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Cow genome map

           
Conread name:
           
Utr2-C0001805_L19
        

               
Conread position:
               
2-336
               

               
Cow position:
               
chr9:32815568-32815882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
44, 140
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr9:13994081-13994476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
6-256
               

               
Cow position:
               
chr9:39011548-39011306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
133, 146
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr9:9406132-9405767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 180
               

               
Conread position:
               
8-172
               

               
Cow position:
               
chr9:9686489-9686327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
139, 89
               

               
Conread position:
               
8-195
               

               
Cow position:
               
chr9:28754740-28754929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr9:11304152-11303945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
8-384
               

               
Cow position:
               
chr9:21888093-21888462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 89
               

               
Conread position:
               
9-194
               

               
Cow position:
               
chr9:32982151-32981963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 135
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr9:54493059-54493254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 189
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chr9:33584761-33584562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
131, 107
               

               
Conread position:
               
9-371
               

               
Cow position:
               
chr9:55287965-55287611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 63
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr9:5245777-5246136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 195
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr9:5509647-5510012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
9-379
               

               
Cow position:
               
chr9:34958132-34957764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 185
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr9:13670558-13670924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 94
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr9:20681480-20681119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
127, 13
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr9:64105825-64106150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
12-249
               

               
Cow position:
               
chr9:52267827-52267592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr9:47500283-47500001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
13-387
               

               
Cow position:
               
chr9:13182129-13181760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr9:25556902-25557139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
129, 166
               

               
Conread position:
               
15-375
               

               
Cow position:
               
chr9:26345038-26344701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
24-358
               

               
Cow position:
               
chr9:8723734-8724061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
28-313
               

               
Cow position:
               
chr9:53762637-53762922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 131
               

               
Conread position:
               
30-423
               

               
Cow position:
               
chr9:25964890-25964489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
12, 246
               

               
Conread position:
               
32-305
               

               
Cow position:
               
chr9:4341212-4340953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
32-375
               

               
Cow position:
               
chr9:11299733-11299413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 44
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr9:45285588-45285243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 172
               

               
Conread position:
               
33-177
               

               
Cow position:
               
chr9:37199075-37199215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
33-237
               

               
Cow position:
               
chr9:43936893-43937091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
33-264
               

               
Cow position:
               
chr9:49293195-49292970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
33-283
               

               
Cow position:
               
chr9:11168678-11168928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
195, 109
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr9:4646377-4646058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
105, 118
               

               
Conread position:
               
33-372
               

               
Cow position:
               
chr9:5757040-5756722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
33-372
               

               
Cow position:
               
chr9:9443653-9443317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
33-377
               

               
Cow position:
               
chr9:17310614-17310276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr9:6879727-6880058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr9:56032367-56032041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
33-383
               

               
Cow position:
               
chr9:64155903-64155564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
33-401
               

               
Cow position:
               
chr9:16300621-16300264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 161
               

               
Conread position:
               
34-356
               

               
Cow position:
               
chr9:33597935-33598245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 105
               

               
Conread position:
               
34-373
               

               
Cow position:
               
chr9:9461708-9461373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr9:42446034-42445697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 230
               

               
Conread position:
               
35-235
               

               
Cow position:
               
chr9:7952850-7953049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 157
               

               
Conread position:
               
39-323
               

               
Cow position:
               
chr9:40303185-40302894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
41-133
               

               
Cow position:
               
chr9:55354567-55354659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-199
               

               
Cow position:
               
chr9:23956024-23955870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
41-202
               

               
Cow position:
               
chr9:41785166-41785337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
41-220
               

               
Cow position:
               
chr9:53751001-53750823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 145
               

               
Conread position:
               
41-253
               

               
Cow position:
               
chr9:5263456-5263668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
41-281
               

               
Cow position:
               
chr9:41728216-41728452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
41-282
               

               
Cow position:
               
chr9:21080519-21080754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
41-285
               

               
Cow position:
               
chr9:12910445-12910202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
41-298
               

               
Cow position:
               
chr9:19493510-19493253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 227
               

               
Conread position:
               
41-302
               

               
Cow position:
               
chr9:49416943-49417197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
187, 101
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr9:17799581-17799850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 217
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr9:44834007-44833745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
89, 115
               

