Cow genome map
| Conread name: | Utr2-C0001808_K12 |
| Conread position: | 1-324 |
| Cow position: | chr2:31264509-31264826 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 81, 27 |
| Conread position: | 7-206 |
| Cow position: | chr2:62037468-62037675 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 11-232 |
| Cow position: | chr2:45470799-45470582 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 23-208 |
| Cow position: | chr2:41162958-41162765 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 23-229 |
| Cow position: | chr2:8731854-8732067 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 30-321 |
| Cow position: | chr2:12635360-12635652 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 41-263 |
| Cow position: | chr2:32643327-32643103 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 43-231 |
| Cow position: | chr2:50809265-50809070 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 44-209 |
| Cow position: | chr2:15956120-15956290 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 140 |
| Conread position: | 60-263 |
| Cow position: | chr2:35359715-35359508 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 136 |
| Conread position: | 60-271 |
| Cow position: | chr2:36144943-36144730 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 60-318 |
| Cow position: | chr2:2689080-2688829 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 60-323 |
| Cow position: | chr2:31541411-31541133 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 228 |
| Conread position: | 60-323 |
| Cow position: | chr2:70933239-70933509 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 77-323 |
| Cow position: | chr2:32408595-32408833 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 81-233 |
| Cow position: | chr2:40691378-40691225 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 96-236 |
| Cow position: | chr2:80324975-80325114 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 98-232 |
| Cow position: | chr2:26219798-26219671 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 98-235 |
| Cow position: | chr2:50277894-50277757 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-324 |
| Cow position: | chr2:42897255-42897474 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 101-236 |
| Cow position: | chr2:44007166-44007029 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 102-234 |
| Cow position: | chr2:2253-2381 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 102-234 |
| Cow position: | chr2:72410378-72410510 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 102-255 |
| Cow position: | chr2:29734374-29734217 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 102-256 |
| Cow position: | chr2:42733635-42733480 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 102-267 |
| Cow position: | chr2:42927581-42927748 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 102-270 |
| Cow position: | chr2:36878348-36878518 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 102-278 |
| Cow position: | chr2:30816825-30816648 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 97, 71 |
| Conread position: | 102-293 |
| Cow position: | chr2:79939569-79939749 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 60 |
| Conread position: | 102-321 |
| Cow position: | chr2:16415810-16415574 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 102-321 |
| Cow position: | chr2:41525852-41526072 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 186, 104 |
| Conread position: | 102-321 |
| Cow position: | chr2:46745789-46745568 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 102-323 |
| Cow position: | chr2:40427934-40428160 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 102-323 |
| Cow position: | chr2:47744850-47744619 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 102-323 |
| Cow position: | chr2:54726466-54726684 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 102-324 |
| Cow position: | chr2:39832091-39831875 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 95, 130 |
| Conread position: | 103-285 |
| Cow position: | chr2:27173236-27173052 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 140 |
| Conread position: | 103-321 |
| Cow position: | chr2:854380-854170 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 92, 121 |
| Conread position: | 104-239 |
| Cow position: | chr2:79075839-79075969 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 106-236 |
| Cow position: | chr2:53649890-53649760 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 91 |
| Conread position: | 106-269 |
| Cow position: | chr2:25928317-25928154 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 111-255 |
| Cow position: | chr2:62978803-62978950 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 116-322 |
| Cow position: | chr2:15347217-15347017 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 117-273 |
| Cow position: | chr2:24434435-24434588 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 94 |
| Conread position: | 119-293 |
| Cow position: | chr2:50606399-50606227 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 16 |
| Conread position: | 125-237 |
| Cow position: | chr2:55387395-55387282 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 136-331 |
| Cow position: | chr2:45880930-45881129 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 157-323 |
| Cow position: | chr2:43358149-43358322 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 9 |
Show alignments to all cow chromosomes.