• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
2-373
               

               
Cow position:
               
chr5:5938462-5938097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr5:48829294-48828920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 154
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr5:41302938-41303321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr5:65601596-65601227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 109
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr5:8162679-8163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 172
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr5:11668050-11668407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
151, 132
               

               
Conread position:
               
8-202
               

               
Cow position:
               
chr5:26150290-26150483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr5:20422061-20422325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr5:44028175-44028480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
146, 68
               

               
Conread position:
               
8-331
               

               
Cow position:
               
chr5:61810903-61810608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr5:60183936-60183691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 153
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr5:56877613-56877362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
9-342
               

               
Cow position:
               
chr5:34562148-34561813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 261
               

               
Conread position:
               
9-364
               

               
Cow position:
               
chr5:62142807-62142452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 197
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr5:50821914-50821559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 257
               

               
Conread position:
               
9-377
               

               
Cow position:
               
chr5:56070990-56070622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 259
               

               
Conread position:
               
10-371
               

               
Cow position:
               
chr5:64175996-64176346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 146
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr5:68264830-68265163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 179
               

               
Conread position:
               
14-379
               

               
Cow position:
               
chr5:3281960-3281598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr5:73418165-73418382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
15-351
               

               
Cow position:
               
chr5:50943032-50943359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 108
               

               
Conread position:
               
25-346
               

               
Cow position:
               
chr5:23168711-23169018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 187
               

               
Conread position:
               
26-375
               

               
Cow position:
               
chr5:57074217-57074564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 156
               

               
Conread position:
               
27-371
               

               
Cow position:
               
chr5:5257175-5257522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 214
               

               
Conread position:
               
28-316
               

               
Cow position:
               
chr5:16214799-16214520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
30-374
               

               
Cow position:
               
chr5:23140477-23140801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
30-377
               

               
Cow position:
               
chr5:4506853-4507192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
32-185
               

               
Cow position:
               
chr5:56517212-56517057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
67, 45
               

               
Conread position:
               
32-204
               

               
Cow position:
               
chr5:59626863-59627038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
32-258
               

               
Cow position:
               
chr5:12434651-12434418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
96, 172
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr5:46512661-46512951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
32-374
               

               
Cow position:
               
chr5:21617566-21617227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 185
               

               
Conread position:
               
33-178
               

               
Cow position:
               
chr5:20288156-20288302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
33-246
               

               
Cow position:
               
chr5:41294187-41293974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chr5:54060383-54060110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 54
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr5:62639011-62638730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr5:37808556-37808848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 146
               

               
Conread position:
               
33-336
               

               
Cow position:
               
chr5:48009752-48010036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 90
               

               
Conread position:
               
33-346
               

               
Cow position:
               
chr5:57737206-57736915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
33-356
               

               
Cow position:
               
chr5:35969639-35969333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
33-370
               

               
Cow position:
               
chr5:72564871-72564538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 193
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr5:43737856-43738177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
33-375
               

               
Cow position:
               
chr5:67932365-67932690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr5:43992431-43992092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
107, 227
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr5:44752200-44752543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 149
               

               
Conread position:
               
33-425
               

               
Cow position:
               
chr5:64758660-64759051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 219
               

               
Conread position:
               
34-210
               

               
Cow position:
               
chr5:67212467-67212286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
35-409
               

               
Cow position:
               
chr5:30253847-30253482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 231
               

               
Conread position:
               
35-441
               

               
Cow position:
               
chr5:31640531-31640138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 127
               

               
Conread position:
               
39-230
               

               
Cow position:
               
chr5:43403006-43402810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
39-235
               

               
Cow position:
               
chr5:62378881-62378696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
39-379
               

               
Cow position:
               
chr5:26467729-26467387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 231
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr5:67118521-67118369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
41-151
               

               
Cow position:
               
chr5:9233890-9234002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
41-178
               

               
Cow position:
               
chr5:31052479-31052347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
41-178
               

               
Cow position:
               
chr5:61102815-61102676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
41-196
               

               
Cow position:
               
chr5:56338922-56339074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
41-204
               

               
Cow position:
               
chr5:63150070-63150231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
41-221
               

               
Cow position:
               
chr5:66551797-66551980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr5:17554932-17555113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr5:54375403-54375608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr5:42670765-42670968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr5:58446906-58446691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
41-253
               

               
Cow position:
               
chr5:27171894-27172093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
41-260
               

               
Cow position:
               
chr5:44726235-44726446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
41-260
               

               
Cow position:
               
chr5:64591996-64592212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 117
               

               
Conread position:
               
41-269
               

               
Cow position:
               
chr5:49474446-49474671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 169
               

               
Conread position:
               
