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Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
2-379
               

               
Cow position:
               
chr4:15635341-15635709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 230
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr4:51903712-51903336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 236
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr4:33623820-33623436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr4:14542572-14542829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr4:19500993-19501243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-313
               

               
Cow position:
               
chr4:13344636-13344342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
140, 167
               

               
Conread position:
               
9-359
               

               
Cow position:
               
chr4:44449411-44449757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr4:19097385-19097026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr4:23509691-23509323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
10-279
               

               
Cow position:
               
chr4:69543279-69543009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
142, 130
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr4:29291611-29291275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 86
               

               
Conread position:
               
10-379
               

               
Cow position:
               
chr4:24001870-24002235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
14-289
               

               
Cow position:
               
chr4:63849-64118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
19-379
               

               
Cow position:
               
chr4:23600255-23599904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 111
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr4:52831935-52832148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
25-407
               

               
Cow position:
               
chr4:12903903-12903526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 232
               

               
Conread position:
               
28-375
               

               
Cow position:
               
chr4:19435334-19434999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
30-378
               

               
Cow position:
               
chr4:7421-7763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
30-379
               

               
Cow position:
               
chr4:12049323-12048979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 49
               

               
Conread position:
               
30-379
               

               
Cow position:
               
chr4:62771843-62772201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
32-243
               

               
Cow position:
               
chr4:48396721-48396930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr4:38935434-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 236
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr4:20139442-20139785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr4:31136830-31136489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
33-185
               

               
Cow position:
               
chr4:60719175-60719021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
33-202
               

               
Cow position:
               
chr4:51730023-51729857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
33-222
               

               
Cow position:
               
chr4:13026378-13026186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
109, 74
               

               
Conread position:
               
33-245
               

               
Cow position:
               
chr4:5913273-5913486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
33-265
               

               
Cow position:
               
chr4:59377983-59377756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
33-358
               

               
Cow position:
               
chr4:61897461-61897784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 119
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr4:12561114-12560787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 165
               

               
Conread position:
               
33-369
               

               
Cow position:
               
chr4:20986-20667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
199, 107
               

               
Conread position:
               
33-371
               

               
Cow position:
               
chr4:44782448-44782116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
33-374
               

               
Cow position:
               
chr4:56570880-56570544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 109
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr4:508835-509160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr4:961577-961925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
96, 240
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr4:23854254-23853942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
266, 98
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr4:620061-620418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 43
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr4:23846977-23847317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr4:45775264-45775607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 184
               

               
Conread position:
               
33-384
               

               
Cow position:
               
chr4:65650060-65650396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
201, 58
               

               
Conread position:
               
33-388
               

               
Cow position:
               
chr4:37935211-37935556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 109
               

               
Conread position:
               
33-401
               

               
Cow position:
               
chr4:56239786-56240131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 103
               

               
Conread position:
               
34-352
               

               
Cow position:
               
chr4:12127566-12127881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
190, 117
               

               
Conread position:
               
34-367
               

               
Cow position:
               
chr4:65815634-65815946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
34-375
               

               
Cow position:
               
chr4:31348113-31348456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 187
               

               
Conread position:
               
34-377
               

               
Cow position:
               
chr4:7571486-7571145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 199
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr4:19582545-19582882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 47
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr4:36731263-36730924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 94
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr4:41602922-41602527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
35-222
               

               
Cow position:
               
chr4:67466795-67466607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
35-294
               

               
Cow position:
               
chr4:11272022-11272277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
39-367
               

               
Cow position:
               
chr4:49089845-49089540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
313, 58
               

               
Conread position:
               
40-221
               

               
Cow position:
               
chr4:17084270-17084455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
40-387
               

               
Cow position:
               
chr4:68387860-68387516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 52
               

               
Conread position:
               
41-151
               

               
Cow position:
               
chr4:38209909-38210019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-172
               

               
Cow position:
               
chr4:17851187-17851318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-187
               

               
Cow position:
               
chr4:10851385-10851529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
41-187
               

               
Cow position:
               
chr4:19493621-19493472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
41-193
               

               
Cow position:
               
chr4:66136542-66136691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
41-196
               

               
Cow position:
               
chr4:19324040-19323884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 146
               

               
Conread position:
               
