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Cow genome map

           
Conread name:
           
Utr2-C0001807_I07
        

               
Conread position:
               
1-166
               

               
Cow position:
               
chr22:13017001-13016837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr22:1791781-1791969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr22:23856841-23857170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr22:10294843-10295216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 34
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr22:15568225-15567834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr22:36633025-36633324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 28
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr22:13861381-13861689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr22:37029808-37029486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr22:13286238-13286635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 216
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr22:1848858-1849263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
3-122
               

               
Cow position:
               
chr22:33985971-33985849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr22:28289880-28290019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr22:11987422-11987270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr22:47927555-47927727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr22:30472841-30473029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr22:30689426-30689622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr22:45685238-45685024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
37, 192
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr22:9734650-9734858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr22:2702023-2702241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 183
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr22:6360693-6360475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr22:1601978-1602202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr22:11500573-11500793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr22:47582701-47582915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr22:36569747-36569521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr22:30954834-30955061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr22:13011482-13011218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr22:16812368-16812103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr22:37324341-37324608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr22:5675377-5675115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr22:19653190-19652917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr22:17993235-17992959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr22:34398660-34398384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr22:26097819-26097546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr22:22160515-22160815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr22:7884786-7885082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr22:25476858-25477142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr22:12946370-12946081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr22:40720493-40720193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
3-313
               

               
Cow position:
               
chr22:864723-864411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr22:4645572-4645876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr22:15090535-15090848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr22:1975407-1975716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr22:5384450-5384761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr22:28058249-28057940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr22:10314872-10315188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr22:44180388-44180705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr22:5282302-5282610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr22:21355350-21355028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr22:22222987-22223299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr22:25943276-25943587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr22:34616104-34616419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr22:21502534-21502858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 289
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr22:25743157-25742835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr22:38940154-38939826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr22:8481442-8481763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr22:3316923-3317244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr22:17295136-17294815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr22:17764172-17764498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
41, 245
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr22:26658850-26659163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr22:2623720-2623399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr22:12968275-12967945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr22:17814023-17814353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr22:6123101-6122761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
168, 27
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr22:6493965-6494287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr22:14691181-14690846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr22:16620968-16621305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr22:34726467-34726789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr22:34750472-34750797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr22:43119934-43119605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr22:16327300-16327621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr22:41245040-41245381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:4017270-4017601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr22:7153685-7154001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr22:26141067-26141402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 224
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr22:10920069-10919724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 296
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr22:38107491-38107820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr22:15039390-15039036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr22:29290342-29289991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr22:4119773-4119404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr22:27825631-27826016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr22:38930719-38930331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
27, 231
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr22:1068121-1067737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr22:24066439-24066064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-386
               

               
Cow position:
               
chr22:15068220-15068607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr22:12681998-12681621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr22:40121083-40120693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr22:44740898-44741250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr22:59401-59795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr22:8877067-8877431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr22:10302805-10303197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
27, 185
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr22:10631167-10631570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 363
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr22:11130666-11131051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr22:14143311-14142942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr22:3908713-3909117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr22:30483707-30484087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 173
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr22:29013672-29014068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr22:22861117-22860726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr22:26786148-26786543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr22:34441840-34441447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr22:4108944-4108542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr22:10937038-10936663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr22:13670375-13669981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr22:16273425-16273827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 301
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:1309933-1309551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:2403667-2404067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 266
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:3842422-3842804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:6149591-6149201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 134
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:6754459-6754076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:8324040-8324435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:8882819-8883197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:11697413-11697008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:14091437-14091034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:16532875-16533259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:23115510-23115120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:25246704-25247096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:32326596-32326986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:36539878-36539472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:37067003-37066620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 147
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:534288-534677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:3251196-3250792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:4061148-4060760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:4563157-4563544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:6610559-6610170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:8138463-8138067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
172, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:9127197-9127586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:10161756-10162155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 140
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:11613215-11613614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 184
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:13957855-13957457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:14179037-14178644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 179
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:17950162-17949789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:18259023-18259404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:21890565-21890178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:24584248-24583884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:25222108-25221715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 252
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:25237346-25236941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:26339555-26339952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:30094040-30094431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:30698974-30699353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:40048358-40048746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:40349145-40349529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:41829435-41829047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr22:43812623-43812253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr22:4043728-4044112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr22:6721272-6720892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr22:15950582-15950201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 29
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr22:18838045-18838439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr22:21012185-21012574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr22:28640359-28639967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 185
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr22:43788334-43787953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
4-152
               

