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Cow genome map

           
Conread name:
           
Utr2-C0001807_I07
        

               
Conread position:
               
1-269
               

               
Cow position:
               
chr16:56787982-56787712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr16:26649838-26649445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 329
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr16:42752657-42752951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
3-135
               

               
Cow position:
               
chr16:33235337-33235202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr16:902089-901940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr16:26500958-26501121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr16:30939531-30939699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr16:24143139-24142970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr16:29399792-29399970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr16:33751996-33752169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr16:16543870-16544047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr16:39385199-39385414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 204
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr16:47098199-47098000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr16:4503078-4503306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr16:24228552-24228318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr16:4144862-4145101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr16:22868377-22868136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr16:24672563-24672294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr16:594431-594159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr16:675291-675555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 135
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr16:37380069-37380335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr16:13233147-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr16:13752325-13752062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr16:16548409-16548683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr16:39646353-39646615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr16:27013700-27013975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr16:35937134-35937415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr16:32327450-32327737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr16:52789859-52790147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr16:5636390-5636690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr16:43275820-43276124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr16:23871853-23871540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr16:11105347-11105665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 305
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr16:37062597-37062284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr16:39394374-39394682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr16:24825868-24826188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr16:5896217-5896534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr16:4626597-4626274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr16:8812290-8811979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 183
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr16:13969581-13969250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr16:39616541-39616839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr16:8026047-8025737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr16:9973704-9973381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr16:22919295-22919585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
166, 31
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr16:42340003-42340314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr16:50688319-50688639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr16:51869436-51869757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 163
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr16:53830791-53830474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 228
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr16:48191203-48190894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr16:48494758-48494435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr16:22842255-22841934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr16:3633913-3634241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
168, 36
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr16:12633691-12634012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:4059157-4059483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:12361174-12360846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:15960497-15960162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:18678995-18679315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:30037197-30036864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
27, 230
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:33507861-33508186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
30, 131
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:35623447-35623121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
27, 181
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr16:40562025-40562359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 311
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr16:13611652-13611326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr16:19408714-19408399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
136, 35
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr16:4192621-4192304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr16:10032426-10032769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr16:43801111-43800784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr16:52636584-52636255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr16:24702650-24702984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr16:35188052-35188385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr16:600743-601100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr16:20634080-20633726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr16:54679465-54679819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr16:33482236-33482607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr16:11615430-11615080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 30
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr16:48006693-48006331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr16:53509192-53508823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr16:26610431-26610823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 143
               

               
Conread position:
               
3-386
               

               
Cow position:
               
chr16:3614546-3614919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr16:13307068-13306687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr16:23730141-23729734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr16:25170188-25170577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr16:28191865-28192235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr16:49126386-49126006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr16:26676892-26676504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr16:27701443-27701077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr16:45677054-45676689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:4910733-4910336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:8193243-8193642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:8840690-8841083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:14568687-14568305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:29380052-29380443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:31117822-31117432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:33645812-33646201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr16:51598805-51598427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr16:10040040-10039655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr16:33704597-33704991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr16:46552616-46552982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
337, 30
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:820049-820441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:14360902-14361286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:15504728-15504342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 168
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:30290114-30290501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 165
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:35343678-35343282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:39695679-39695290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:45731577-45731215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr16:47820369-47820764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:17745633-17746035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:37116872-37117267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:38905428-38905033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:43308771-43308374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 219
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:45047826-45047464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:47662511-47662917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:53813861-53813458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:55683091-55683489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr16:56082562-56082171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:238059-238458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 202
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:8069020-8068624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:8323188-8322804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 295
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:9932958-9933352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:14754524-14754136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:16597360-16597751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:17142730-17143130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 177
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:29766141-29766512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:39474340-39473966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 20
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:41752775-41752389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:42079044-42078656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:42092578-42092186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 29
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:42443950-42444352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 184
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:42777761-42778137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:45813903-45813506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:47518648-47519024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:48398448-48398065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:48956595-48956991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:51578622-51578257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:52169864-52170245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr16:54578965-54579357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:10148079-10148460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:14106445-14106837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:32781160-32781565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 245
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:38709029-38708643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr16:50417889-50417518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr16:24147953-24148193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
26, 186
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr16:8933621-8933310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr16:19003721-19003401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr16:31122451-31122104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr16:4972226-4971832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr16:18205770-18206144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr16:35195812-35195420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr16:15824643-15824249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr16:40333526-40333143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr16:45677774-45678169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 108
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr16:14028820-14028628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr16:31978388-31978121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr16:8315377-8315088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr16:8367024-8366723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr16:48385602-48385289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr16:48370148-48369823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 102
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr16:18354152-18353832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr16:48340892-48340567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr16:45456756-45457091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr16:49169584-49169248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr16:37452818-37452464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr16:9729004-9729380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr16:8066081-8065695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr16:51710328-51709959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
164, 28
               

