Cow genome map

Conread name: Utr2-C0001808_O02

Conread position: 1-327
Cow position:
Alignm length: 329
Alignm identity: 212
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 119, 110

Conread position: 1-393
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 373

Conread position: 1-422
Cow position:
Alignm length: 426
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 1-423
Cow position:
Alignm length: 425
Alignm identity: 266
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 374, 60

Conread position: 1-425
Cow position:
Alignm length: 425
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-431
Cow position:
Alignm length: 431
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-431
Cow position:
Alignm length: 434
Alignm identity: 277
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 206, 196

Conread position: 1-431
Cow position:
Alignm length: 432
Alignm identity: 272
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 122

Conread position: 1-437
Cow position:
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 0

Conread position: 1-437
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 220

Conread position: 1-437
Cow position:
Alignm length: 439
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 295

Conread position: 1-438
Cow position:
Alignm length: 440
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 356

Conread position: 1-439
Cow position:
Alignm length: 446
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 105

Conread position: 1-439
Cow position:
Alignm length: 443
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 109

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 184

Conread position: 1-440
Cow position:
Alignm length: 441
Alignm identity: 274
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 379, 38

Conread position: 1-440
Cow position:
Alignm length: 442
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 198

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 282
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 157, 144

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 201

Conread position: 1-440
Cow position:
Alignm length: 441
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 199

Conread position: 1-440
Cow position:
Alignm length: 440
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 279
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 113, 118

Conread position: 1-441
Cow position:
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-441
Cow position:
Alignm length: 444
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 109

Conread position: 1-441
Cow position:
Alignm length: 444
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 80

Conread position: 1-443
Cow position:
Alignm length: 445
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 122

Conread position: 1-449
Cow position:
Alignm length: 451
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 121

Conread position: 1-450
Cow position:
Alignm length: 454
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 115

Conread position: 1-455
Cow position:
Alignm length: 458
Alignm identity: 291
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 113, 118

Conread position: 1-455
Cow position:
Alignm length: 455
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-460
Cow position:
Alignm length: 461
Alignm identity: 288
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 43, 31

Conread position: 1-462
Cow position:
Alignm length: 465
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 369

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-464
Cow position:
Alignm length: 467
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 158

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-464
Cow position:
Alignm length: 467
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 223

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-464
Cow position:
Alignm length: 466
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 112

Conread position: 1-464
Cow position:
Alignm length: 465
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 370

Conread position: 1-464
Cow position:
Alignm length: 464
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 0

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 111, 115

Conread position: 3-439
Cow position:
Alignm length: 438
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 366

Conread position: 3-440
Cow position:
Alignm length: 440
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 196

Conread position: 4-309
Cow position:
Alignm length: 306
Alignm identity: 194
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 4-405
Cow position:
Alignm length: 404
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 116, 108

Conread position: 8-398
Cow position:
Alignm length: 394
Alignm identity: 256
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 93

Conread position: 26-322
Cow position:
Alignm length: 297
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 27-441
Cow position:
Alignm length: 416
Alignm identity: 267
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 400, 407

Conread position: 32-439
Cow position:
Alignm length: 409
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 169

Conread position: 33-464
Cow position:
Alignm length: 433
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 170

Conread position: 41-405
Cow position:
Alignm length: 365
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 349, 0

Conread position: 41-439
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 77

Conread position: 41-455
Cow position:
Alignm length: 416
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 327

Conread position: 42-439
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 77

Conread position: 42-440
Cow position:
Alignm length: 400
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 74

Conread position: 42-442
Cow position:
Alignm length: 401
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 43-438
Cow position:
Alignm length: 399
Alignm identity: 262
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 77

Conread position: 43-440
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 76

Conread position: 43-440
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 319

Conread position: 43-453
Cow position:
Alignm length: 414
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 80

Conread position: 48-440
Cow position:
Alignm length: 398
Alignm identity: 255
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 71

Conread position: 51-440
Cow position:
Alignm length: 390
Alignm identity: 247
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 136, 0

Conread position: 51-455
Cow position:
Alignm length: 408
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 68, 54

Conread position: 52-438
Cow position:
Alignm length: 388
Alignm identity: 250
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 151

Conread position: 55-440
Cow position:
Alignm length: 390
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 75

Conread position: 55-442
Cow position:
Alignm length: 390
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 156, 140

Conread position: 59-458
Cow position:
Alignm length: 400
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 0

Conread position: 61-440
Cow position:
Alignm length: 380
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 64-441
Cow position:
Alignm length: 379
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 202

Conread position: 81-455
Cow position:
Alignm length: 377
Alignm identity: 241
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 122

Conread position: 85-444
Cow position:
Alignm length: 361
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 65, 57

Conread position: 139-443
Cow position:
Alignm length: 309
Alignm identity: 199
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 61

Conread position: 151-455
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 205-464
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 211-464
Cow position:
Alignm length: 254
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 223-455
Cow position:
Alignm length: 234
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 153, 139

Conread position: 223-464
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.