Cow genome map

Conread name: Utr2-C0001808_O02

Conread position: 1-167
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 155, 0

Conread position: 1-236
Cow position:
Alignm length: 238
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 51

Conread position: 1-317
Cow position:
Alignm length: 318
Alignm identity: 204
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 221, 204

Conread position: 1-322
Cow position:
Alignm length: 322
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-355
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-356
Cow position:
Alignm length: 357
Alignm identity: 233
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 205, 210

Conread position: 1-384
Cow position:
Alignm length: 385
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 64

Conread position: 1-400
Cow position:
Alignm length: 400
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-402
Cow position:
Alignm length: 402
Alignm identity: 254
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-403
Cow position:
Alignm length: 405
Alignm identity: 252
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 202, 198

Conread position: 1-403
Cow position:
Alignm length: 404
Alignm identity: 252
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 205, 154

Conread position: 1-404
Cow position:
Alignm length: 405
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 197

Conread position: 1-429
Cow position:
Alignm length: 431
Alignm identity: 264
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 176, 199

Conread position: 1-436
Cow position:
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 197

Conread position: 1-437
Cow position:
Alignm length: 439
Alignm identity: 276
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 272, 287

Conread position: 1-437
Cow position:
Alignm length: 438
Alignm identity: 272
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 127, 114

Conread position: 1-437
Cow position:
Alignm length: 442
Alignm identity: 280
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 169, 181

Conread position: 1-437
Cow position:
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 0

Conread position: 1-437
Cow position:
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 0

Conread position: 1-437
Cow position:
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 1-437
Cow position:
Alignm length: 438
Alignm identity: 270
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 426, 0

Conread position: 1-438
Cow position:
Alignm length: 439
Alignm identity: 268
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 56

Conread position: 1-438
Cow position:
Alignm length: 439
Alignm identity: 272
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 211, 206

Conread position: 1-438
Cow position:
Alignm length: 441
Alignm identity: 269
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 117, 104

Conread position: 1-438
Cow position:
Alignm length: 439
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 104

Conread position: 1-438
Cow position:
Alignm length: 439
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 195

Conread position: 1-439
Cow position:
Alignm length: 442
Alignm identity: 279
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 100

Conread position: 1-439
Cow position:
Alignm length: 440
Alignm identity: 262
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 273, 286

Conread position: 1-439
Cow position:
Alignm length: 440
Alignm identity: 275
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 107, 116

Conread position: 1-439
Cow position:
Alignm length: 439
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-439
Cow position:
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 282
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 127, 113

Conread position: 1-440
Cow position:
Alignm length: 440
Alignm identity: 267
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-440
Cow position:
Alignm length: 441
Alignm identity: 262
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 379, 364

Conread position: 1-440
Cow position:
Alignm length: 441
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 114

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 280
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 99, 93

Conread position: 1-440
Cow position:
Alignm length: 442
Alignm identity: 281
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 201, 188

Conread position: 1-440
Cow position:
Alignm length: 442
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 1-440
Cow position:
Alignm length: 442
Alignm identity: 265
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 113

Conread position: 1-440
Cow position:
Alignm length: 441
Alignm identity: 272
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 126, 113

Conread position: 1-440
Cow position:
Alignm length: 444
Alignm identity: 272
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 33

Conread position: 1-440
Cow position:
Alignm length: 442
Alignm identity: 267
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 126, 105

Conread position: 1-441
Cow position:
Alignm length: 444
Alignm identity: 276
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 121, 127

Conread position: 1-442
Cow position:
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-446
Cow position:
Alignm length: 446
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-446
Cow position:
Alignm length: 446
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-446
Cow position:
Alignm length: 446
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-446
Cow position:
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-446
Cow position:
Alignm length: 446
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-449
Cow position:
Alignm length: 450
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 204

Conread position: 1-449
Cow position:
Alignm length: 451
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 211

Conread position: 1-450
Cow position:
Alignm length: 452
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 106

Conread position: 1-450
Cow position:
Alignm length: 452
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 121

Conread position: 1-450
Cow position:
Alignm length: 451
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 365, 375

Conread position: 1-451
Cow position:
Alignm length: 451
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-451
Cow position:
Alignm length: 452
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 184

Conread position: 1-453
Cow position:
Alignm length: 455
Alignm identity: 282
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 270, 277

Conread position: 1-455
Cow position:
Alignm length: 455
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 206

Conread position: 1-455
Cow position:
Alignm length: 455
Alignm identity: 275
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 230, 0

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 357

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 264

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 199

Conread position: 1-455
Cow position:
Alignm length: 459
Alignm identity: 290
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 210, 195

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 366

Conread position: 1-455
Cow position:
Alignm length: 457
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 204

Conread position: 1-455
Cow position:
Alignm length: 460
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 210

Conread position: 1-455
Cow position:
Alignm length: 462
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 108

Conread position: 1-455
Cow position:
Alignm length: 457
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 204

Conread position: 1-456
Cow position:
Alignm length: 461
Alignm identity: 287
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 107

Conread position: 1-456
Cow position:
Alignm length: 459
Alignm identity: 287
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 174, 184

Conread position: 1-458
Cow position:
Alignm length: 462
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 211

Conread position: 1-464
Cow position:
Alignm length: 465
Alignm identity: 290
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 278, 263

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-464
Cow position:
Alignm length: 465
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 367

Conread position: 2-448
Cow position:
Alignm length: 449
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 114

