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Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
1-358
               

               
Cow position:
               
chr8:47750378-47750721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr8:20150433-20150741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr8:9316026-9315669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr8:15479301-15479676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr8:24129251-24128870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr8:1253085-1252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr8:9705721-9705364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 172
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr8:40579297-40579509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
134, 152
               

               
Conread position:
               
9-181
               

               
Cow position:
               
chr8:5437881-5437705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
9-199
               

               
Cow position:
               
chr8:32130348-32130162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr8:4648770-4649041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr8:58058859-58058588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chr8:2931585-2931870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 145
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr8:59766711-59766365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr8:13661140-13660786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 136
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr8:18207027-18207395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 64
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr8:33974673-33974326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr8:43167912-43168272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 134
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr8:38861586-38861948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 126
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr8:20091422-20091136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
222, 31
               

               
Conread position:
               
13-376
               

               
Cow position:
               
chr8:38356746-38357095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
14-337
               

               
Cow position:
               
chr8:45071805-45072122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
14-375
               

               
Cow position:
               
chr8:35456732-35457087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
17-379
               

               
Cow position:
               
chr8:61567271-61567615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 73
               

               
Conread position:
               
23-256
               

               
Cow position:
               
chr8:31985368-31985136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
24-379
               

               
Cow position:
               
chr8:11606427-11606086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 109
               

               
Conread position:
               
26-366
               

               
Cow position:
               
chr8:20033820-20034146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
28-379
               

               
Cow position:
               
chr8:10400395-10400059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
30-221
               

               
Cow position:
               
chr8:4203757-4203950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
30-358
               

               
Cow position:
               
chr8:34288018-34287700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
30-379
               

               
Cow position:
               
chr8:31776288-31775935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
30-385
               

               
Cow position:
               
chr8:47328438-47328089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
32-172
               

               
Cow position:
               
chr8:37559225-37559083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
32-340
               

               
Cow position:
               
chr8:16031486-16031780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr8:4924660-4924315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 55
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chr8:17167662-17167471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
111, 147
               

               
Conread position:
               
33-278
               

               
Cow position:
               
chr8:53633131-53633381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 234
               

               
Conread position:
               
33-280
               

               
Cow position:
               
chr8:11783077-11782826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 200
               

               
Conread position:
               
33-313
               

               
Cow position:
               
chr8:19979988-19980261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 169
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr8:26304299-26304600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
185, 104
               

               
Conread position:
               
33-335
               

               
Cow position:
               
chr8:4500584-4500286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 230
               

               
Conread position:
               
33-356
               

               
Cow position:
               
chr8:669473-669790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
136, 108
               

               
Conread position:
               
33-365
               

               
Cow position:
               
chr8:20684064-20683738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 227
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr8:1394323-1393988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 165
               

               
Conread position:
               
33-378
               

               
Cow position:
               
chr8:3015573-3015224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 240
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr8:9130836-9131175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr8:18057838-18057495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 102
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr8:45127611-45127962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 106
               

               
Conread position:
               
34-275
               

               
Cow position:
               
chr8:38711684-38711451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr8:19011704-19011956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
122, 108
               

               
Conread position:
               
34-312
               

               
Cow position:
               
chr8:5894035-5893763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
34-356
               

               
Cow position:
               
chr8:35504142-35504460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
114, 38
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr8:3339170-3338842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr8:10263074-10263411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 176
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr8:10970925-10970579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 128
               

               
Conread position:
               
34-387
               

               
Cow position:
               
chr8:26625960-26625616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr8:50709145-50708799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 233
               

               
Conread position:
               
36-379
               

               
Cow position:
               
chr8:35971938-35971597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
39-277
               

               
Cow position:
               
chr8:55885059-55884823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
106, 116
               

               
Conread position:
               
39-287
               

               
Cow position:
               
chr8:55897728-55897964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
109, 137
               

               
Conread position:
               
39-317
               

               
Cow position:
               
chr8:6951612-6951342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 162
               

               
Conread position:
               
39-372
               

               
Cow position:
               
chr8:43857977-43858293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
315, 105
               

               
Conread position:
               
39-375
               

               
Cow position:
               
chr8:21220239-21219906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
99, 133
               

               
Conread position:
               
40-379
               

               
Cow position:
               
chr8:53451583-53451264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
147, 99
               

               
Conread position:
               
41-141
               

               
Cow position:
               
chr8:3914675-3914575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-184
               

               
Cow position:
               
chr8:37672119-37671984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
41-198
               

               
Cow position:
               
chr8:20320573-20320419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
41-208
               

               
Cow position:
               
chr8:15857057-15856887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
41-213
               

               
Cow position:
               
chr8:26284771-26284943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr8:27955067-27955258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
41-237
               

               
Cow position:
               
chr8:6224353-6224547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
41-237
               

               
Cow position:
               
chr8:44449520-44449709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr8:43228057-43227856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr8:20073096-20073310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
41-253
               

               
Cow position:
               
chr8:33640449-33640235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
106, 211
               