41-204
               

               
Cow position:
               
chr4:46566404-46566572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr4:19578453-19578277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
41-253
               

               
Cow position:
               
chr4:20027037-20027247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
41-256
               

               
Cow position:
               
chr4:48409203-48409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
41-266
               

               
Cow position:
               
chr4:41370875-41371099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 94
               

               
Conread position:
               
41-279
               

               
Cow position:
               
chr4:20147249-20147016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 111
               

               
Conread position:
               
41-290
               

               
Cow position:
               
chr4:3421688-3421447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
105, 136
               

               
Conread position:
               
41-313
               

               
Cow position:
               
chr4:38944192-38944464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
41-342
               

               
Cow position:
               
chr4:36290690-36290379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 95
               

               
Conread position:
               
41-348
               

               
Cow position:
               
chr4:13693606-13693912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 226
               

               
Conread position:
               
41-351
               

               
Cow position:
               
chr4:4319086-4319388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 112
               

               
Conread position:
               
41-355
               

               
Cow position:
               
chr4:26659366-26659064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr4:21531578-21531883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
41-357
               

               
Cow position:
               
chr4:65432216-65431902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 132
               

               
Conread position:
               
41-362
               

               
Cow position:
               
chr4:58880895-58881215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 226
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr4:41867502-41867183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr4:9815281-9815614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 225
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr4:17111808-17112139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 32
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr4:23526760-23526435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr4:25806965-25806637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 117
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr4:37691246-37691570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 188
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr4:38952619-38952297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 96
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr4:48961420-48961752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr4:54191155-54190838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr4:17832834-17833170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
5, 163
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr4:33612293-33612628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr4:34641660-34641994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 160
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr4:35982065-35981724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:11187517-11187191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
187, 99
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:11871856-11872178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 89
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:16799120-16799458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 231
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:19597258-19597579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:24744340-24744679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 225
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:34630964-34630636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 180
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:37915270-37915595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:40414562-40414897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 159
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:48486060-48485727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 130
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr4:51728145-51727817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 227
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr4:3850617-3850282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr4:45234807-45235131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
317, 105
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr4:65179083-65179402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
41-392
               

               
Cow position:
               
chr4:7704259-7704584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 146
               

               
Conread position:
               
42-313
               

               
Cow position:
               
chr4:11332162-11331890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 226
               

               
Conread position:
               
43-384
               

               
Cow position:
               
chr4:28772003-28772338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 131
               

               
Conread position:
               
43-392
               

               
Cow position:
               
chr4:3388608-3388273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
44-383
               

               
Cow position:
               
chr4:27540682-27540351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
45-295
               

               
Cow position:
               
chr4:4843182-4843433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
45-313
               

               
Cow position:
               
chr4:29106969-29106700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 216
               

               
Conread position:
               
45-322
               

               
Cow position:
               
chr4:31859326-31859053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 156
               

               
Conread position:
               
45-325
               

               
Cow position:
               
chr4:2885478-2885750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 205
               

               
Conread position:
               
45-355
               

               
Cow position:
               
chr4:28836598-28836285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
103, 144
               

               
Conread position:
               
45-360
               

               
Cow position:
               
chr4:13043325-13043024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
203, 106
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr4:570854-570534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
103, 135
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr4:2894093-2893758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
103, 183
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr4:9137341-9137011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr4:53100863-53100540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 158
               

               
Conread position:
               
45-380
               

               
Cow position:
               
chr4:42673238-42672904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 175
               

               
Conread position:
               
45-388
               

               
Cow position:
               
chr4:17052531-17052873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 229
               

               
Conread position:
               
46-146
               

               
Cow position:
               
chr4:61478666-61478566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-223
               

               
Cow position:
               
chr4:38157027-38157207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
46-227
               

               
Cow position:
               
chr4:52779911-52779732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
46-253
               

               
Cow position:
               
chr4:30169769-30169969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
46-257
               

               
Cow position:
               
chr4:68889500-68889707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 142
               

               
Conread position:
               
46-311
               

               
Cow position:
               
chr4:17774289-17774547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
93, 223
               

               
Conread position:
               
46-360
               

               
Cow position:
               
chr4:21232813-21233118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 81
               

               
Conread position:
               
46-371
               

               
Cow position:
               
chr4:47730919-47730604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 156
               

               
Conread position:
               
