Cow genome map
| Conread name: | Utr2-C0001805_L19 |
| Conread position: | 2-273 |
| Cow position: | chr29:25814725-25814995 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 2-288 |
| Cow position: | chr29:31674745-31674456 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 38, 184 |
| Conread position: | 2-326 |
| Cow position: | chr29:26270179-26269862 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 2-352 |
| Cow position: | chr29:19253717-19254055 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 2-379 |
| Cow position: | chr29:15738228-15738604 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 9-178 |
| Cow position: | chr29:38978633-38978464 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 142, 37 |
| Conread position: | 9-210 |
| Cow position: | chr29:23155329-23155131 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 140, 88 |
| Conread position: | 9-367 |
| Cow position: | chr29:40853031-40852688 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 9-372 |
| Cow position: | chr29:5892948-5892594 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 133 |
| Conread position: | 9-374 |
| Cow position: | chr29:9912278-9911922 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 138, 19 |
| Conread position: | 9-379 |
| Cow position: | chr29:4480070-4480432 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 88 |
| Conread position: | 10-201 |
| Cow position: | chr29:20770446-20770255 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 136, 69 |
| Conread position: | 10-368 |
| Cow position: | chr29:20903189-20903537 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 12 |
| Conread position: | 13-379 |
| Cow position: | chr29:21933023-21933373 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 216, 10 |
| Conread position: | 14-379 |
| Cow position: | chr29:3237256-3237619 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 135, 9 |
| Conread position: | 24-379 |
| Cow position: | chr29:2071481-2071828 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 28-337 |
| Cow position: | chr29:35677459-35677762 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 102, 238 |
| Conread position: | 30-274 |
| Cow position: | chr29:24046080-24045829 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 30-288 |
| Cow position: | chr29:29942643-29942905 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 132 |
| Conread position: | 32-250 |
| Cow position: | chr29:4002972-4002759 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 120 |
| Conread position: | 32-379 |
| Cow position: | chr29:19762349-19762012 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 32-379 |
| Cow position: | chr29:36530947-36530603 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 148 |
| Conread position: | 33-241 |
| Cow position: | chr29:34358899-34359108 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 106, 155 |
| Conread position: | 33-266 |
| Cow position: | chr29:40959770-40960001 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 117, 98 |
| Conread position: | 33-288 |
| Cow position: | chr29:27826599-27826353 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 247, 43 |
| Conread position: | 33-374 |
| Cow position: | chr29:356400-356071 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 117, 164 |
| Conread position: | 33-379 |
| Cow position: | chr29:109766-109450 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 33-379 |
| Cow position: | chr29:32290688-32290342 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 182, 242 |
| Conread position: | 34-252 |
| Cow position: | chr29:27329971-27329753 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-379 |
| Cow position: | chr29:39567760-39567428 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 35-292 |
| Cow position: | chr29:23243800-23244057 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 5, 88 |
| Conread position: | 35-379 |
| Cow position: | chr29:5098688-5099022 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 109 |
| Conread position: | 39-204 |
| Cow position: | chr29:21666160-21665996 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 39-222 |
| Cow position: | chr29:21941674-21941490 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 39-372 |
| Cow position: | chr29:21443265-21443597 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 39-375 |
| Cow position: | chr29:10058463-10058783 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 104, 38 |
| Conread position: | 39-379 |
| Cow position: | chr29:26672838-26673163 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 100 |
| Conread position: | 39-383 |
| Cow position: | chr29:9709768-9709435 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 115 |
| Conread position: | 41-144 |
| Cow position: | chr29:23825139-23825242 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-178 |
| Cow position: | chr29:38980002-38980136 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 41-193 |
| Cow position: | chr29:18012629-18012474 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 41-214 |
| Cow position: | chr29:24578934-24578757 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 41-266 |
| Cow position: | chr29:29314581-29314808 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 41-288 |
| Cow position: | chr29:44682033-44682269 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 41-299 |
| Cow position: | chr29:43099674-43099925 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 105, 165 |
| Conread position: | 41-300 |