               
Conread position:
               
41-313
               

               
Cow position:
               
chr9:48627984-48628251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 141
               

               
Conread position:
               
41-325
               

               
Cow position:
               
chr9:4268026-4267747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
41-334
               

               
Cow position:
               
chr9:3186082-3186385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
41-336
               

               
Cow position:
               
chr9:49709803-49710088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
192, 35
               

               
Conread position:
               
41-337
               

               
Cow position:
               
chr9:8562778-8563086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
41-341
               

               
Cow position:
               
chr9:33119932-33119633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 226
               

               
Conread position:
               
41-343
               

               
Cow position:
               
chr9:50139241-50139532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
41-346
               

               
Cow position:
               
chr9:25921779-25922077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 205
               

               
Conread position:
               
41-352
               

               
Cow position:
               
chr9:63905651-63905344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
188, 99
               

               
Conread position:
               
41-354
               

               
Cow position:
               
chr9:18217143-18216838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr9:43207419-43207115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
5, 90
               

               
Conread position:
               
41-358
               

               
Cow position:
               
chr9:9595996-9595686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
41-362
               

               
Cow position:
               
chr9:34374968-34374659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
41-364
               

               
Cow position:
               
chr9:31079124-31078812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr9:24887162-24887477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
41-373
               

               
Cow position:
               
chr9:56453294-56453615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 56
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr9:62399918-62400238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr9:5763675-5763346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr9:28726768-28726442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 227
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr9:41679703-41680018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
41-375
               

               
Cow position:
               
chr9:51204683-51205005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:5219216-5218892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 199
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:5500809-5501137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:9552046-9552375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 176
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:23431191-23430858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:26279213-26278889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:33940561-33940895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:35904789-35904463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 98
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:43870931-43871260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 228
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:45141644-45141330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:46316825-46316500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 14
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:48107160-48106831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
192, 102
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:52578582-52578245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 161
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr9:64091636-64091976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 228
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr9:20091002-20091331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr9:55256596-55256257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
41-388
               

               
Cow position:
               
chr9:34286755-34287087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 191
               

               
Conread position:
               
41-392
               

               
Cow position:
               
chr9:15215731-15215380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 223
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr9:13169707-13169339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 110
               

               
Conread position:
               
43-181
               

               
Cow position:
               
chr9:17840720-17840579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
44-375
               

               
Cow position:
               
chr9:17872151-17871824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 216
               

               
Conread position:
               
45-252
               

               
Cow position:
               
chr9:1756185-1755975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 94
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr9:8901267-8901043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
108, 135
               

               
Conread position:
               
45-317
               

               
Cow position:
               
chr9:26440852-26440571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 244
               

               
Conread position:
               
45-322
               

               
Cow position:
               
chr9:1916247-1916517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
188, 112
               

               
Conread position:
               
45-322
               

               
Cow position:
               
chr9:6338753-6339032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
95, 225
               

               
Conread position:
               
45-364
               

               
Cow position:
               
chr9:53258094-53257787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
45-373
               

               
Cow position:
               
chr9:41282975-41283310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
178, 94
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr9:647737-648062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
110, 95
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr9:12428540-12428215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr9:15805963-15805633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 95
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr9:21030268-21030604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 113
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr9:22318309-22318626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 164
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr9:45756323-45756645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 150
               

               
Conread position:
               
45-379
               

               
Cow position:
               
chr9:52505346-52505015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
45-383
               

               
Cow position:
               
chr9:53413278-53412957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
201, 52
               

               
Conread position:
               
45-417
               

               
Cow position:
               
chr9:6397824-6397462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
46-222
               

               
Cow position:
               
chr9:1867412-1867586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
46-266
               

               
Cow position:
               
chr9:43875758-43875541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 175
               

               
Conread position:
               
46-311
               

               
Cow position:
               
chr9:11313549-11313288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
188, 94
               

               
Conread position:
               
46-366
               

               
Cow position:
               
chr9:8534729-8534407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
100, 141
               

               
Conread position:
               