               
Cow position:
               
chr22:11200833-11200980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr22:3944970-3945135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr22:1279593-1279271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 245
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr22:3964981-3965310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr22:7882346-7882732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr22:28146480-28146864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr22:27818799-27819182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr22:2470451-2470050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr22:8412320-8412718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr22:9977615-9977982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr22:10122184-10122556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr22:12572999-12573393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr22:30998693-30999078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr22:40374402-40374794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr22:44717506-44717908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr22:10685292-10684909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 31
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chr22:33949205-33949043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr22:19848600-19848424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr22:4974623-4974403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr22:8283777-8284020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr22:3993407-3993677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr22:644964-644657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr22:2148370-2148682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr22:1590817-1591148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 163
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr22:30049776-30049440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-369
               

               
Cow position:
               
chr22:13735468-13735111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
5-395
               

               
Cow position:
               
chr22:23689410-23689017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr22:15490456-15490843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr22:28071351-28071746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr22:30269210-30269589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr22:41898652-41898261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr22:43397814-43398187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr22:10420828-10421161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr22:1289721-1289342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr22:28370744-28371119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
9-173
               

               
Cow position:
               
chr22:7252847-7252677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr22:911903-912167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 26
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr22:21295926-21295601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 64
               

               
Conread position:
               
9-396
               

               
Cow position:
               
chr22:12800464-12800862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
9-396
               

               
Cow position:
               
chr22:17852822-17852450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
10-143
               

               
Cow position:
               
chr22:34930947-34930809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr22:30710193-30710439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
10-323
               

               
Cow position:
               
chr22:14924928-14924618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr22:14378883-14378510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
10-394
               

               
Cow position:
               
chr22:41971356-41970971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
10-395
               

               
Cow position:
               
chr22:1326219-1326605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
10-395
               

               
Cow position:
               
chr22:5595990-5595621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr22:4372843-4373222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr22:20626642-20627021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chr22:26184359-26184060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
11-396
               

               
Cow position:
               
chr22:12315614-12315995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
11-396
               

               
Cow position:
               
chr22:38439355-38438970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
12-333
               

               
Cow position:
               
chr22:22907997-22908310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
12-387
               

               
Cow position:
               
chr22:45513717-45513345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
12-388
               

               
Cow position:
               
chr22:3533750-3534111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
12-396
               

               
Cow position:
               
chr22:27171454-27171081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chr22:19775621-19775334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
13-328
               

               
Cow position:
               
chr22:24734505-24734197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
13-394
               

               
Cow position:
               
chr22:6327971-6327588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
13-396
               

               
Cow position:
               
chr22:7164757-7165156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
14-199
               

               
Cow position:
               
chr22:12974587-12974397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
14-275
               

               
Cow position:
               
chr22:14882304-14882050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
14-313
               

               
Cow position:
               
chr22:845708-846007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
14-314
               

               
Cow position:
               
chr22:13300215-13300516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
14-320
               

               
Cow position:
               
chr22:43743524-43743234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr22:10632721-10633027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr22:23122220-23121889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
14-323
               

               
Cow position:
               
chr22:10339307-10339005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 19
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr22:5337792-5337483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
14-333
               

               
Cow position:
               
chr22:21530545-21530235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
14-333
               

               
Cow position:
               
chr22:27274887-27274576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
14-336
               

               
Cow position:
               
chr22:2216630-2216935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
14-338
               

               
Cow position:
               
chr22:47555650-47555979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
14-382
               

               
Cow position:
               
chr22:15025298-15024935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
14-393
               

               
Cow position:
               
chr22:22022692-22023089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 166
               

               
Conread position:
               
14-394
               

               
Cow position:
               
chr22:1484668-1485052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr22:25361296-25361665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr22:28356841-28357215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
15-139
               

               
Cow position:
               
chr22:11489344-11489463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
15-153
               

               
Cow position:
               
chr22:31194880-31195022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
15-318
               