               
Conread position:
               
5-395
               

               
Cow position:
               
chr16:38663912-38663517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 140
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr16:4857290-4856907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr16:23563937-23564330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr16:29655125-29655506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 178
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr16:39165045-39165425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr16:48095964-48095577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr16:52275330-52274943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr16:54598061-54598241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
167, 27
               

               
Conread position:
               
6-270
               

               
Cow position:
               
chr16:32587000-32587269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr16:47643220-47643501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr16:39172364-39172020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:4981577-4981312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chr16:10352671-10352981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
9-396
               

               
Cow position:
               
chr16:13689468-13689855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
9-396
               

               
Cow position:
               
chr16:24855344-24855726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
10-217
               

               
Cow position:
               
chr16:16177622-16177830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr16:16424800-16424572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
10-281
               

               
Cow position:
               
chr16:7077939-7077667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
10-310
               

               
Cow position:
               
chr16:12060217-12060521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 185
               

               
Conread position:
               
10-323
               

               
Cow position:
               
chr16:53086521-53086223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
10-333
               

               
Cow position:
               
chr16:20025248-20025568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 169
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr16:48087067-48086720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr16:42242315-42241961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 48
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr16:22850132-22850514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
10-395
               

               
Cow position:
               
chr16:7429182-7429573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr16:935641-935265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr16:11422115-11422507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr16:49336031-49336412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr16:56231628-56232004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
11-279
               

               
Cow position:
               
chr16:11008147-11008419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr16:29557824-29557438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 182
               

               
Conread position:
               
13-281
               

               
Cow position:
               
chr16:54083842-54084112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
13-396
               

               
Cow position:
               
chr16:46433515-46433132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr16:47620189-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
14-219
               

               
Cow position:
               
chr16:4103349-4103148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr16:44973304-44973509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr16:43804306-43804515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
14-243
               

               
Cow position:
               
chr16:35168534-35168768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
14-264
               

               
Cow position:
               
chr16:11568304-11568064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr16:46628027-46627762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
14-318
               

               
Cow position:
               
chr16:11790822-11791123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 142
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr16:6344630-6344328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr16:22808742-22808445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
14-319
               

               
Cow position:
               
chr16:37669921-37669623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr16:30715301-30715621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr16:15808780-15809097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
14-332
               

               
Cow position:
               
chr16:5256805-5257123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
14-333
               

               
Cow position:
               
chr16:43105704-43105387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
14-337
               

               
Cow position:
               
chr16:17626739-17627061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
14-357
               

               
Cow position:
               
chr16:7702340-7702677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
14-390
               

               
Cow position:
               
chr16:14124965-14125307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
14-390
               

               
Cow position:
               
chr16:20205261-20205650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
14-395
               

               
Cow position:
               
chr16:3821342-3821721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 156
               

               
Conread position:
               
14-395
               

               
Cow position:
               
chr16:14242185-14242559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 19
               

               
Conread position:
               
14-395
               

               
Cow position:
               
chr16:16552371-16552757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr16:425006-424617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr16:7136543-7136154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr16:13989792-13990158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr16:19643702-19644078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
14-397
               

               
Cow position:
               
chr16:11957775-11957385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
14-397
               

               
Cow position:
               
chr16:18758035-18757642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
15-201
               

               
Cow position:
               
chr16:7082923-7082732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
15-206
               

               
Cow position:
               
chr16:9790821-9790630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
15-220
               

               
Cow position:
               
chr16:39417307-39417105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
15-271
               

               
Cow position:
               
chr16:47385252-47384998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
15-311
               

               
Cow position:
               
chr16:11103015-11102715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
82, 283
               

