Cow genome map
| Conread name: | Utr2-C0001808_K12 |
| Conread position: | 7-234 |
| Cow position: | chr21:30859402-30859172 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 33-233 |
| Cow position: | chr21:29252880-29253089 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 11, 169 |
| Conread position: | 40-291 |
| Cow position: | chr21:5635047-5634787 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 41-321 |
| Cow position: | chr21:37341835-37342116 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 47-258 |
| Cow position: | chr21:5425970-5425758 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 59-282 |
| Cow position: | chr21:33947266-33947494 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 60-234 |
| Cow position: | chr21:23478742-23478920 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 64-323 |
| Cow position: | chr21:38908547-38908286 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 217 |
| Conread position: | 66-234 |
| Cow position: | chr21:36712166-36711997 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 69-323 |
| Cow position: | chr21:21000062-21000308 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 81-259 |
| Cow position: | chr21:3047637-3047460 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 81-293 |
| Cow position: | chr21:37361521-37361738 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 116, 23 |
| Conread position: | 82-236 |
| Cow position: | chr21:3614310-3614156 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 98-236 |
| Cow position: | chr21:7132526-7132665 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 102-235 |
| Cow position: | chr21:21223222-21223088 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 102-310 |
| Cow position: | chr21:4276659-4276855 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 117 |
| Conread position: | 103-237 |
| Cow position: | chr21:44331357-44331489 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 106-236 |
| Cow position: | chr21:42414176-42414305 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 106-320 |
| Cow position: | chr21:21033542-21033338 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 93, 111 |
| Conread position: | 108-321 |
| Cow position: | chr21:12801824-12802037 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 112-321 |
| Cow position: | chr21:29484908-29484693 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 209 |
| Conread position: | 115-318 |
| Cow position: | chr21:7156674-7156455 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 116-321 |
| Cow position: | chr21:10515833-10516042 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 115 |
| Conread position: | 119-323 |
| Cow position: | chr21:28944448-28944664 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 163 |
| Conread position: | 125-321 |
| Cow position: | chr21:8618184-8617981 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 235-486 |
| Cow position: | chr21:29634258-29634004 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 60 |
Show alignments to all cow chromosomes.