               
Cow position:
               
chr22:877318-877625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
15-333
               

               
Cow position:
               
chr22:2627377-2627705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
15-337
               

               
Cow position:
               
chr22:18926158-18926482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
15-384
               

               
Cow position:
               
chr22:41982908-41982543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
15-389
               

               
Cow position:
               
chr22:37139253-37139609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
15-393
               

               
Cow position:
               
chr22:891333-890972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
15-393
               

               
Cow position:
               
chr22:9372323-9372711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
15-394
               

               
Cow position:
               
chr22:3325388-3325773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
15-396
               

               
Cow position:
               
chr22:12803578-12803200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
16-263
               

               
Cow position:
               
chr22:10678177-10677937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
16-319
               

               
Cow position:
               
chr22:27047592-27047303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
16-324
               

               
Cow position:
               
chr22:34712522-34712840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 179
               

               
Conread position:
               
16-390
               

               
Cow position:
               
chr22:29955193-29954834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
17-275
               

               
Cow position:
               
chr22:35753498-35753243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
17-357
               

               
Cow position:
               
chr22:4990360-4990019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 167
               

               
Conread position:
               
17-396
               

               
Cow position:
               
chr22:7967509-7967884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 224
               

               
Conread position:
               
29-395
               

               
Cow position:
               
chr22:21567817-21568178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
31-338
               

               
Cow position:
               
chr22:3315937-3316224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
32-200
               

               
Cow position:
               
chr22:23119981-23120151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
32-242
               

               
Cow position:
               
chr22:41271172-41270968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
32-292
               

               
Cow position:
               
chr22:42605451-42605720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr22:8397992-8397710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 148
               

               
Conread position:
               
32-393
               

               
Cow position:
               
chr22:12388915-12389287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr22:3269651-3269377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
33-337
               

               
Cow position:
               
chr22:32895043-32895345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
33-390
               

               
Cow position:
               
chr22:6097199-6096834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
33-395
               

               
Cow position:
               
chr22:32698584-32698950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 201
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr22:8446764-8446917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
105, 149
               

               
Conread position:
               
34-212
               

               
Cow position:
               
chr22:18219062-18218886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
34-254
               

               
Cow position:
               
chr22:26041424-26041644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
34-269
               

               
Cow position:
               
chr22:15753195-15753444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
34-279
               

               
Cow position:
               
chr22:11778786-11778540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 149
               

               
Conread position:
               
34-292
               

               
Cow position:
               
chr22:42946231-42945965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 107
               

               
Conread position:
               
34-318
               

               
Cow position:
               
chr22:46568060-46567785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
34-323
               

               
Cow position:
               
chr22:2523791-2524077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
34-323
               

               
Cow position:
               
chr22:7851788-7852076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 126
               

               
Conread position:
               
34-324
               

               
Cow position:
               
chr22:590164-590453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 106
               

               
Conread position:
               
34-324
               

               
Cow position:
               
chr22:26166795-26166509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
105, 148
               

               
Conread position:
               
34-326
               

               
Cow position:
               
chr22:34476184-34475881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr22:3950075-3950376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr22:13769299-13769600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 75
               

               
Conread position:
               
34-333
               

               
Cow position:
               
chr22:16044596-16044292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr22:8116262-8115960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
34-338
               

               
Cow position:
               
chr22:23176616-23176311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
69, 126
               

               
Conread position:
               
34-385
               

               
Cow position:
               
chr22:14366125-14365775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 82
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr22:36433141-36432791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
34-390
               

               
Cow position:
               
chr22:5290671-5291037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 146
               

               
Conread position:
               
34-390
               

               
Cow position:
               
chr22:31646323-31646665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 32
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr22:2095377-2095741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 149
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr22:11600863-11601220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
65, 140
               

               
Conread position:
               
34-394
               

               
Cow position:
               
chr22:15959946-15959588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 168
               

               
Conread position:
               
34-394
               

               
Cow position:
               
chr22:23980388-23980021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
63, 257
               

               
Conread position:
               