               
Conread position:
               
15-393
               

               
Cow position:
               
chr16:1549068-1548692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
15-394
               

               
Cow position:
               
chr16:14685579-14685201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
15-394
               

               
Cow position:
               
chr16:49125714-49125331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
15-395
               

               
Cow position:
               
chr16:20476346-20476724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
15-395
               

               
Cow position:
               
chr16:22772778-22773164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
15-395
               

               
Cow position:
               
chr16:25839425-25839802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
15-396
               

               
Cow position:
               
chr16:52835071-52834709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr16:42345795-42345500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
16-334
               

               
Cow position:
               
chr16:29608329-29608638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr16:11806483-11806813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
16-395
               

               
Cow position:
               
chr16:15370490-15370874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
16-396
               

               
Cow position:
               
chr16:45554249-45554626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
16-397
               

               
Cow position:
               
chr16:54287687-54288060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
163, 12
               

               
Conread position:
               
17-243
               

               
Cow position:
               
chr16:53037812-53037595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
17-395
               

               
Cow position:
               
chr16:7665446-7665831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 365
               

               
Conread position:
               
17-396
               

               
Cow position:
               
chr16:23681184-23681553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
18-319
               

               
Cow position:
               
chr16:17288754-17289061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
18-393
               

               
Cow position:
               
chr16:51500749-51501117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
29-381
               

               
Cow position:
               
chr16:56522650-56522296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr16:36203784-36203502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
32-333
               

               
Cow position:
               
chr16:5836408-5836711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
32-397
               

               
Cow position:
               
chr16:31079270-31078910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
33-323
               

               
Cow position:
               
chr16:52133688-52133400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 151
               

               
Conread position:
               
33-327
               

               
Cow position:
               
chr16:4902416-4902709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
33-396
               

               
Cow position:
               
chr16:41590601-41590963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
34-171
               

               
Cow position:
               
chr16:25287859-25287721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
34-255
               

               
Cow position:
               
chr16:49404323-49404109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
34-267
               

               
Cow position:
               
chr16:1725256-1725012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr16:53048383-53048617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
34-275
               

               
Cow position:
               
chr16:8279957-8279722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
150, 32
               

               
Conread position:
               
34-281
               

               
Cow position:
               
chr16:42970099-42969850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
34-292
               

               
Cow position:
               
chr16:39514247-39513989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 104
               

               
Conread position:
               
34-303
               

               
Cow position:
               
chr16:689540-689801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
140, 18
               

               
Conread position:
               
34-311
               

               
Cow position:
               
chr16:38119617-38119344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
34-312
               

               
Cow position:
               
chr16:27659905-27659639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
34-313
               

               
Cow position:
               
chr16:41697259-41696984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
34-314
               

               
Cow position:
               
chr16:5725297-5725575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
140, 14
               

               
Conread position:
               
34-316
               

               
Cow position:
               
chr16:53627600-53627317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
34-332
               

               
Cow position:
               
chr16:31348939-31348639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 227
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr16:5741070-5741376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 113
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr16:45785571-45785865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr16:56875821-56875536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr16:7498891-7499183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr16:14758561-14758866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr16:10592263-10592566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 149
               

               
Conread position:
               
34-338
               

               
Cow position:
               
chr16:42633925-42633611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
34-339
               

               
Cow position:
               
chr16:16265271-16264974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
34-365
               

               
Cow position:
               
chr16:45609819-45610149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
34-385
               

               
Cow position:
               
chr16:21450679-21451031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr16:2223575-2223210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr16:33753261-33753624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
34-394
               

               
Cow position:
               
chr16:5654340-5654691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
34-394
               

               
Cow position:
               
chr16:46752444-46752080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr16:591984-591613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr16:7418212-7418564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr16:7442274-7441909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 213
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr16:9497450-9497069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 272
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr16:29158960-29159304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr16:32302164-32301811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr16:46655113-46655473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr16:50906299-50906669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 139
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr16:3303862-3304228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr16:7582544-7582908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr16:23472574-23472934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 147
               

               
Conread position:
               
35-264
               

               
Cow position:
               
chr16:39237776-39238005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
35-269
               

               
Cow position:
               
chr16:22124124-22123906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
35-269
               

               
Cow position:
               
chr16:24023466-24023233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
35-292
               

