Cow genome map
| Conread name: | Utr2-C0001808_K12 |
| Conread position: | 7-228 |
| Cow position: | chr6:62485918-62486148 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 7-234 |
| Cow position: | chr6:2640105-2640342 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 9-270 |
| Cow position: | chr6:49968749-49968477 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 22-321 |
| Cow position: | chr6:11035575-11035897 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 77, 60 |
| Conread position: | 29-234 |
| Cow position: | chr6:37644549-37644344 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 43-228 |
| Cow position: | chr6:14706446-14706634 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 60-255 |
| Cow position: | chr6:35613465-35613655 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 60-274 |
| Cow position: | chr6:48572931-48573148 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 60-293 |
| Cow position: | chr6:6995002-6995226 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 60-323 |
| Cow position: | chr6:30474282-30474004 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 71-279 |
| Cow position: | chr6:56041682-56041894 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 75-388 |
| Cow position: | chr6:3929256-3928939 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 81-321 |
| Cow position: | chr6:49685512-49685279 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 82-273 |
| Cow position: | chr6:16626949-16626760 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 113, 45 |
| Conread position: | 84-242 |
| Cow position: | chr6:68049364-68049203 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 95-261 |
| Cow position: | chr6:3374657-3374821 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 80 |
| Conread position: | 96-321 |
| Cow position: | chr6:36202739-36202508 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 97-320 |
| Cow position: | chr6:22986078-22986297 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 98-234 |
| Cow position: | chr6:10695780-10695644 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 87 |
| Conread position: | 98-237 |
| Cow position: | chr6:26728616-26728754 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 101-266 |
| Cow position: | chr6:1890934-1891103 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 102-236 |
| Cow position: | chr6:40032098-40031967 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 102-243 |
| Cow position: | chr6:60166425-60166566 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 102-259 |
| Cow position: | chr6:40137156-40137315 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 102-273 |
| Cow position: | chr6:60350390-60350563 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 102-293 |
| Cow position: | chr6:55455970-55456168 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 102-323 |
| Cow position: | chr6:22968986-22968776 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 134 |
| Conread position: | 102-323 |
| Cow position: | chr6:51191723-51191507 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 101 |
| Conread position: | 103-323 |
| Cow position: | chr6:25223335-25223553 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 94, 138 |
| Conread position: | 108-254 |
| Cow position: | chr6:60781547-60781689 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 109-321 |
| Cow position: | chr6:14201600-14201386 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 162 |
| Conread position: | 109-326 |
| Cow position: | chr6:3118296-3118520 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 86, 34 |
| Conread position: | 109-377 |
| Cow position: | chr6:65846545-65846825 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 226 |
| Conread position: | 119-321 |
| Cow position: | chr6:16288528-16288736 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 119-321 |
| Cow position: | chr6:66433840-66433636 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 113 |
| Conread position: | 124-324 |
| Cow position: | chr6:13717737-13717534 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 70 |
| Conread position: | 127-273 |
| Cow position: | chr6:29479924-29479776 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 115 |
| Conread position: | 133-324 |
| Cow position: | chr6:17736506-17736312 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 145-323 |
| Cow position: | chr6:30159736-30159561 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 170-321 |
| Cow position: | chr6:55143251-55143404 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 70 |
Show alignments to all cow chromosomes.