Cow genome map
| Conread name: | Utr2-C0001808_K12 |
| Conread position: | 6-231 |
| Cow position: | chr8:58291406-58291632 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 6, 18 |
| Conread position: | 7-207 |
| Cow position: | chr8:51443258-51443468 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 7-246 |
| Cow position: | chr8:20926033-20926271 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 97, 14 |
| Conread position: | 17-278 |
| Cow position: | chr8:36686960-36686685 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 176 |
| Conread position: | 23-207 |
| Cow position: | chr8:38987138-38986947 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 28-234 |
| Cow position: | chr8:10994287-10994500 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 28-289 |
| Cow position: | chr8:47668363-47668629 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 30-234 |
| Cow position: | chr8:18791419-18791632 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 30-257 |
| Cow position: | chr8:38261619-38261856 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 193 |
| Conread position: | 40-271 |
| Cow position: | chr8:42151727-42151966 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 53, 193 |
| Conread position: | 43-323 |
| Cow position: | chr8:13314637-13314907 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 82-238 |
| Cow position: | chr8:12660847-12661007 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 137 |
| Conread position: | 83-298 |
| Cow position: | chr8:6438031-6438249 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 83-321 |
| Cow position: | chr8:26877353-26877110 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 85-323 |
| Cow position: | chr8:44437664-44437422 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 95-321 |
| Cow position: | chr8:10622613-10622841 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 96-234 |
| Cow position: | chr8:35971732-35971591 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 98-262 |
| Cow position: | chr8:14354575-14354412 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 101-321 |
| Cow position: | chr8:20080193-20080401 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 187, 28 |
| Conread position: | 102-228 |
| Cow position: | chr8:38464893-38464766 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 102-232 |
| Cow position: | chr8:35211275-35211407 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 102-236 |
| Cow position: | chr8:25455284-25455150 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 111 |
| Conread position: | 102-254 |
| Cow position: | chr8:1107312-1107466 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 102-270 |
| Cow position: | chr8:42578198-42578365 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 166, 64 |
| Conread position: | 102-279 |
| Cow position: | chr8:16023764-16023936 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 173, 87 |
| Conread position: | 102-299 |
| Cow position: | chr8:23160831-23160628 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 115 |
| Conread position: | 103-234 |
| Cow position: | chr8:60746521-60746390 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 94, 73 |
| Conread position: | 103-323 |
| Cow position: | chr8:37180466-37180679 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 132, 98 |
| Conread position: | 106-238 |
| Cow position: | chr8:834242-834109 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 106-321 |
| Cow position: | chr8:24867870-24868083 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 127 |
| Conread position: | 106-321 |
| Cow position: | chr8:35580764-35580968 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 183, 34 |
| Conread position: | 111-279 |
| Cow position: | chr8:39039898-39039730 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 86, 102 |
| Conread position: | 111-321 |
| Cow position: | chr8:54231169-54230964 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 114-279 |
| Cow position: | chr8:19172908-19173075 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 34 |
| Conread position: | 119-236 |
| Cow position: | chr8:19642333-19642214 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 120-323 |
| Cow position: | chr8:60320385-60320185 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 91 |
| Conread position: | 125-273 |
| Cow position: | chr8:300160-300310 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 127-322 |
| Cow position: | chr8:51426214-51426011 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 127-323 |
| Cow position: | chr8:32719833-32719625 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 129-293 |
| Cow position: | chr8:9051163-9051329 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 138 |
| Conread position: | 129-321 |
| Cow position: | chr8:35583707-35583893 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 99 |
| Conread position: | 131-513 |
| Cow position: | chr8:20570370-20569987 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 112 |
Show alignments to all cow chromosomes.