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Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
2-303
               

               
Cow position:
               
chr7:9781568-9781871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 268
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr7:63378550-63378177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr7:6042122-6041786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr7:47513535-47513906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr7:63707167-63707508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
8-310
               

               
Cow position:
               
chr7:14524627-14524322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
260, 138
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr7:35300270-35300500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
60, 119
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr7:15559834-15559585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
147, 162
               

               
Conread position:
               
9-327
               

               
Cow position:
               
chr7:29479674-29479358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr7:20535019-20534689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 158
               

               
Conread position:
               
9-352
               

               
Cow position:
               
chr7:48715001-48714659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 258
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr7:10296-9939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
9-371
               

               
Cow position:
               
chr7:63946439-63946780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr7:27079774-27079421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr7:40406796-40406449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 112
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr7:23646758-23646386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 132
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr7:64364381-64364750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 183
               

               
Conread position:
               
9-385
               

               
Cow position:
               
chr7:57593577-57593219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
133, 193
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr7:40067807-40067428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr7:39451003-39451408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 171
               

               
Conread position:
               
11-357
               

               
Cow position:
               
chr7:59168410-59168084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
11-375
               

               
Cow position:
               
chr7:29510089-29509741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 143
               

               
Conread position:
               
14-379
               

               
Cow position:
               
chr7:59692215-59691856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 181
               

               
Conread position:
               
22-240
               

               
Cow position:
               
chr7:8102555-8102338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 14
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr7:24461079-24460893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
28-414
               

               
Cow position:
               
chr7:47698133-47697770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
30-373
               

               
Cow position:
               
chr7:8878008-8877668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
30-379
               

               
Cow position:
               
chr7:48359132-48358793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
30-379
               

               
Cow position:
               
chr7:53551812-53552162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
30-423
               

               
Cow position:
               
chr7:39170038-39169638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 245
               

               
Conread position:
               
32-149
               

               
Cow position:
               
chr7:26871867-26871984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
32-241
               

               
Cow position:
               
chr7:8658639-8658429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
119, 136
               

               
Conread position:
               
32-346
               

               
Cow position:
               
chr7:5723826-5723514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr7:32894124-32894470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 182
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr7:32915239-32914895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 228
               

               
Conread position:
               
33-192
               

               
Cow position:
               
chr7:29505238-29505077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
33-200
               

               
Cow position:
               
chr7:26263528-26263703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr7:2579114-2579389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
119, 104
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr7:44454157-44454469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
33-377
               

               
Cow position:
               
chr7:4129657-4130005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
112, 170
               

               
Conread position:
               
33-378
               

               
Cow position:
               
chr7:37142250-37142580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
195, 39
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr7:17816872-17816542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr7:25512001-25512337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
119, 95
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr7:28563267-28563599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
188, 106
               

               
Conread position:
               
34-346
               

               
Cow position:
               
chr7:43908328-43908025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 169
               

               
Conread position:
               
34-398
               

               
Cow position:
               
chr7:44049249-44049600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
35-292
               

               
Cow position:
               
chr7:38263795-38263536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
5, 55
               

               
Conread position:
               
35-328
               

               
Cow position:
               
chr7:8977702-8977987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr7:29279898-29280235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 64
               

               
Conread position:
               
36-375
               

               
Cow position:
               
chr7:40074804-40074481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 174
               

               
Conread position:
               
38-356
               

               
Cow position:
               
chr7:13963330-13963010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 240
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr7:35274962-35275288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
39-369
               

               
Cow position:
               
chr7:50065999-50066319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 132
               

               
Conread position:
               
39-379
               

               
Cow position:
               
chr7:39416027-39415688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 153
               

               
Conread position:
               
41-203
               

               
Cow position:
               
chr7:56886394-56886556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr7:60732523-60732715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr7:40308404-40308592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
41-264
               

               
Cow position:
               
chr7:42637086-42636873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
41-266
               

               
Cow position:
               
chr7:28544292-28544066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
41-267
               

               
Cow position:
               
chr7:5199436-5199661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr7:11854610-11854381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 166
               

               
Conread position:
               
41-292
               

               
Cow position:
               
chr7:23762090-23761822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
101, 243
               

               
Conread position:
               
41-325
               

               
Cow position:
               
chr7:21565449-21565712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
41-333
               

               
Cow position:
               
chr7:43894944-43894654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
41-341
               

               
Cow position:
               
chr7:3773151-3773448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
41-343
               

               
Cow position:
               
chr7:4863933-4864216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr7:48667529-48667234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
41-362
               

               
Cow position:
               
chr7:21008819-21009161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
41-364
               