               
Cow position:
               
chr16:53891952-53891700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
104, 144
               

               
Conread position:
               
35-333
               

               
Cow position:
               
chr16:5363725-5364029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
35-333
               

               
Cow position:
               
chr16:17282496-17282786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
35-334
               

               
Cow position:
               
chr16:7456631-7456336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 151
               

               
Conread position:
               
35-337
               

               
Cow position:
               
chr16:7549797-7550096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 85
               

               
Conread position:
               
35-387
               

               
Cow position:
               
chr16:56590340-56590690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
35-390
               

               
Cow position:
               
chr16:53553884-53553530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
35-395
               

               
Cow position:
               
chr16:8494168-8493798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 181
               

               
Conread position:
               
35-395
               

               
Cow position:
               
chr16:22984574-22984941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
54, 160
               

               
Conread position:
               
35-395
               

               
Cow position:
               
chr16:29037736-29038108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr16:3047512-3047150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 122
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr16:4275912-4275550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 122
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr16:50873335-50872997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 143
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr16:21369314-21369553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
36-283
               

               
Cow position:
               
chr16:50521308-50521556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
103, 147
               

               
Conread position:
               
36-324
               

               
Cow position:
               
chr16:20069658-20069951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
36-337
               

               
Cow position:
               
chr16:54734067-54734368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
36-395
               

               
Cow position:
               
chr16:44744308-44743939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
45, 265
               

               
Conread position:
               
36-396
               

               
Cow position:
               
chr16:9985556-9985210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 88
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr16:38191303-38191537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
37-275
               

               
Cow position:
               
chr16:9136007-9136238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
37-385
               

               
Cow position:
               
chr16:45139503-45139845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
39-269
               

               
Cow position:
               
chr16:10651057-10650824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
40-261
               

               
Cow position:
               
chr16:47245418-47245645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
40-305
               

               
Cow position:
               
chr16:23738013-23738281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
43-323
               

               
Cow position:
               
chr16:4699141-4698872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-395
               

               
Cow position:
               
chr16:8522558-8522200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 198
               

               
Conread position:
               
44-318
               

               
Cow position:
               
chr16:18402526-18402800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
44-319
               

               
Cow position:
               
chr16:27723054-27723338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
44-330
               

               
Cow position:
               
chr16:35296911-35297202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
44-335
               

               
Cow position:
               
chr16:25380658-25380363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
44-390
               

               
Cow position:
               
chr16:25386819-25387155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
44-395
               

               
Cow position:
               
chr16:42734175-42733830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
46-315
               

               
Cow position:
               
chr16:22804752-22804488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
46-319
               

               
Cow position:
               
chr16:41689537-41689807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
46-334
               

               
Cow position:
               
chr16:47854783-47855067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
46-337
               

               
Cow position:
               
chr16:17945362-17945655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
46-396
               

               
Cow position:
               
chr16:23033698-23034021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
46-397
               

               
Cow position:
               
chr16:22380515-22380169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
47-393
               

               
Cow position:
               
chr16:38243821-38243471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 151
               

               
Conread position:
               
47-395
               

               
Cow position:
               
chr16:12273909-12274261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 215
               

               
Conread position:
               
48-323
               

               
Cow position:
               
chr16:51246790-51247052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
48-366
               

               
Cow position:
               
chr16:3246364-3246044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
48-367
               

               
Cow position:
               
chr16:33226696-33226375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 207
               

               
Conread position:
               
48-396
               

               
Cow position:
               
chr16:8240023-8239672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
125, 95
               

               
Conread position:
               
49-396
               

               
Cow position:
               
chr16:33198591-33198241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
49-397
               

               
Cow position:
               
chr16:12320065-12320416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 91
               

               
Conread position:
               
50-388
               

               
Cow position:
               
chr16:7504932-7505263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 217
               

               
Conread position:
               
51-328
               

               
Cow position:
               
chr16:48493024-48493301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 266
               

               
Conread position:
               
51-333
               

               
Cow position:
               
chr16:6319043-6319331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
51-366
               

               
Cow position:
               
chr16:50288994-50289313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
51-390
               

               
Cow position:
               
chr16:10504681-10505000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
51-396
               

               
Cow position:
               
chr16:32970233-32969890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 180
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr16:10772978-10773239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr16:21762124-21761852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
52-389
               

