Cow genome map
| Conread name: | Utr2-C0001808_K12 |
| Conread position: | 7-236 |
| Cow position: | chr4:63250961-63251198 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 7-323 |
| Cow position: | chr4:11176047-11175721 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 15-301 |
| Cow position: | chr4:4300486-4300194 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 182, 11 |
| Conread position: | 29-261 |
| Cow position: | chr4:22567817-22567584 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 38-233 |
| Cow position: | chr4:16339668-16339863 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 60-234 |
| Cow position: | chr4:58261244-58261425 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 63-235 |
| Cow position: | chr4:55270860-55271032 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 14 |
| Conread position: | 75-269 |
| Cow position: | chr4:20279234-20279033 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 83-243 |
| Cow position: | chr4:43495784-43495621 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 83-264 |
| Cow position: | chr4:44612883-44612701 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 86-235 |
| Cow position: | chr4:38999304-38999154 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 95-234 |
| Cow position: | chr4:42423933-42424073 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 98-236 |
| Cow position: | chr4:28377789-28377923 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 98-263 |
| Cow position: | chr4:41867306-41867143 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 31 |
| Conread position: | 98-323 |
| Cow position: | chr4:11389676-11389908 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 177, 33 |
| Conread position: | 98-323 |
| Cow position: | chr4:58948046-58948281 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 101-324 |
| Cow position: | chr4:9714594-9714367 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 202 |
| Conread position: | 102-237 |
| Cow position: | chr4:51851059-51850920 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 102-242 |
| Cow position: | chr4:21064896-21064759 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 102-278 |
| Cow position: | chr4:42638428-42638602 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 104-323 |
| Cow position: | chr4:61624735-61624955 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 93, 59 |
| Conread position: | 106-293 |
| Cow position: | chr4:38825434-38825610 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 125, 91 |
| Conread position: | 108-323 |
| Cow position: | chr4:34043897-34044108 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 89, 162 |
| Conread position: | 109-317 |
| Cow position: | chr4:31175154-31174939 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 119-262 |
| Cow position: | chr4:16831744-16831888 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 125-323 |
| Cow position: | chr4:56530050-56530253 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 74, 49 |
| Conread position: | 125-324 |
| Cow position: | chr4:3274694-3274894 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 116 |
Show alignments to all cow chromosomes.