| Cow position: | chr29:10235063-10235310 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 41-311 |
| Cow position: | chr29:32211000-32211251 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 41-319 |
| Cow position: | chr29:25092177-25091910 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 41-337 |
| Cow position: | chr29:40298949-40299230 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 180, 98 |
| Conread position: | 41-346 |
| Cow position: | chr29:1229678-1229382 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 110, 81 |
| Conread position: | 41-352 |
| Cow position: | chr29:40763622-40763917 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 5, 49 |
| Conread position: | 41-356 |
| Cow position: | chr29:24292939-24292642 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 192, 96 |
| Conread position: | 41-357 |
| Cow position: | chr29:868846-868535 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 115, 102 |
| Conread position: | 41-369 |
| Cow position: | chr29:25737343-25737667 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 120 |
| Conread position: | 41-373 |
| Cow position: | chr29:39111241-39111562 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 41-375 |
| Cow position: | chr29:8926390-8926715 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 146 |
| Conread position: | 41-375 |
| Cow position: | chr29:16609819-16609482 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 41-375 |
| Cow position: | chr29:26778953-26778628 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 41-375 |
| Cow position: | chr29:40117642-40117316 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 41-376 |
| Cow position: | chr29:22162178-22162510 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 227 |
| Conread position: | 41-378 |
| Cow position: | chr29:29769280-29769605 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 41-379 |
| Cow position: | chr29:2744196-2744532 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 226 |
| Conread position: | 41-379 |
| Cow position: | chr29:17110028-17109710 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 35 |
| Conread position: | 41-379 |
| Cow position: | chr29:22613501-22613175 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 227 |
| Conread position: | 41-379 |
| Cow position: | chr29:28196937-28197268 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 41-379 |
| Cow position: | chr29:36217183-36216858 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 41-383 |
| Cow position: | chr29:35501583-35501912 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 41-384 |
| Cow position: | chr29:465328-465667 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 115 |
| Conread position: | 41-384 |
| Cow position: | chr29:40166315-40165977 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 140 |
| Conread position: | 42-370 |
| Cow position: | chr29:11562683-11562363 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 112 |
| Conread position: | 43-287 |
| Cow position: | chr29:4085377-4085148 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 185, 5 |
| Conread position: | 43-371 |
| Cow position: | chr29:35405723-35406046 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 107, 43 |
| Conread position: | 43-374 |
| Cow position: | chr29:7955921-7956239 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 312, 96 |
| Conread position: | 45-266 |
| Cow position: | chr29:10018646-10018421 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 157 |
| Conread position: | 45-346 |
| Cow position: | chr29:23844905-23844605 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 95, 185 |
| Conread position: | 45-356 |
| Cow position: | chr29:7966313-7966010 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 183, 85 |
| Conread position: | 45-375 |
| Cow position: | chr29:2188289-2188593 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 313, 94 |
| Conread position: | 45-379 |
| Cow position: | chr29:86944-87277 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 45-379 |
| Cow position: | chr29:4624932-4625253 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 45-379 |
| Cow position: | chr29:14501660-14501334 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 95, 156 |
| Conread position: | 45-379 |
| Cow position: | chr29:29975105-29974781 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 90 |
| Conread position: | 46-187 |
| Cow position: | chr29:41112815-41112949 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 46-188 |
| Cow position: | chr29:23220433-23220577 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 46-232 |
| Cow position: | chr29:27846530-27846350 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 80 |
| Conread position: | 46-322 |
| Cow position: | chr29:43009018-43009287 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 46-340 |
| Cow position: | chr29:463588-463874 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 100, 151 |
| Conread position: | 46-373 |
| Cow position: | chr29:6293412-6293721 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 182, 90 |
| Conread position: | 46-373 |
| Cow position: | chr29:12680222-12679901 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 46-376 |
| Cow position: | chr29:17222479-17222151 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 67 |
| Conread position: | 46-379 |
| Cow position: | chr29:1022362-1022018 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 46-379 |
