Cow genome map
| Conread name: | Utr2-C0001808_K12 |
| Conread position: | 1-228 |
| Cow position: | chr10:2407941-2408167 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 13-247 |
| Cow position: | chr10:34811792-34811556 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 21-268 |
| Cow position: | chr10:28508988-28509241 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 24-234 |
| Cow position: | chr10:21392028-21392252 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 29-234 |
| Cow position: | chr10:57773643-57773441 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 40-228 |
| Cow position: | chr10:42387238-42387429 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 138 |
| Conread position: | 43-265 |
| Cow position: | chr10:47617548-47617772 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 154, 30 |
| Conread position: | 81-321 |
| Cow position: | chr10:21709029-21709258 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 86-288 |
| Cow position: | chr10:27133159-27133365 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 95-229 |
| Cow position: | chr10:20568987-20568852 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 95-272 |
| Cow position: | chr10:13765316-13765490 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 95-312 |
| Cow position: | chr10:52296349-52296119 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 98-270 |
| Cow position: | chr10:4167913-4167737 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 102-234 |
| Cow position: | chr10:45113845-45113717 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 102-237 |
| Cow position: | chr10:31362366-31362501 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 102-252 |
| Cow position: | chr10:55122635-55122486 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 138, 95 |
| Conread position: | 102-270 |
| Cow position: | chr10:23936326-23936159 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 102-274 |
| Cow position: | chr10:8923780-8923613 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 110 |
| Conread position: | 102-280 |
| Cow position: | chr10:60032733-60032908 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 102-281 |
| Cow position: | chr10:24871730-24871552 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 102-293 |
| Cow position: | chr10:30352689-30352497 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 140 |
| Conread position: | 102-293 |
| Cow position: | chr10:37235708-37235897 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 100, 91 |
| Conread position: | 102-294 |
| Cow position: | chr10:59193405-59193596 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 102-318 |
| Cow position: | chr10:50315818-50315610 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 196, 106 |
| Conread position: | 102-320 |
| Cow position: | chr10:30370319-30370541 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 138, 37 |
| Conread position: | 102-321 |
| Cow position: | chr10:65734791-65734578 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 188, 127 |
| Conread position: | 102-323 |
| Cow position: | chr10:35857213-35857419 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 27 |
| Conread position: | 102-325 |
| Cow position: | chr10:27119346-27119574 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 67 |
| Conread position: | 103-513 |
| Cow position: | chr10:14817321-14817744 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 184, 243 |
| Conread position: | 108-323 |
| Cow position: | chr10:16432467-16432687 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 109-261 |
| Cow position: | chr10:15115453-15115302 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 107, 88 |
| Conread position: | 111-257 |
| Cow position: | chr10:9576203-9576350 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 114-234 |
| Cow position: | chr10:6012204-6012322 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 19 |
| Conread position: | 114-253 |
| Cow position: | chr10:57958461-57958598 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 116-273 |
| Cow position: | chr10:28623416-28623258 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 119-317 |
| Cow position: | chr10:65130834-65131036 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 134 |
| Conread position: | 120-279 |
| Cow position: | chr10:31266501-31266659 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 92 |
| Conread position: | 125-286 |
| Cow position: | chr10:2407287-2407444 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 72, 105 |
| Conread position: | 125-310 |
| Cow position: | chr10:17806147-17805974 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 127-317 |
| Cow position: | chr10:51844718-51844540 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 323-512 |
| Cow position: | chr10:28933326-28933141 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 123, 62 |
Show alignments to all cow chromosomes.