34-394
               

               
Cow position:
               
chr22:39696117-39696483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
210, 8
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr22:6622417-6622064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr22:8733503-8733159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
206, 27
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr22:10532323-10532680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr22:16292092-16291746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr22:32661332-32661701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:1651332-1651677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
207, 49
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:4356918-4357271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:4583384-4583749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:8090700-8090347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:10567875-10567531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:17152506-17152876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 108
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:18021196-18020843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 71
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:22612941-22613290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 35
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:32480654-32480279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
145, 103
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:37201677-37202036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
34-396
               

               
Cow position:
               
chr22:45796168-45796532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr22:6709949-6709601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
35-268
               

               
Cow position:
               
chr22:16822929-16823159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
104, 141
               

               
Conread position:
               
35-270
               

               
Cow position:
               
chr22:17132584-17132349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
35-307
               

               
Cow position:
               
chr22:9283772-9283500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 48
               

               
Conread position:
               
35-311
               

               
Cow position:
               
chr22:27740718-27740992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
35-318
               

               
Cow position:
               
chr22:28665113-28665392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
35-323
               

               
Cow position:
               
chr22:16251737-16251459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
35-338
               

               
Cow position:
               
chr22:23854802-23855098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
35-395
               

               
Cow position:
               
chr22:23759183-23758822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
35-395
               

               
Cow position:
               
chr22:27577563-27577932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr22:5616130-5616484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 140
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr22:6215731-6215369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 60
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr22:33485777-33485437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 132
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr22:40071803-40072150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
36-253
               

               
Cow position:
               
chr22:25629936-25629721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
36-393
               

               
Cow position:
               
chr22:4076068-4075700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
36-397
               

               
Cow position:
               
chr22:26151289-26150927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
37-310
               

               
Cow position:
               
chr22:14638652-14638376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
38-333
               

               
Cow position:
               
chr22:26969611-26969914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
40-279
               

               
Cow position:
               
chr22:30963953-30964198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
40-322
               

               
Cow position:
               
chr22:26316300-26316569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 135
               

               
Conread position:
               
40-333
               

               
Cow position:
               
chr22:2912751-2912466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
40-334
               

               
Cow position:
               
chr22:22155436-22155728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr22:15760203-15760423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
42-324
               

               
Cow position:
               
chr22:31510535-31510263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 118
               

               
Conread position:
               
42-396
               

               
Cow position:
               
chr22:10416048-10416414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 333
               

               
Conread position:
               
43-275
               

               
Cow position:
               
chr22:27835364-27835599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
43-324
               

               
Cow position:
               
chr22:1563416-1563138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 95
               

               
Conread position:
               
43-355
               

               
Cow position:
               
chr22:16053142-16053456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
44-338
               

               
Cow position:
               
chr22:24176048-24175767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
44-395
               

               
Cow position:
               
chr22:33448249-33447891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
44-396
               

               
Cow position:
               
chr22:45807675-45808017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 126
               

               
Conread position:
               
45-329
               

               
Cow position:
               
chr22:24628814-24628538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
46-243
               

               
Cow position:
               
chr22:27291932-27292125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
93, 130
               

               
Conread position:
               
46-338
               

               
Cow position:
               
chr22:19173536-19173831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
46-396
               

               
Cow position:
               
chr22:9668402-9668767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 260
               

               
Conread position:
               
46-396
               

               
Cow position:
               
chr22:36193692-36194019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
46-396
               

               
Cow position:
               
chr22:39508203-39507852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
47-396
               

               
Cow position:
               
chr22:30818049-30818397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 77
               

               
Conread position:
               
48-396
               

               
Cow position:
               
chr22:33399642-33399301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
49-258
               

               
Cow position:
               
chr22:226613-226405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
49-395
               

               
Cow position:
               
chr22:43131708-43131367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr22:32189007-32188740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
50-334
               

               
Cow position:
               
chr22:27329049-27328768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
50-396
               

               
Cow position:
               
chr22:15153838-15154190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
50-397
               

               
Cow position:
               
chr22:14245594-14245249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
52-270
               

               
Cow position:
               
chr22:1874536-1874754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
52-321
               

               
Cow position:
               
chr22:45845989-45846253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 110
               

               
Conread position:
               
53-390
               

               
Cow position:
               
chr22:42635587-42635250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 67
               

               
Conread position:
               
54-323
               

               
Cow position:
               
chr22:1266085-1265810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 240
               

               
Conread position:
               