               
Conread position:
               
41-281
               

               
Cow position:
               
chr8:8577913-8577684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
41-283
               

               
Cow position:
               
chr8:39807683-39807437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
108, 148
               

               
Conread position:
               
41-302
               

               
Cow position:
               
chr8:37635910-37636161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr8:57041746-57042003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
41-313
               

               
Cow position:
               
chr8:12214091-12213830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
41-323
               

               
Cow position:
               
chr8:28987783-28987513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 140
               

               
Conread position:
               
41-327
               

               
Cow position:
               
chr8:39174158-39174445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 225
               

               
Conread position:
               
41-337
               

               
Cow position:
               
chr8:6484847-6485141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 230
               

               
Conread position:
               
41-347
               

               
Cow position:
               
chr8:57406845-57406550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr8:5980026-5979719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
41-364
               

               
Cow position:
               
chr8:59131321-59131633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 99
               

               
Conread position:
               
41-368
               

               
Cow position:
               
chr8:29624885-29625201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
41-370
               

               
Cow position:
               
chr8:53230106-53229795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr8:2897532-2897861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 214
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr8:32620899-32621239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 233
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr8:2774870-2774541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 118
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr8:23179461-23179790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr8:28294763-28295089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 116
               

               
Conread position:
               
41-376
               

               
Cow position:
               
chr8:37571620-37571952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 99
               

               
Conread position:
               
41-377
               

               
Cow position:
               
chr8:32988825-32988499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 89
               

               
Conread position:
               
41-378
               

               
Cow position:
               
chr8:16938384-16938697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 90
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr8:8986861-8987185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 134
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr8:10336954-10337276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 139
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr8:19642552-19642222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 98
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr8:32133353-32133004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 135
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr8:36249334-36249666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr8:42794238-42794558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr8:48775903-48775567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 90
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr8:58520378-58520054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 228
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr8:38894096-38893754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 163
               

               
Conread position:
               
41-387
               

               
Cow position:
               
chr8:54052392-54052049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
41-388
               

               
Cow position:
               
chr8:36375432-36375769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 134
               

               
Conread position:
               
43-273
               

               
Cow position:
               
chr8:37334254-37334022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 128
               

               
Conread position:
               
44-214
               

               
Cow position:
               
chr8:16957703-16957541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
44-266
               

               
Cow position:
               
chr8:35563416-35563190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 177
               

               
Conread position:
               
44-379
               

               
Cow position:
               
chr8:38573143-38573470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 117
               

               
Conread position:
               
45-243
               

               
Cow position:
               
chr8:36768555-36768355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr8:29149785-29150013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
45-287
               

               
Cow position:
               
chr8:37292010-37292250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
220, 97
               

               
Conread position:
               
45-312
               

               
Cow position:
               
chr8:21222708-21222452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
183, 92
               

               
Conread position:
               
45-330
               

               
Cow position:
               
chr8:8189984-8190267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 212
               

               
Conread position:
               
45-354
               

               
Cow position:
               
chr8:15694392-15694702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
45-356
               

               
Cow position:
               
chr8:59043018-59043326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
85, 115
               

               
Conread position:
               
45-362
               

               
Cow position:
               
chr8:24498323-24498017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
45-367
               

               
Cow position:
               
chr8:14947216-14947541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
179, 226
               

               
Conread position:
               
45-375
               

               
Cow position:
               
chr8:47664826-47665151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
45-376
               

               
Cow position:
               
chr8:41627036-41627366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 219
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr8:17199352-17199682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 164
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr8:43687634-43687293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 229
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr8:47342817-47342487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr8:537833-538163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
104, 126
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr8:12795904-12795567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr8:15394781-15395103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr8:47751834-47752167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 111
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr8:38572189-38572533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
45-387
               

               
Cow position:
               
chr8:10942666-10942993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
185, 46
               

               
Conread position:
               
45-424
               

               
Cow position:
               
chr8:30419123-30418746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 87
               

               
Conread position:
               
46-184
               

               
Cow position:
               
chr8:6248798-6248936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
46-206
               

               
Cow position:
               
chr8:18728865-18728704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
46-210
               

               
Cow position:
               
chr8:45126156-45126325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 156
               

               
Conread position:
               
46-236
               

               
Cow position:
               
chr8:13723488-13723298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-241
               

               
Cow position:
               
chr8:54147745-54147548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
46-259
               

               
Cow position:
               
chr8:25388217-25388008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
46-260
               

               
Cow position:
               
chr8:37391281-37391492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
46-267
               

               
Cow position:
               
chr8:29026558-29026778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
177, 113
               

               
Conread position:
               
46-294
               

               
Cow position:
               
chr8:6073737-6073984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
46-312
               

               
Cow position:
               
chr8:3922637-3922911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
182, 96
               

               
Conread position:
               
46-313
               

               
Cow position:
               
chr8:61128618-61128887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
46-320
               

               
Cow position:
               
chr8:28313643-28313913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
46-343
               