               
Cow position:
               
chr16:48146810-48146469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
199, 23
               

               
Conread position:
               
53-395
               

               
Cow position:
               
chr16:42399052-42398698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
54-379
               

               
Cow position:
               
chr16:47964967-47964646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 110
               

               
Conread position:
               
55-242
               

               
Cow position:
               
chr16:4372645-4372456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
60-395
               

               
Cow position:
               
chr16:7583251-7583589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
61-333
               

               
Cow position:
               
chr16:54341843-54342114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 103
               

               
Conread position:
               
64-323
               

               
Cow position:
               
chr16:56565454-56565714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
64-356
               

               
Cow position:
               
chr16:8448786-8448500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
64-397
               

               
Cow position:
               
chr16:33596077-33595755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
66-334
               

               
Cow position:
               
chr16:5415903-5415634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
66-390
               

               
Cow position:
               
chr16:54225646-54225331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
68-397
               

               
Cow position:
               
chr16:29095802-29096110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
293, 25
               

               
Conread position:
               
69-166
               

               
Cow position:
               
chr16:33986716-33986618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
69-211
               

               
Cow position:
               
chr16:49173931-49174072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
69-367
               

               
Cow position:
               
chr16:41578089-41578389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
69-395
               

               
Cow position:
               
chr16:19047575-19047242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 231
               

               
Conread position:
               
69-396
               

               
Cow position:
               
chr16:9904956-9905288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
69-396
               

               
Cow position:
               
chr16:50282562-50282243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
70-390
               

               
Cow position:
               
chr16:54710169-54709867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
69, 105
               

               
Conread position:
               
71-393
               

               
Cow position:
               
chr16:44210700-44210371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
72-270
               

               
Cow position:
               
chr16:18036817-18037014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr16:36121113-36120874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
73-334
               

               
Cow position:
               
chr16:33267583-33267845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
74-219
               

               
Cow position:
               
chr16:26068800-26068946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 110
               

               
Conread position:
               
74-281
               

               
Cow position:
               
chr16:30369221-30369423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
74-299
               

               
Cow position:
               
chr16:45645817-45645595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
74-389
               

               
Cow position:
               
chr16:39683240-39682914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
75-279
               

               
Cow position:
               
chr16:45753581-45753383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
75-396
               

               
Cow position:
               
chr16:51696949-51697267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
76-396
               

               
Cow position:
               
chr16:8737935-8738259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
79-396
               

               
Cow position:
               
chr16:23955960-23955639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
80-396
               

               
Cow position:
               
chr16:11082883-11083188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
81-313
               

               
Cow position:
               
chr16:39402123-39401908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
81-397
               

               
Cow position:
               
chr16:45700608-45700287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
83-322
               

               
Cow position:
               
chr16:53089463-53089241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
84-395
               

               
Cow position:
               
chr16:5907229-5907550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
85-393
               

               
Cow position:
               
chr16:55233574-55233867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
85-396
               

               
Cow position:
               
chr16:8462200-8461890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr16:34754079-34753767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 290
               

               
Conread position:
               
88-323
               

               
Cow position:
               
chr16:22206958-22207195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
88-337
               

               
Cow position:
               
chr16:56796784-56796534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
89-323
               

               
Cow position:
               
chr16:54226715-54226482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
50, 158
               

               
Conread position:
               
89-332
               

               
Cow position:
               
chr16:17903766-17903518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
89-337
               

               
Cow position:
               
chr16:18052214-18052462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
97-324
               

               
Cow position:
               
chr16:11939933-11940156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
97-395
               

               
Cow position:
               
chr16:19052527-19052824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
97-396
               

               
Cow position:
               
chr16:45121930-45122234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
98-323
               

               
Cow position:
               
chr16:13578969-13578743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
43, 197
               

               
Conread position:
               
98-332
               

               
Cow position:
               
chr16:21317703-21317466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
98-337
               

               
Cow position:
               
chr16:43674767-43675006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
98-338
               

               
Cow position:
               
chr16:10945538-10945308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
98-396
               

               
Cow position:
               
chr16:47852700-47852406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
99-330
               

               
Cow position:
               
chr16:29677737-29677511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
99-396
               