               
Cow position:
               
chr7:28917206-28916885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 228
               

               
Conread position:
               
41-367
               

               
Cow position:
               
chr7:44986768-44986453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
41-372
               

               
Cow position:
               
chr7:6058243-6057920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 144
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr7:17713356-17713676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 225
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr7:24220783-24220461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
187, 101
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr7:38060311-38060644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 227
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr7:45927050-45927365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr7:49417721-49417371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 94
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr7:49751239-49750913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 24
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr7:53785863-53786169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr7:38082271-38081944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 222
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr7:45331653-45331333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr7:9136953-9136626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 228
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr7:23936226-23935903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 81
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr7:40263542-40263866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 51
               

               
Conread position:
               
41-376
               

               
Cow position:
               
chr7:63749361-63749693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 133
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr7:23456706-23457032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 190
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr7:40567186-40566858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr7:43711331-43711004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr7:54712536-54712200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr7:58301824-58302161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 117
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:3256230-3256560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 232
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:10943445-10943769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:25496839-25496524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:30276850-30276516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 123
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:31094232-31094561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 196
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:33393424-33393096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 137
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:34422156-34422478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 40
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:36278413-36278078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:36996477-36996161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 95
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:37361991-37361667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 16
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:39150065-39149720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 233
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:48243787-48243462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr7:53382310-53381977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr7:1262144-1261801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr7:30931862-30932198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
41-387
               

               
Cow position:
               
chr7:46856848-46857181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
41-414
               

               
Cow position:
               
chr7:22793459-22793092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 87
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr7:26737231-26737617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 99
               

               
Conread position:
               
43-358
               

               
Cow position:
               
chr7:50860121-50859814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr7:40425201-40425426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 85
               

               
Conread position:
               
45-299
               

               
Cow position:
               
chr7:21166131-21166387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 225
               

               
Conread position:
               
45-312
               

               
Cow position:
               
chr7:14482177-14481908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
45-337
               

               
Cow position:
               
chr7:39145634-39145926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 173
               

               
Conread position:
               
45-346
               

               
Cow position:
               
chr7:3304688-3304381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 167
               

               
Conread position:
               
45-363
               

               
Cow position:
               
chr7:43882192-43881877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
184, 218
               

               
Conread position:
               
45-372
               

               
Cow position:
               
chr7:53097702-53097389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
111, 213
               

               
Conread position:
               
45-374
               

               
Cow position:
               
chr7:37569160-37568818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
84, 235
               

               
Conread position:
               
45-375
               

               
Cow position:
               
chr7:57162250-57161936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
45-377
               

               
Cow position:
               
chr7:40510754-40510420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
45-377
               

               
Cow position:
               
chr7:47547520-47547180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 285
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr7:39155225-39154892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
102, 225
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr7:14005992-14005654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 226
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr7:19466139-19466478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
122, 98
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr7:34428687-34428344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr7:39167574-39167248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
93, 143
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr7:39939847-39939522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
184, 97
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr7:40008940-40008601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
45-383
               

               
Cow position:
               
chr7:14076171-14076491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
308, 94
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr7:14519930-14520259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
45-387
               

               
Cow position:
               
chr7:64228781-64229120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
103, 226
               

               
Conread position:
               
46-211
               

               
Cow position:
               
chr7:29122010-29121847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 28
               

               
Conread position:
               
46-237
               

               
Cow position:
               
chr7:60870051-60869867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
146, 30
               

               
Conread position:
               
46-249
               

               
Cow position:
               
chr7:39472406-39472610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
46-283
               

               
Cow position:
               
chr7:49903883-49903652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 115
               

               
Conread position:
               
46-288
               

               
Cow position:
               
chr7:18188119-18188350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 45
               

               
Conread position:
               
46-314
               

               
Cow position:
               
chr7:9800463-9800204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
46-326
               

               
Cow position:
               
chr7:46818384-46818660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 137
               

               
Conread position:
               
46-365
               

               
Cow position:
               
chr7:11011572-11011895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
92, 126
               

               
Conread position:
               
46-373
               

               
Cow position:
               
chr7:31315419-31315110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
311, 105
               

               
Conread position:
               
46-373
               

               
Cow position:
               
chr7:53806713-53807027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr7:36534134-36533816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr7:44596592-44596902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr7:50095497-50095168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr7:9660940-9661255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
187, 67
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:20519-20184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
94, 222
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:8868937-8868602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:9193127-9193460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 160
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:14632475-14632160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 90
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:17967016-17967335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:18544271-18544592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:23568626-23568957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:26485683-26485364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:26631702-26632028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:36665435-36665113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 76
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr7:62733290-62732969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
46-388
               