54-337
               

               
Cow position:
               
chr22:23833132-23833423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 272
               

               
Conread position:
               
54-395
               

               
Cow position:
               
chr22:3566021-3566354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
55-397
               

               
Cow position:
               
chr22:27267384-27267743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
56-333
               

               
Cow position:
               
chr22:25387172-25387451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
60-386
               

               
Cow position:
               
chr22:17193239-17193572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
61-396
               

               
Cow position:
               
chr22:15668622-15668295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
63-280
               

               
Cow position:
               
chr22:7838448-7838661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
64-333
               

               
Cow position:
               
chr22:25539846-25540123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
64-366
               

               
Cow position:
               
chr22:17224809-17224511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
64-393
               

               
Cow position:
               
chr22:40789424-40789742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 73
               

               
Conread position:
               
64-396
               

               
Cow position:
               
chr22:14372040-14372355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
65-396
               

               
Cow position:
               
chr22:16095045-16094718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
66-390
               

               
Cow position:
               
chr22:27066249-27066565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
66-395
               

               
Cow position:
               
chr22:1035961-1035634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
66-395
               

               
Cow position:
               
chr22:11767193-11766861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
69-270
               

               
Cow position:
               
chr22:21325874-21325672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
69-323
               

               
Cow position:
               
chr22:21393459-21393201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
70, 239
               

               
Conread position:
               
69-337
               

               
Cow position:
               
chr22:31153816-31154085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
159, 102
               

               
Conread position:
               
69-396
               

               
Cow position:
               
chr22:34631997-34632339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
196, 112
               

               
Conread position:
               
69-396
               

               
Cow position:
               
chr22:34735728-34736036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
70-275
               

               
Cow position:
               
chr22:30577384-30577581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
72-395
               

               
Cow position:
               
chr22:27681578-27681911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
72-395
               

               
Cow position:
               
chr22:40387022-40387338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
73-396
               

               
Cow position:
               
chr22:31599314-31599620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
73-396
               

               
Cow position:
               
chr22:44410590-44410904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
76-396
               

               
Cow position:
               
chr22:19827998-19827673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
77-395
               

               
Cow position:
               
chr22:2123162-2123477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
80-395
               

               
Cow position:
               
chr22:12929404-12929091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
81-279
               

               
Cow position:
               
chr22:15731072-15731264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
83-395
               

               
Cow position:
               
chr22:1986873-1987158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
87-338
               

               
Cow position:
               
chr22:12527247-12526990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 115
               

               
Conread position:
               
88-306
               

               
Cow position:
               
chr22:4011063-4011281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
88-319
               

               
Cow position:
               
chr22:12341074-12341306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
88-366
               

               
Cow position:
               
chr22:43237528-43237249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
88-394
               

               
Cow position:
               
chr22:27619607-27619923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
88-395
               

               
Cow position:
               
chr22:5837146-5837448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 191
               

               
Conread position:
               
88-395
               

               
Cow position:
               
chr22:27828263-27828564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
89-396
               

               
Cow position:
               
chr22:37947603-37947909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 205
               

               
Conread position:
               
92-393
               

               
Cow position:
               
chr22:38320795-38320522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
97-395
               

               
Cow position:
               
chr22:30697048-30697335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
97-396
               

               
Cow position:
               
chr22:42617888-42618183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
98-332
               

               
Cow position:
               
chr22:617010-617244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
98-338
               

               
Cow position:
               
chr22:1870990-1871225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
98-338
               

               
Cow position:
               
chr22:6852694-6852456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
98-390
               

               
Cow position:
               
chr22:10609243-10609539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 191
               

               
Conread position:
               
98-395
               

               
Cow position:
               
chr22:12829722-12829423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
98-395
               

               
Cow position:
               
chr22:19890849-19891146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
98-395
               

               
Cow position:
               
chr22:22013640-22013936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
98-395
               

               
Cow position:
               
chr22:23736122-23735825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
98-396
               

               
Cow position:
               
chr22:12892477-12892173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
100-320
               

               
Cow position:
               
chr22:13222003-13222228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
100-333
               

               
Cow position:
               
chr22:34104785-34104548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
102-388
               