               
Cow position:
               
chr16:40514587-40514301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
102-311
               

               
Cow position:
               
chr16:50667182-50667397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
102-394
               

               
Cow position:
               
chr16:4852220-4851925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
103-333
               

               
Cow position:
               
chr16:3114434-3114667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
103-392
               

               
Cow position:
               
chr16:2417692-2417398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 193
               

               
Conread position:
               
103-396
               

               
Cow position:
               
chr16:11660549-11660278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
104-312
               

               
Cow position:
               
chr16:21039926-21040134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
109-390
               

               
Cow position:
               
chr16:4970787-4971072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 188
               

               
Conread position:
               
110-311
               

               
Cow position:
               
chr16:27160961-27160758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
110-333
               

               
Cow position:
               
chr16:33054579-33054353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
110-338
               

               
Cow position:
               
chr16:32807388-32807162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
110-396
               

               
Cow position:
               
chr16:30036139-30036427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr16:48545728-48545954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 176
               

               
Conread position:
               
113-396
               

               
Cow position:
               
chr16:19670440-19670166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
115-322
               

               
Cow position:
               
chr16:34220093-34220303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
115-396
               

               
Cow position:
               
chr16:56358358-56358092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
117-356
               

               
Cow position:
               
chr16:12468056-12467815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
117-388
               

               
Cow position:
               
chr16:16570826-16571084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 125
               

               
Conread position:
               
119-330
               

               
Cow position:
               
chr16:30359147-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr16:29527739-29527950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
120-388
               

               
Cow position:
               
chr16:21381647-21381388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
120-396
               

               
Cow position:
               
chr16:17135145-17134869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
120-397
               

               
Cow position:
               
chr16:33134856-33135120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
121-313
               

               
Cow position:
               
chr16:7980707-7980897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
124-255
               

               
Cow position:
               
chr16:35477498-35477365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
124-321
               

               
Cow position:
               
chr16:16933037-16933235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
124-326
               

               
Cow position:
               
chr16:42240968-42241171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
124-337
               

               
Cow position:
               
chr16:53792900-53792687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
124-393
               

               
Cow position:
               
chr16:44428798-44429066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 168
               

               
Conread position:
               
126-334
               

               
Cow position:
               
chr16:40700808-40700608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
127-309
               

               
Cow position:
               
chr16:50370517-50370698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
127-390
               

               
Cow position:
               
chr16:30305893-30305631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
127-395
               

               
Cow position:
               
chr16:8017889-8018148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
128-313
               

               
Cow position:
               
chr16:38091302-38091115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
129-394
               

               
Cow position:
               
chr16:9552984-9553239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
132-397
               

               
Cow position:
               
chr16:44239330-44239619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
133-395
               

               
Cow position:
               
chr16:38244698-38244427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
134-396
               

               
Cow position:
               
chr16:31149318-31149567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
138-332
               

               
Cow position:
               
chr16:17135661-17135851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
138-390
               

               
Cow position:
               
chr16:11135049-11134799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
138-396
               

               
Cow position:
               
chr16:20824417-20824669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 18
               

               
Conread position:
               
138-396
               

               
Cow position:
               
chr16:42977396-42977666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 174
               

               
Conread position:
               
138-397
               

               
Cow position:
               
chr16:31561685-31561947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
139-396
               

               
Cow position:
               
chr16:37401187-37401431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
142-396
               

               
Cow position:
               
chr16:11584460-11584215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
142-396
               

               
Cow position:
               
chr16:45294480-45294737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 214
               

               
Conread position:
               
143-396
               

               
Cow position:
               
chr16:31880824-31880560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
171, 72
               

               
Conread position:
               
145-394
               

               
Cow position:
               
chr16:21370240-21370000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
170, 25
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr16:7626109-7626346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
154-393
               

               
Cow position:
               
chr16:49860185-49860423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr16:15953871-15953691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
157-396
               

               
Cow position:
               
chr16:20921107-20921344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
158-393
               

               
Cow position:
               
chr16:12010047-12010287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
159-393
               

               
Cow position:
               
chr16:15407600-15407367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
160-381
               

               
Cow position:
               
chr16:56243930-56243711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
163-324
               

               
Cow position:
               
chr16:12133818-12133981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
169-396
               

               
Cow position:
               
chr16:17460131-17460369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
169-397
               