41-284
               

               
Cow position:
               
chr5:64026920-64027149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
41-301
               

               
Cow position:
               
chr5:35247011-35247265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
41-313
               

               
Cow position:
               
chr5:30629057-30629324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
41-313
               

               
Cow position:
               
chr5:30949816-30950086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 140
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr5:6286334-6286604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
41-326
               

               
Cow position:
               
chr5:59631573-59631301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
188, 99
               

               
Conread position:
               
41-342
               

               
Cow position:
               
chr5:44446766-44447082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
41-350
               

               
Cow position:
               
chr5:57591787-57591486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr5:45804159-45803851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 165
               

               
Conread position:
               
41-367
               

               
Cow position:
               
chr5:15721975-15722275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr5:8820914-8821239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr5:29903424-29903749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 99
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr5:3582659-3582361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr5:19278607-19278920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr5:68718966-68718655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr5:14314627-14314293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 227
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr5:22242666-22243014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr5:28302644-28302969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 141
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr5:34050217-34049880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 120
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr5:43929637-43929963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
41-376
               

               
Cow position:
               
chr5:32696724-32697043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:6045395-6045053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 234
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:17086922-17087263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:24996124-24996457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:29828146-29827820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:34887096-34887431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:37814725-37814390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 181
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:41165187-41164855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 204
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:45845592-45845928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:46509766-46510101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 125
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:47601911-47601584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:52644981-52645311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
307, 101
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:57935009-57935347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 225
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:65941151-65941486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:66257735-66257409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:66366608-66366298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:69337919-69337599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 99
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr5:30276789-30276457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 90
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr5:65752959-65752621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 232
               

               
Conread position:
               
41-407
               

               
Cow position:
               
chr5:39447436-39447793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 156
               

               
Conread position:
               
41-417
               

               
Cow position:
               
chr5:4710053-4710415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
350, 40
               

               
Conread position:
               
43-183
               

               
Cow position:
               
chr5:69099817-69099675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
43-243
               

               
Cow position:
               
chr5:50575881-50575682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
111, 96
               

               
Conread position:
               
44-313
               

               
Cow position:
               
chr5:56014827-56014568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
105, 133
               

               
Conread position:
               
44-375
               

               
Cow position:
               
chr5:40109588-40109272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr5:1087104-1087288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
45-240
               

               
Cow position:
               
chr5:35126150-35125953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
45-273
               

               
Cow position:
               
chr5:14473309-14473549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
101, 225
               

               
Conread position:
               
45-296
               

               
Cow position:
               
chr5:19523995-19523742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
184, 218
               

               
Conread position:
               
45-313
               

               
Cow position:
               
chr5:30178409-30178677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 228
               

               
Conread position:
               
45-320
               

               
Cow position:
               
chr5:19335686-19335967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
104, 255
               

               
Conread position:
               
45-356
               

               
Cow position:
               
chr5:48154370-48154682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 112
               

               
Conread position:
               
45-357
               

               
Cow position:
               
chr5:6503786-6504090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 153
               

               
Conread position:
               
45-357
               

               
Cow position:
               
chr5:11427138-11427452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
45-372
               

               
Cow position:
               
chr5:55068801-55068490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
189, 160
               

               
Conread position:
               
45-375
               

               
Cow position:
               
chr5:32153224-32153545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr5:12149641-12149314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 161
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr5:47704031-47704367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr5:27179752-27179421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
183, 112
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr5:33080697-33081023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr5:33661941-33661621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
128, 95
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr5:54350266-54350594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
106, 97
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr5:61576640-61576306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
45-426
               

               
Cow position:
               
chr5:20128147-20127763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 97
               

               
Conread position:
               
46-211
               

               
Cow position:
               
chr5:69636318-69636164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
46-237
               

               
Cow position:
               
chr5:30233002-30232802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
46-247
               

               
Cow position:
               
chr5:56635989-56635793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
182, 81
               

               
Conread position:
               
46-306
               

               
Cow position:
               
chr5:42050646-42050388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
46-322
               

               
Cow position:
               
chr5:69520985-69520715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
46-327
               

               
Cow position:
               
chr5:14629716-14629996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 226
               

               
Conread position:
               
46-329
               

               
Cow position:
               
chr5:47323556-47323268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
204, 58
               

               
Conread position:
               
46-350
               

               
Cow position:
               
chr5:458582-458278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
46-356
               

               
Cow position:
               
chr5:71494915-71494607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
46-362
               

               
Cow position:
               
chr5:41545799-41546110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 94
               

               
Conread position:
               
46-368
               

               
Cow position:
               
chr5:56028447-56028752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
46-373
               