               
Cow position:
               
chr7:57537413-57537750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
77, 110
               

               
Conread position:
               
47-264
               

               
Cow position:
               
chr7:13228470-13228683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 129
               

               
Conread position:
               
47-280
               

               
Cow position:
               
chr7:51644760-51644540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
47-289
               

               
Cow position:
               
chr7:5212367-5212608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 220
               

               
Conread position:
               
47-331
               

               
Cow position:
               
chr7:33990062-33989793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
47-356
               

               
Cow position:
               
chr7:34084144-34084443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
177, 39
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr7:33386031-33385717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
48-230
               

               
Cow position:
               
chr7:428674-428857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
48-231
               

               
Cow position:
               
chr7:18288162-18288342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr7:914152-913923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
164, 109
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr7:38025932-38025701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
185, 109
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr7:58923506-58923276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
180, 219
               

               
Conread position:
               
48-296
               

               
Cow position:
               
chr7:55085764-55085519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
185, 109
               

               
Conread position:
               
48-323
               

               
Cow position:
               
chr7:31503955-31503690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
185, 93
               

               
Conread position:
               
48-327
               

               
Cow position:
               
chr7:39099909-39100180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
176, 92
               

               
Conread position:
               
48-338
               

               
Cow position:
               
chr7:20219732-20220014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
48-344
               

               
Cow position:
               
chr7:25195650-25195354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
179, 119
               

               
Conread position:
               
48-358
               

               
Cow position:
               
chr7:64135359-64135659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
180, 85
               

               
Conread position:
               
48-361
               

               
Cow position:
               
chr7:40121580-40121267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 203
               

               
Conread position:
               
48-367
               

               
Cow position:
               
chr7:33279889-33280194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
300, 62
               

               
Conread position:
               
48-373
               

               
Cow position:
               
chr7:41293638-41293958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 153
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr7:4582620-4582948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
91, 99
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr7:16022403-16022089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
305, 161
               

               
Conread position:
               
48-377
               

               
Cow position:
               
chr7:8777316-8776984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 223
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr7:1320791-1321108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr7:25415502-25415180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr7:47931688-47932011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr7:6706408-6706080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
100, 216
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr7:22623994-22624322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr7:23663992-23664314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 69
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr7:37455426-37455105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
100, 94
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr7:50772624-50772948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 93
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr7:51019886-51019579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
108, 129
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr7:57258915-57259247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 196
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr7:58867740-58867393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
48-380
               

               
Cow position:
               
chr7:25263476-25263149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
181, 68
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr7:51442065-51442394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
49-307
               

               
Cow position:
               
chr7:42593171-42593417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
101, 195
               

               
Conread position:
               
49-357
               

               
Cow position:
               
chr7:14174319-14174602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
49-357
               

               
Cow position:
               
chr7:25960573-25960278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
49-373
               

               
Cow position:
               
chr7:53697800-53698126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 220
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr7:53053296-53053619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 163
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr7:2923755-2923425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 218
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr7:18388292-18388615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
179, 94
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr7:45593146-45592823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
50-378
               

               
Cow position:
               
chr7:57911717-57911392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
50-389
               

               
Cow position:
               
chr7:56820476-56820798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 72
               

               
Conread position:
               
50-436
               

               
Cow position:
               
chr7:10759607-10759994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
52-374
               

               
Cow position:
               
chr7:14541965-14542263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr7:40405949-40405635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
181, 108
               

               
Conread position:
               
54-266
               

               
Cow position:
               
chr7:13133598-13133800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr7:31170848-31171162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 201
               

               
Conread position:
               
58-375
               

               
Cow position:
               
chr7:23205531-23205846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
59-373
               

               
Cow position:
               
chr7:41872003-41872302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 80
               

               
Conread position:
               
64-375
               

               
Cow position:
               
chr7:39904189-39903891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 126
               

               
Conread position:
               
64-426
               

               
Cow position:
               
chr7:39988500-39988139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 206
               

               
Conread position:
               
65-379
               

               
Cow position:
               
chr7:30307834-30307529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
77-375
               

               
Cow position:
               
chr7:56838427-56838710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr7:51910208-51909912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr7:28584325-28584032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
81-333
               

               
Cow position:
               
chr7:31497798-31497548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
84-379
               

               
Cow position:
               
chr7:32819891-32819595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
98-392
               

               
Cow position:
               
chr7:26771929-26771654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 134
               

               
Conread position:
               
99-374
               

               
Cow position:
               
chr7:5914255-5913991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 40
               
Show alignments to all cow chromosomes.