46-367
               

               
Cow position:
               
chr9:14796809-14796503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr9:8636628-8636945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 176
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr9:28747559-28747234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 96
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr9:29006518-29006848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 206
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr9:34689636-34689324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
46-379
               

               
Cow position:
               
chr9:59386808-59386493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
202, 126
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr9:19714041-19714363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 93
               

               
Conread position:
               
47-273
               

               
Cow position:
               
chr9:60027159-60027386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
47-300
               

               
Cow position:
               
chr9:62668210-62668464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
47-302
               

               
Cow position:
               
chr9:61302962-61303217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 114
               

               
Conread position:
               
47-375
               

               
Cow position:
               
chr9:59013377-59013051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
47-389
               

               
Cow position:
               
chr9:35167138-35167464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 93
               

               
Conread position:
               
48-221
               

               
Cow position:
               
chr9:33411608-33411440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
166, 74
               

               
Conread position:
               
48-248
               

               
Cow position:
               
chr9:16121131-16121331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 111
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr9:52638204-52637945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr9:52130973-52131263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
48-340
               

               
Cow position:
               
chr9:56088105-56087821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 105
               

               
Conread position:
               
48-369
               

               
Cow position:
               
chr9:9573286-9573610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 226
               

               
Conread position:
               
48-369
               

               
Cow position:
               
chr9:32676640-32676963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 94
               

               
Conread position:
               
48-372
               

               
Cow position:
               
chr9:10010773-10011081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
186, 88
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr9:18342696-18343006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr9:20942653-20942328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr9:29191310-29191624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 97
               

               
Conread position:
               
48-375
               

               
Cow position:
               
chr9:32238344-32238667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr9:1649983-1650313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr9:8998312-8998643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
91, 226
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr9:17634860-17634543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 65
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr9:26403748-26404077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 107
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr9:49321336-49321650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
48-379
               

               
Cow position:
               
chr9:52407127-52407458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 178
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr9:55321600-55321938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
48-392
               

               
Cow position:
               
chr9:35849867-35850199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
48-425
               

               
Cow position:
               
chr9:54681472-54681846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 56
               

               
Conread position:
               
48-426
               

               
Cow position:
               
chr9:5327221-5327591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
49-318
               

               
Cow position:
               
chr9:1938094-1938352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
49-337
               

               
Cow position:
               
chr9:43757501-43757768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
49-359
               

               
Cow position:
               
chr9:63194571-63194875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
184, 93
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr9:7634235-7634552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 216
               

               
Conread position:
               
50-256
               

               
Cow position:
               
chr9:26477181-26477387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr9:25804797-25805034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 136
               

               
Conread position:
               
50-313
               

               
Cow position:
               
chr9:27279274-27279539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
50-335
               

               
Cow position:
               
chr9:6839958-6840254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 229
               

               
Conread position:
               
50-362
               

               
Cow position:
               
chr9:22638067-22638370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr9:22443662-22443329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
50-375
               

               
Cow position:
               
chr9:34468613-34468309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
303, 90
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr9:38792981-38793307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 93
               

               
Conread position:
               
52-333
               

               
Cow position:
               
chr9:56011466-56011738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
176, 90
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr9:5433599-5433919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 206
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr9:17411226-17410901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 167
               

               
Conread position:
               
52-426
               

               
Cow position:
               
chr9:4192477-4192094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
54-371
               

               
Cow position:
               
chr9:36490930-36490615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 218
               

               
Conread position:
               
55-378
               

               
Cow position:
               
chr9:5441959-5442276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
56-470
               

               
Cow position:
               
chr9:36827106-36827527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 118
               

               
Conread position:
               
59-379
               

               
Cow position:
               
chr9:20847903-20848224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 198
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr9:13205594-13205290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
60-376
               

               
Cow position:
               
chr9:9403198-9402900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 13
               

               
Conread position:
               
64-379
               

               
Cow position:
               
chr9:22360989-22361302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
75-373
               

               
Cow position:
               
chr9:14853460-14853172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr9:9516775-9516483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
98-237
               

               
Cow position:
               
chr9:42509129-42509266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
154-426
               

               
Cow position:
               
chr9:52001073-52001342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 120
               
Show alignments to all cow chromosomes.