               
Cow position:
               
chr22:39215723-39215432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
102-396
               

               
Cow position:
               
chr22:285466-285179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
103-393
               

               
Cow position:
               
chr22:39602176-39602470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
106-390
               

               
Cow position:
               
chr22:9597683-9597403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
108-337
               

               
Cow position:
               
chr22:26074821-26075049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
110-387
               

               
Cow position:
               
chr22:1983753-1984036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr22:898746-899026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr22:1500793-1501070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
113-396
               

               
Cow position:
               
chr22:530662-530390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
114-331
               

               
Cow position:
               
chr22:24915742-24915959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
114-396
               

               
Cow position:
               
chr22:25809365-25809093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
115-337
               

               
Cow position:
               
chr22:4315534-4315757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
115-396
               

               
Cow position:
               
chr22:25254081-25254362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
116-386
               

               
Cow position:
               
chr22:18933813-18933533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
116-396
               

               
Cow position:
               
chr22:7140549-7140836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 174
               

               
Conread position:
               
116-396
               

               
Cow position:
               
chr22:24903496-24903779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
117-226
               

               
Cow position:
               
chr22:44262995-44263106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
117-284
               

               
Cow position:
               
chr22:41979935-41979771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
117-393
               

               
Cow position:
               
chr22:27275372-27275650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
186, 47
               

               
Conread position:
               
118-318
               

               
Cow position:
               
chr22:24336436-24336636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
118-396
               

               
Cow position:
               
chr22:17652342-17652620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 210
               

               
Conread position:
               
119-396
               

               
Cow position:
               
chr22:1659072-1659355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
65, 261
               

               
Conread position:
               
120-384
               

               
Cow position:
               
chr22:43321259-43321527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
121-249
               

               
Cow position:
               
chr22:37086046-37085919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
121-337
               

               
Cow position:
               
chr22:26122809-26123026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
122-396
               

               
Cow position:
               
chr22:2109706-2109442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
123-330
               

               
Cow position:
               
chr22:10553771-10553564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
124-390
               

               
Cow position:
               
chr22:12749984-12749731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
124-396
               

               
Cow position:
               
chr22:12678505-12678233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
124-396
               

               
Cow position:
               
chr22:14214448-14214179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
127-331
               

               
Cow position:
               
chr22:25846403-25846200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
127-333
               

               
Cow position:
               
chr22:10285885-10286094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
128-395
               

               
Cow position:
               
chr22:16541733-16541462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
129-393
               

               
Cow position:
               
chr22:9171325-9171586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
10, 242
               

               
Conread position:
               
132-334
               

               
Cow position:
               
chr22:1025810-1026015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
133-395
               

               
Cow position:
               
chr22:1588217-1588482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
134-396
               

               
Cow position:
               
chr22:12981798-12981537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
137-396
               

               
Cow position:
               
chr22:23249798-23249549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
138-390
               

               
Cow position:
               
chr22:26056940-26056685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 240
               

               
Conread position:
               
138-396
               

               
Cow position:
               
chr22:12157913-12157661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
139-328
               

               
Cow position:
               
chr22:4137720-4137533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
140-396
               

               
Cow position:
               
chr22:6176358-6176094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
140-396
               

               
Cow position:
               
chr22:21526851-21527097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
140-397
               

               
Cow position:
               
chr22:1349755-1350016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 238
               

               
Conread position:
               
141-338
               

               
Cow position:
               
chr22:26706875-26706678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
142-308
               

               
Cow position:
               
chr22:10929827-10929665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
143-311
               

               
Cow position:
               
chr22:12686744-12686584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
144-394
               

               
Cow position:
               
chr22:15737168-15737416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 225
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr22:21235497-21235307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
146-333
               

               
Cow position:
               
chr22:23440358-23440172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
147-396
               

               
Cow position:
               
chr22:4054647-4054415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
152-394
               

               
Cow position:
               
chr22:2101003-2100763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
157-396
               

               
Cow position:
               
chr22:23676017-23675785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
160-388
               

               
Cow position:
               
chr22:28672096-28672315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
161-395
               

               
Cow position:
               
chr22:7497157-7496920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 15
               

               
Conread position:
               
162-396
               

               
Cow position:
               
chr22:12188527-12188286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
162-396
               

