Cow genome map
| Conread name: | Utr2-C0001808_K12 |
| Conread position: | 7-234 |
| Cow position: | chr11:8019918-8019701 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 7-244 |
| Cow position: | chr11:21841841-21842071 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 22-224 |
| Cow position: | chr11:2688416-2688624 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 28-228 |
| Cow position: | chr11:55354430-55354637 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 39-274 |
| Cow position: | chr11:59373526-59373756 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 43-268 |
| Cow position: | chr11:58793760-58793982 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 195 |
| Conread position: | 57-323 |
| Cow position: | chr11:42003054-42003339 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 60-255 |
| Cow position: | chr11:65988124-65987926 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 60-323 |
| Cow position: | chr11:60512682-60512408 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 81-329 |
| Cow position: | chr11:48474577-48474335 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 85-293 |
| Cow position: | chr11:80011969-80012172 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 96-266 |
| Cow position: | chr11:50778227-50778060 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 118 |
| Conread position: | 96-321 |
| Cow position: | chr11:40608866-40609094 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 98-321 |
| Cow position: | chr11:81162579-81162793 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 98-323 |
| Cow position: | chr11:48650646-48650430 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 101-281 |
| Cow position: | chr11:70399709-70399531 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 95, 22 |
| Conread position: | 101-321 |
| Cow position: | chr11:36229525-36229761 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 101-323 |
| Cow position: | chr11:22505096-22504884 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 102-255 |
| Cow position: | chr11:63920439-63920592 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 79 |
| Conread position: | 102-272 |
| Cow position: | chr11:57111462-57111627 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 102-273 |
| Cow position: | chr11:10620475-10620648 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 59 |
| Conread position: | 102-321 |
| Cow position: | chr11:20761694-20761465 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 29 |
| Conread position: | 102-321 |
| Cow position: | chr11:25165290-25165065 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 102-321 |
| Cow position: | chr11:37547063-37547281 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 95, 169 |
| Conread position: | 102-323 |
| Cow position: | chr11:33934879-33935091 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 102-323 |
| Cow position: | chr11:53142364-53142576 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 103-234 |
| Cow position: | chr11:48703352-48703220 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 103-273 |
| Cow position: | chr11:58614508-58614337 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 99 |
| Conread position: | 103-321 |
| Cow position: | chr11:46772708-46772935 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 108-273 |
| Cow position: | chr11:8828786-8828952 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 115-273 |
| Cow position: | chr11:8247025-8246863 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 115-320 |
| Cow position: | chr11:56654384-56654171 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 102 |
| Conread position: | 119-281 |
| Cow position: | chr11:6091814-6091980 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 147-323 |
| Cow position: | chr11:68245960-68246138 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 96 |
Show alignments to all cow chromosomes.