| Cow position: | chr29:4874813-4875163 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 232 |
| Conread position: | 46-379 |
| Cow position: | chr29:15940564-15940898 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 46-379 |
| Cow position: | chr29:21196583-21196910 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 96 |
| Conread position: | 46-379 |
| Cow position: | chr29:40337471-40337784 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 312, 80 |
| Conread position: | 46-392 |
| Cow position: | chr29:26615654-26616000 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 220 |
| Conread position: | 47-297 |
| Cow position: | chr29:27588988-27588743 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 99, 66 |
| Conread position: | 47-310 |
| Cow position: | chr29:5186428-5186689 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 145 |
| Conread position: | 47-319 |
| Cow position: | chr29:9718707-9718972 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 47-355 |
| Cow position: | chr29:24103476-24103784 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 48-173 |
| Cow position: | chr29:31477049-31477177 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 48-308 |
| Cow position: | chr29:27652564-27652818 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 48-310 |
| Cow position: | chr29:44988726-44988972 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 185, 74 |
| Conread position: | 48-313 |
| Cow position: | chr29:26259548-26259282 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 48-325 |
| Cow position: | chr29:22690289-22690014 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 94, 108 |
| Conread position: | 48-334 |
| Cow position: | chr29:30441001-30440711 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 225 |
| Conread position: | 48-340 |
| Cow position: | chr29:28739689-28739408 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 48-362 |
| Cow position: | chr29:17409399-17409086 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 179, 94 |
| Conread position: | 48-367 |
| Cow position: | chr29:34773673-34773975 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 48-371 |
| Cow position: | chr29:1556995-1556680 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 48-375 |
| Cow position: | chr29:34745594-34745910 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 88, 62 |
| Conread position: | 48-377 |
| Cow position: | chr29:20428900-20429231 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 48-378 |
| Cow position: | chr29:43328708-43328378 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 220 |
| Conread position: | 48-379 |
| Cow position: | chr29:23874524-23874196 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 96, 140 |
| Conread position: | 48-379 |
| Cow position: | chr29:35485310-35484984 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 185, 94 |
| Conread position: | 48-379 |
| Cow position: | chr29:38582032-38581709 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 185, 43 |
| Conread position: | 48-379 |
| Cow position: | chr29:41530914-41530590 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 97, 183 |
| Conread position: | 48-391 |
| Cow position: | chr29:22068676-22069021 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 91, 212 |
| Conread position: | 49-268 |
| Cow position: | chr29:29795319-29795543 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 124 |
| Conread position: | 49-379 |
| Cow position: | chr29:17607481-17607156 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 153 |
| Conread position: | 49-379 |
| Cow position: | chr29:20626630-20626317 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 184, 92 |
| Conread position: | 50-260 |
| Cow position: | chr29:35084160-35084370 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 63 |
| Conread position: | 50-375 |
| Cow position: | chr29:4367788-4367465 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 93, 224 |
| Conread position: | 50-379 |
| Cow position: | chr29:16657761-16657431 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 61, 225 |
| Conread position: | 52-350 |
| Cow position: | chr29:22585341-22585638 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 155, 103 |
| Conread position: | 54-379 |
| Cow position: | chr29:3704140-3704463 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 86, 131 |
| Conread position: | 55-303 |
| Cow position: | chr29:17301591-17301341 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 210 |
| Conread position: | 61-367 |
| Cow position: | chr29:19792225-19792528 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 167, 84 |
| Conread position: | 61-379 |
| Cow position: | chr29:11135845-11136148 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 64-206 |
| Cow position: | chr29:16011613-16011759 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 67-379 |
| Cow position: | chr29:10456517-10456812 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 68-269 |
| Cow position: | chr29:1124699-1124499 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 77-366 |
| Cow position: | chr29:3502606-3502309 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 78-259 |
| Cow position: | chr29:31594093-31594276 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 98-379 |
| Cow position: | chr29:43311778-43312055 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 100-379 |
| Cow position: | chr29:2623467-2623740 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 48, 42 |
Show alignments to all cow chromosomes.