46-373
               

               
Cow position:
               
chr4:3283386-3283709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 154
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr4:7430381-7430057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr4:47348887-47348570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr4:63349424-63349737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
188, 93
               

               
Conread position:
               
46-377
               

               
Cow position:
               
chr4:27530179-27529849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 105
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:3687983-3687662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 120
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:4084389-4084712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 129
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:8947456-8947138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:12591153-12591477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:15623911-15623578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:21065097-21064773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:22101204-22101533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
310, 94
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:33433195-33433524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 227
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:34337211-34337528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:39231460-39231789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
99, 152
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:44613066-44612737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:45738414-45738748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 188
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr4:46550441-46550118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 136
               

               
Conread position:
               
46-380
               

               
Cow position:
               
chr4:19700156-19699832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 34
               

               
Conread position:
               
47-241
               

               
Cow position:
               
chr4:25537608-25537411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
47-344
               

               
Cow position:
               
chr4:13222127-13222406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
47-370
               

               
Cow position:
               
chr4:25984276-25983970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
301, 83
               

               
Conread position:
               
47-378
               

               
Cow position:
               
chr4:3341012-3340686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 217
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr4:10915776-10916103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr4:13590143-13589825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
187, 106
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr4:33395638-33395954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 131
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr4:33970837-33971163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 160
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr4:38999483-38999161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr4:42423745-42424067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 133
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr4:46591727-46591396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 99
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr4:51851266-51850929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 129
               

               
Conread position:
               
47-380
               

               
Cow position:
               
chr4:14153167-14152807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
48-253
               

               
Cow position:
               
chr4:54171685-54171476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 98
               

               
Conread position:
               
48-253
               

               
Cow position:
               
chr4:54927381-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
109, 150
               

               
Conread position:
               
48-269
               

               
Cow position:
               
chr4:33100751-33100979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
48-292
               

               
Cow position:
               
chr4:31505965-31506214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 225
               

               
Conread position:
               
48-300
               

               
Cow position:
               
chr4:65175086-65175329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
184, 94
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr4:21371450-21371140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 130
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr4:66256745-66256423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-377
               

               
Cow position:
               
chr4:62317504-62317174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr4:9444628-9444954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr4:203084-203414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 105
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr4:1015129-1014801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
67, 222
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr4:5460802-5461119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 153
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr4:7964589-7964917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr4:12030905-12030573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
185, 109
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr4:19008105-19007777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr4:21588552-21588867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
48-426
               

               
Cow position:
               
chr4:16966321-16966711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
48-427
               

               
Cow position:
               
chr4:59785381-59785006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 124
               

               
Conread position:
               
49-173
               

               
Cow position:
               
chr4:54541580-54541707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr4:23444988-23445313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 223
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr4:18095616-18095942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr4:48152317-48152635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr4:51899064-51898731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
50-375
               

               
Cow position:
               
chr4:44451573-44451268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr4:25197438-25197763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr4:47351860-47351541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
183, 96
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr4:66172739-66173064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
51-382
               

               
Cow position:
               
chr4:65919664-65919349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
53-379
               

               
Cow position:
               
chr4:44838838-44839151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 150
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr4:275514-275194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
54-359
               

               
Cow position:
               
chr4:44956129-44956435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 205
               

               
Conread position:
               
55-375
               

               
Cow position:
               
chr4:19142328-19142027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 83
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr4:19497217-19497516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 18
               

               
Conread position:
               
60-374
               

               
Cow position:
               
chr4:66112024-66112338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 207
               

               
Conread position:
               
69-346
               

               
Cow position:
               
chr4:19463534-19463258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 192
               

               
Conread position:
               
81-369
               

               
Cow position:
               
chr4:62920841-62921113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
272, 76
               

               
Conread position:
               
84-376
               

               
Cow position:
               
chr4:62983530-62983816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
89-257
               

               
Cow position:
               
chr4:47047913-47047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
91-384
               

               
Cow position:
               
chr4:19438481-19438187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 179
               

               
Conread position:
               
94-336
               

               
Cow position:
               
chr4:51083360-51083584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
100-379
               

               
Cow position:
               
chr4:22215646-22215921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
236-427
               

               
Cow position:
               
chr4:39458452-39458276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               
Show alignments to all cow chromosomes.