Conread position: 2-455
Cow position:
Alignm length: 456
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 183

Conread position: 2-456
Cow position:
Alignm length: 461
Alignm identity: 281
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 66, 56

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 280
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 126, 106

Conread position: 3-444
Cow position:
Alignm length: 442
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-444
Cow position:
Alignm length: 443
Alignm identity: 276
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 369, 376

Conread position: 3-450
Cow position:
Alignm length: 453
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 122

Conread position: 3-451
Cow position:
Alignm length: 450
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 376

Conread position: 3-455
Cow position:
Alignm length: 458
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 182

Conread position: 3-464
Cow position:
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-426
Cow position:
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 191

Conread position: 4-437
Cow position:
Alignm length: 436
Alignm identity: 270
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 119

Conread position: 4-437
Cow position:
Alignm length: 436
Alignm identity: 264
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 209, 193

Conread position: 4-439
Cow position:
Alignm length: 438
Alignm identity: 269
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 124, 102

Conread position: 4-440
Cow position:
Alignm length: 438
Alignm identity: 273
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 199, 194

Conread position: 4-440
Cow position:
Alignm length: 437
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-440
Cow position:
Alignm length: 437
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-440
Cow position:
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 105

Conread position: 4-444
Cow position:
Alignm length: 442
Alignm identity: 280
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 368, 375

Conread position: 4-450
Cow position:
Alignm length: 448
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 201

Conread position: 4-450
Cow position:
Alignm length: 447
Alignm identity: 268
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 404, 0

Conread position: 4-451
Cow position:
Alignm length: 448
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-452
Cow position:
Alignm length: 451
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 199

Conread position: 4-464
Cow position:
Alignm length: 461
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-440
Cow position:
Alignm length: 439
Alignm identity: 268
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 55

Conread position: 10-456
Cow position:
Alignm length: 448
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 348

Conread position: 31-440
Cow position:
Alignm length: 410
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 32-455
Cow position:
Alignm length: 426
Alignm identity: 261
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 17

Conread position: 33-438
Cow position:
Alignm length: 406
Alignm identity: 242
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 33-440
Cow position:
Alignm length: 411
Alignm identity: 247
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 61

Conread position: 39-438
Cow position:
Alignm length: 403
Alignm identity: 249
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 205, 209

Conread position: 40-438
Cow position:
Alignm length: 400
Alignm identity: 243
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 97, 76

Conread position: 41-449
Cow position:
Alignm length: 409
Alignm identity: 260
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 41-455
Cow position:
Alignm length: 416
Alignm identity: 259
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 235, 246

Conread position: 42-456
Cow position:
Alignm length: 419
Alignm identity: 255
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 136, 150

Conread position: 42-464
Cow position:
Alignm length: 423
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 43-428
Cow position:
Alignm length: 387
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 238

Conread position: 43-441
Cow position:
Alignm length: 403
Alignm identity: 249
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 69

Conread position: 43-442
Cow position:
Alignm length: 401
Alignm identity: 256
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 169, 162

Conread position: 43-453
Cow position:
Alignm length: 413
Alignm identity: 257
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 255, 263

Conread position: 43-464
Cow position:
Alignm length: 423
Alignm identity: 267
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 64, 76

Conread position: 43-464
Cow position:
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 49-451
Cow position:
Alignm length: 405
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 310

Conread position: 50-450
Cow position:
Alignm length: 405
Alignm identity: 256
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 65

Conread position: 51-438
Cow position:
Alignm length: 390
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 71

Conread position: 52-449
Cow position:
Alignm length: 398
Alignm identity: 249
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 53-398
Cow position:
Alignm length: 349
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 62

Conread position: 53-441
Cow position:
Alignm length: 391
Alignm identity: 243
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 66, 55

Conread position: 53-449
Cow position:
Alignm length: 400
Alignm identity: 249
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 228, 243

Conread position: 53-449
Cow position:
Alignm length: 398
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 69, 75

Conread position: 53-455
Cow position:
Alignm length: 403
Alignm identity: 251
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 53-455
Cow position:
Alignm length: 406
Alignm identity: 246
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 85

Conread position: 55-440
Cow position:
Alignm length: 388
Alignm identity: 238
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 74, 60

Conread position: 55-440
Cow position:
Alignm length: 387
Alignm identity: 227
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 158, 144

Conread position: 55-440
Cow position:
Alignm length: 387
Alignm identity: 237
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 51

Conread position: 55-455
Cow position:
Alignm length: 401
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 61-439
Cow position:
Alignm length: 380
Alignm identity: 234
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 218, 214

Conread position: 61-464
Cow position:
Alignm length: 404
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 61-464
Cow position:
Alignm length: 405
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 85-455
Cow position:
Alignm length: 372
Alignm identity: 232
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 64, 75

Conread position: 118-446
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 110

Conread position: 118-464
Cow position:
Alignm length: 348
Alignm identity: 219
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 94, 62

Conread position: 118-464
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 174, 157

Conread position: 129-464
Cow position:
Alignm length: 336
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 135-451
Cow position:
Alignm length: 320
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 53

Conread position: 137-423
Cow position:
Alignm length: 288
Alignm identity: 180
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 83, 99

Conread position: 143-440
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 207-437
Cow position:
Alignm length: 231
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 221-458
Cow position:
Alignm length: 238
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 227-455
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 52

Conread position: 300-464
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 63

Show alignments to all cow chromosomes.