               
Cow position:
               
chr16:15905286-15905051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
144, 210
               

               
Conread position:
               
170-324
               

               
Cow position:
               
chr16:33235195-33235043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
172-323
               

               
Cow position:
               
chr16:27728225-27728378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr16:48613507-48613294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
173-397
               

               
Cow position:
               
chr16:16025405-16025637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
175-396
               

               
Cow position:
               
chr16:53451675-53451897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 152
               

               
Conread position:
               
177-395
               

               
Cow position:
               
chr16:40029912-40029694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 163
               

               
Conread position:
               
177-396
               

               
Cow position:
               
chr16:35297378-35297594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
179-393
               

               
Cow position:
               
chr16:56626912-56627120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
180-396
               

               
Cow position:
               
chr16:12324430-12324646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-333
               

               
Cow position:
               
chr16:24591828-24591981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
181-396
               

               
Cow position:
               
chr16:15945280-15945060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
182-338
               

               
Cow position:
               
chr16:11390309-11390154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
182-393
               

               
Cow position:
               
chr16:7723678-7723888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
182-395
               

               
Cow position:
               
chr16:18048178-18047961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
182-395
               

               
Cow position:
               
chr16:50442525-50442743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 106
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr16:1582949-1582737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
131, 188
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr16:11359128-11359339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr16:32893605-32893811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr16:42433134-42432925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
183-333
               

               
Cow position:
               
chr16:17292044-17291893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
184-310
               

               
Cow position:
               
chr16:19815268-19815141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
184-390
               

               
Cow position:
               
chr16:9958808-9959015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
184-396
               

               
Cow position:
               
chr16:9578512-9578301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
184, 85
               

               
Conread position:
               
186-397
               

               
Cow position:
               
chr16:7546845-7546643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
190-315
               

               
Cow position:
               
chr16:40540321-40540442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
191-390
               

               
Cow position:
               
chr16:9596356-9596553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
192-396
               

               
Cow position:
               
chr16:18573066-18572863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 5
               

               
Conread position:
               
192-396
               

               
Cow position:
               
chr16:24142971-24142760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 53
               

               
Conread position:
               
195-319
               

               
Cow position:
               
chr16:31046690-31046566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-389
               

               
Cow position:
               
chr16:50286503-50286698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 29
               

               
Conread position:
               
195-394
               

               
Cow position:
               
chr16:31484672-31484476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
195-395
               

               
Cow position:
               
chr16:7812680-7812884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 99
               

               
Conread position:
               
195-396
               

               
Cow position:
               
chr16:14376772-14376973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
120, 50
               

               
Conread position:
               
199-390
               

               
Cow position:
               
chr16:34205070-34204879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
204-395
               

               
Cow position:
               
chr16:7928386-7928191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
206-393
               

               
Cow position:
               
chr16:8810092-8809908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
208-385
               

               
Cow position:
               
chr16:39385494-39385670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
209-313
               

               
Cow position:
               
chr16:41807098-41806994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
209-338
               

               
Cow position:
               
chr16:20265559-20265432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
209-396
               

               
Cow position:
               
chr16:19478761-19478576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 161
               

               
Conread position:
               
211-393
               

               
Cow position:
               
chr16:15714115-15714301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
212-396
               

               
Cow position:
               
chr16:7912136-7912319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
216-395
               

               
Cow position:
               
chr16:33290395-33290578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
217-395
               

               
Cow position:
               
chr16:10249807-10249625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
219-395
               

               
Cow position:
               
chr16:15252038-15251869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
219-397
               

               
Cow position:
               
chr16:16178046-16178218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
230-396
               

               
Cow position:
               
chr16:51143824-51143991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
235-396
               

               
Cow position:
               
chr16:49734115-49733953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 6
               

               
Conread position:
               
236-394
               

               
Cow position:
               
chr16:41696039-41696196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
237-396
               

               
Cow position:
               
chr16:31011359-31011520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
241-395
               

               
Cow position:
               
chr16:5396781-5396625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
241-396
               

               
Cow position:
               
chr16:3938975-3938820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
241-396
               

               
Cow position:
               
chr16:5293650-5293805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
246-396
               

               
Cow position:
               
chr16:23515725-23515574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               
Show alignments to all cow chromosomes.