               
Cow position:
               
chr5:6528777-6528453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
46-377
               

               
Cow position:
               
chr5:72895780-72895461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 135
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr5:9894029-9894360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 115
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr5:64321848-64321515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 174
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr5:5110980-5111315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 198
               

               
Conread position:
               
47-178
               

               
Cow position:
               
chr5:35982644-35982779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
47-252
               

               
Cow position:
               
chr5:60016258-60016055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
47-312
               

               
Cow position:
               
chr5:55956001-55955740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 40
               

               
Conread position:
               
47-371
               

               
Cow position:
               
chr5:25495265-25495563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
150, 69
               

               
Conread position:
               
47-372
               

               
Cow position:
               
chr5:27102701-27103014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
47-380
               

               
Cow position:
               
chr5:32338872-32339209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
47-383
               

               
Cow position:
               
chr5:63647384-63647704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
186, 44
               

               
Conread position:
               
47-384
               

               
Cow position:
               
chr5:58793514-58793853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
48-207
               

               
Cow position:
               
chr5:37893426-37893266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 107
               

               
Conread position:
               
48-241
               

               
Cow position:
               
chr5:57767893-57768084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chr5:45273409-45273627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
176, 99
               

               
Conread position:
               
48-269
               

               
Cow position:
               
chr5:57419702-57419922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 59
               

               
Conread position:
               
48-289
               

               
Cow position:
               
chr5:65883680-65883922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
91, 216
               

               
Conread position:
               
48-291
               

               
Cow position:
               
chr5:57101690-57101923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
48-294
               

               
Cow position:
               
chr5:36255165-36255411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 162
               

               
Conread position:
               
48-312
               

               
Cow position:
               
chr5:74580881-74580627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 79
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr5:4221070-4220790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
48-342
               

               
Cow position:
               
chr5:7044613-7044905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 219
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr5:24349199-24348882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr5:34463486-34463814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 208
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr5:36868829-36868516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr5:62172504-62172189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 83
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr5:64137348-64137022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr5:6838987-6839311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr5:47316882-47317200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr5:12873843-12873511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr5:22738197-22737872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr5:26370775-26370474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
181, 82
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr5:42845501-42845833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr5:61726057-61725737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr5:64523771-64524113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
48-381
               

               
Cow position:
               
chr5:15426630-15426293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr5:11229582-11229912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 41
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr5:21525251-21524926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 50
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr5:29552107-29551757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr5:37646451-37646790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 196
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr5:55966788-55967121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 98
               

               
Conread position:
               
48-388
               

               
Cow position:
               
chr5:39094642-39094311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
48-471
               

               
Cow position:
               
chr5:69461428-69461027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
49-259
               

               
Cow position:
               
chr5:41713387-41713183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
49-259
               

               
Cow position:
               
chr5:49440780-49440991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
100, 140
               

               
Conread position:
               
49-297
               

               
Cow position:
               
chr5:72951935-72951684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 221
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr5:59082103-59082425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 148
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr5:56524265-56523936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 156
               

               
Conread position:
               
50-294
               

               
Cow position:
               
chr5:33560644-33560892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
178, 104
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr5:67540111-67540398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 111
               

               
Conread position:
               
51-374
               

               
Cow position:
               
chr5:21828957-21828636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 218
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr5:26094078-26094402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
53-374
               

               
Cow position:
               
chr5:15598148-15598462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 108
               

               
Conread position:
               
54-252
               

               
Cow position:
               
chr5:7698086-7697893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
55-373
               

               
Cow position:
               
chr5:31144702-31145005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
55-375
               

               
Cow position:
               
chr5:45170444-45170133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
174, 72
               

               
Conread position:
               
57-379
               

               
Cow position:
               
chr5:34638967-34638652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 208
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr5:991546-991332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
60-262
               

               
Cow position:
               
chr5:50799614-50799418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
62-376
               

               
Cow position:
               
chr5:27155095-27154792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
62-379
               

               
Cow position:
               
chr5:13691489-13691809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 72
               

               
Conread position:
               
65-322
               

               
Cow position:
               
chr5:45472357-45472090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
92, 214
               

               
Conread position:
               
68-426
               

               
Cow position:
               
chr5:6670121-6670472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
72-373
               

               
Cow position:
               
chr5:64823243-64823540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
77-288
               

               
Cow position:
               
chr5:70951817-70952021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr5:66339142-66338851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
93-379
               

               
Cow position:
               
chr5:34916178-34915909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
94-363
               

               
Cow position:
               
chr5:60126419-60126156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
98-375
               

               
Cow position:
               
chr5:27015722-27015462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
124-426
               

               
Cow position:
               
chr5:11834164-11834470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
168-426
               

               
Cow position:
               
chr5:72344165-72344429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
164, 68
               
Show alignments to all cow chromosomes.