               
Cow position:
               
chr22:12195614-12195372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
164-396
               

               
Cow position:
               
chr22:33985845-33985619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
192, 81
               

               
Conread position:
               
165-390
               

               
Cow position:
               
chr22:12902892-12902674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
166-396
               

               
Cow position:
               
chr22:24134366-24134135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
170-324
               

               
Cow position:
               
chr22:4149384-4149534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
170-396
               

               
Cow position:
               
chr22:14141381-14141153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
171-395
               

               
Cow position:
               
chr22:6289540-6289312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
173-396
               

               
Cow position:
               
chr22:26233596-26233821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
177-395
               

               
Cow position:
               
chr22:1776027-1776250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
180-338
               

               
Cow position:
               
chr22:12974197-12974041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
182-323
               

               
Cow position:
               
chr22:14381632-14381773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-324
               

               
Cow position:
               
chr22:23036137-23036282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
182-393
               

               
Cow position:
               
chr22:10557253-10557457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
182-393
               

               
Cow position:
               
chr22:17198111-17198323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
131, 190
               

               
Conread position:
               
182-395
               

               
Cow position:
               
chr22:35215521-35215738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr22:4156844-4156628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr22:4163952-4164167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
150, 51
               

               
Conread position:
               
183-324
               

               
Cow position:
               
chr22:1977723-1977864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr22:1714891-1714675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr22:4657069-4656859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
184-334
               

               
Cow position:
               
chr22:30253175-30253328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
187-334
               

               
Cow position:
               
chr22:10323858-10324006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
187-390
               

               
Cow position:
               
chr22:33948994-33948795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
187-396
               

               
Cow position:
               
chr22:21905450-21905656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
171, 17
               

               
Conread position:
               
192-396
               

               
Cow position:
               
chr22:2876814-2876610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 8
               

               
Conread position:
               
195-353
               

               
Cow position:
               
chr22:8710387-8710229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-390
               

               
Cow position:
               
chr22:16724701-16724506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
118, 176
               

               
Conread position:
               
195-396
               

               
Cow position:
               
chr22:7584250-7584055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
195-396
               

               
Cow position:
               
chr22:16813784-16813983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
198-392
               

               
Cow position:
               
chr22:11189020-11189214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
200-396
               

               
Cow position:
               
chr22:1523209-1523410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
203-396
               

               
Cow position:
               
chr22:6360190-6360005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
204-396
               

               
Cow position:
               
chr22:8327741-8327929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
151, 63
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr22:24890220-24890409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
209-389
               

               
Cow position:
               
chr22:45684038-45683853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
209-395
               

               
Cow position:
               
chr22:26188870-26189059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
210-396
               

               
Cow position:
               
chr22:2184711-2184528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
210-396
               

               
Cow position:
               
chr22:8446917-8447095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
210-396
               

               
Cow position:
               
chr22:27580412-27580237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
210-397
               

               
Cow position:
               
chr22:29134954-29135144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
211-396
               

               
Cow position:
               
chr22:12777375-12777196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
157, 114
               

               
Conread position:
               
212-396
               

               
Cow position:
               
chr22:7518558-7518742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
215-396
               

               
Cow position:
               
chr22:28493273-28493093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
224-396
               

               
Cow position:
               
chr22:9735284-9735456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
225-395
               

               
Cow position:
               
chr22:13951279-13951449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-396
               

               
Cow position:
               
chr22:17745835-17746007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
233-388
               

               
Cow position:
               
chr22:16655714-16655560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
233-390
               

               
Cow position:
               
chr22:755823-755671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
233-396
               

               
Cow position:
               
chr22:1304529-1304367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
237-396
               

               
Cow position:
               
chr22:23762823-23762664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
238-393
               

               
Cow position:
               
chr22:12207677-12207522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-390
               

               
Cow position:
               
chr22:33566057-33565913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-396
               

               
Cow position:
               
chr22:30684765-30684912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
247-396
               

               
Cow position:
               
chr22:10594646-10594798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
248-392
               

               
Cow position:
               
chr22:26930901-26931045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-396
               

               
Cow position:
               
chr22:18145578-18145723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
266-396
               

               
Cow position:
               
chr22:29546696-29546825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.