               
Cow position:
               
chr8:24328776-24329058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
46-346
               

               
Cow position:
               
chr8:6531492-6531203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 93
               

               
Conread position:
               
46-356
               

               
Cow position:
               
chr8:11278026-11278339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
103, 225
               

               
Conread position:
               
46-356
               

               
Cow position:
               
chr8:21382612-21382919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
46-356
               

               
Cow position:
               
chr8:35991129-35990822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 76
               

               
Conread position:
               
46-358
               

               
Cow position:
               
chr8:53214246-53214550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr8:10456546-10456227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
108, 221
               

               
Conread position:
               
46-375
               

               
Cow position:
               
chr8:46235774-46235456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
46-377
               

               
Cow position:
               
chr8:35580556-35580875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 135
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr8:47170023-47169708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 156
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr8:16653496-16653158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 157
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr8:16972446-16972778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr8:17103348-17103667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr8:24867663-24867994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 154
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr8:33406768-33407085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 153
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr8:48512934-48513255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
226, 96
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr8:30324402-30324074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 186
               

               
Conread position:
               
46-389
               

               
Cow position:
               
chr8:26386137-26386471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
46-391
               

               
Cow position:
               
chr8:53362778-53363110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
46-426
               

               
Cow position:
               
chr8:23018434-23018815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
47-190
               

               
Cow position:
               
chr8:55247513-55247657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 8
               

               
Conread position:
               
47-211
               

               
Cow position:
               
chr8:1183139-1182977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
47-219
               

               
Cow position:
               
chr8:41219406-41219235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 136
               

               
Conread position:
               
47-223
               

               
Cow position:
               
chr8:55871617-55871800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
47-234
               

               
Cow position:
               
chr8:14383116-14383298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
47-243
               

               
Cow position:
               
chr8:834495-834292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
47-356
               

               
Cow position:
               
chr8:5224967-5225261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
47-363
               

               
Cow position:
               
chr8:18557310-18557631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
47-371
               

               
Cow position:
               
chr8:32854745-32855044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
47-375
               

               
Cow position:
               
chr8:48527888-48528196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
47-378
               

               
Cow position:
               
chr8:2904338-2904661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
47-379
               

               
Cow position:
               
chr8:52925643-52925966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
48-253
               

               
Cow position:
               
chr8:40143775-40143982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 194
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chr8:37192441-37192228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
48-279
               

               
Cow position:
               
chr8:9907194-9906959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
48-281
               

               
Cow position:
               
chr8:48482735-48482967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 115
               

               
Conread position:
               
48-304
               

               
Cow position:
               
chr8:45777710-45777963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
48-346
               

               
Cow position:
               
chr8:1620649-1620938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
48-370
               

               
Cow position:
               
chr8:20107714-20108022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 79
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr8:24371639-24371961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr8:55360641-55360321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr8:59642418-59642744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
82, 167
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:1187998-1187688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 178
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:1999706-1999376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
94, 217
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:5177262-5176936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 93
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:16144207-16143878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:17179957-17180274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
180, 91
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:18049671-18049355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
181, 89
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:21206957-21206635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:21222269-21221955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 89
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:28322047-28321727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:37298554-37298231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:53429852-53429525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr8:60126926-60126586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
176, 91
               

               
Conread position:
               
48-470
               

               
Cow position:
               
chr8:20926554-20926991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 233
               

               
Conread position:
               
49-342
               

               
Cow position:
               
chr8:39592664-39592376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
108, 93
               

               
Conread position:
               
49-378
               

               
Cow position:
               
chr8:53383480-53383158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 85
               

               
Conread position:
               
49-379
               

               
Cow position:
               
chr8:61537767-61538092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
50-259
               

               
Cow position:
               
chr8:19546864-19546651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
50-259
               

               
Cow position:
               
chr8:45447021-45447236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
50-266
               

               
Cow position:
               
chr8:935780-935566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
174, 90
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr8:40888126-40888437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr8:18017593-18017273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
183, 206
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr8:9942450-9942773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr8:10297662-10297991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 103
               

               
Conread position:
               
51-266
               

               
Cow position:
               
chr8:37582025-37582230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
51-350
               

               
Cow position:
               
chr8:54303098-54302818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
52-316
               

               
Cow position:
               
chr8:21083218-21083480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
156, 91
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr8:20157690-20158001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 174
               

               
Conread position:
               
56-377
               

               
Cow position:
               
chr8:25579606-25579295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
57-392
               

               
Cow position:
               
chr8:35583490-35583820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
114, 146
               

               
Conread position:
               
60-375
               

               
Cow position:
               
chr8:29030020-29030340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 219
               

               
Conread position:
               
63-220
               

               
Cow position:
               
chr8:12814947-12814789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
77-340
               

               
Cow position:
               
chr8:59438232-59438492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr8:6724289-6724589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
154-426
               

               
Cow position:
               
chr8:28262949-28263213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
226, 55
               
Show alignments to all cow chromosomes.