 41-299
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 105, 165

Conread position: 41-300
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 104, 45

Conread position: 41-311
Cow position:
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 41-319
Cow position:
Alignm length: 282
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 43

Conread position: 41-337
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 180, 98

Conread position: 41-346
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 110, 81

Conread position: 41-352
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 5, 49

Conread position: 41-356
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 192, 96

Conread position: 41-357
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 115, 102

Conread position: 41-369
Cow position:
Alignm length: 335
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 41-373
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 9

Conread position: 41-375
Cow position:
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 146

Conread position: 41-375
Cow position:
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 69

Conread position: 41-375
Cow position:
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 57

Conread position: 41-375
Cow position:
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 15

Conread position: 41-376
Cow position:
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 227

Conread position: 41-378
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 37

Conread position: 41-379
Cow position:
Alignm length: 344
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 226

Conread position: 41-379
Cow position:
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 35

Conread position: 41-379
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 227

Conread position: 41-379
Cow position:
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 47

Conread position: 41-379
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 41-383
Cow position:
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 41-384
Cow position:
Alignm length: 349
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 115

Conread position: 41-384
Cow position:
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 140

Conread position: 42-370
Cow position:
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 112

Conread position: 43-287
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 185, 5

Conread position: 43-371
Cow position:
Alignm length: 334
Alignm identity: 226
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 107, 43

Conread position: 43-374
Cow position:
Alignm length: 333
Alignm identity: 223
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 312, 96

Conread position: 45-266
Cow position:
Alignm length: 227
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 157

Conread position: 45-346
Cow position:
Alignm length: 306
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 185

Conread position: 45-356
Cow position:
Alignm length: 315
Alignm identity: 209
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 183, 85

Conread position: 45-375
Cow position:
Alignm length: 332
Alignm identity: 223
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 313, 94

Conread position: 45-379
Cow position:
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 65

Conread position: 45-379
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 94, 27

Conread position: 45-379
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 156

Conread position: 45-379
Cow position:
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 90

Conread position: 46-187
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 46-188
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 46-232
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 80

Conread position: 46-322
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 46-340
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 100, 151

Conread position: 46-373
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 182, 90

Conread position: 46-373
Cow position:
Alignm length: 328
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 46-376
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 46-379
Cow position:
Alignm length: 349
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 26

Conread position: 46-379
Cow position:
Alignm length: 354
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 232

Conread position: 46-379
Cow position:
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 46-379
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 96

Conread position: 46-379
Cow position:
Alignm length: 335
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 312, 80

Conread position: 46-392
Cow position:
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 220

Conread position: 47-297
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 99, 66

Conread position: 47-310
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 145

Conread position: 47-319
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 98, 34

Conread position: 47-355
Cow position:
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 40

Conread position: 48-173
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 48-308
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 62

Conread position: 48-310
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 185, 74

Conread position: 48-313
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 116

Conread position: 48-325
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 108

Conread position: 48-334
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 225

Conread position: 48-340
Cow position:
Alignm length: 296
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 66

Conread position: 48-362
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 179, 94

Conread position: 48-367
Cow position:
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 48-371
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 74

Conread position: 48-375
Cow position:
Alignm length: 333
Alignm identity: 232
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 88, 62

Conread position: 48-377
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 71

Conread position: 48-378
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 220

Conread position: 48-379
Cow position:
Alignm length: 338
Alignm identity: 226
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 96, 140

Conread position: 48-379
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 185, 94

Conread position: 48-379
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 185, 43

Conread position: 48-379
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 97, 183

Conread position: 48-391
Cow position:
Alignm length: 357
Alignm identity: 241
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 91, 212

Conread position: 49-268
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 95, 124

Conread position: 49-379
Cow position:
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 153

Conread position: 49-379
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 184, 92

Conread position: 50-260
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 63

Conread position: 50-375
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 93, 224

Conread position: 50-379
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 61, 225

Conread position: 52-350
Cow position:
Alignm length: 304
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 155, 103

Conread position: 54-379
Cow position:
Alignm length: 332
Alignm identity: 223
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 86, 131

Conread position: 55-303
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 74, 210

Conread position: 61-367
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 167, 84

Conread position: 61-379
Cow position:
Alignm length: 321
Alignm identity: 231
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 84, 36

Conread position: 64-206
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 67-379
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 68-269
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 77-366
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 62, 142

Conread position: 78-259
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 98-379
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 62

Conread position: 100-379
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 42

Show alignments to all cow chromosomes.