Cow genome map

Conread name: Utr2-C0001808_O02

Conread position: 1-237
Cow position:
Alignm length: 237
Alignm identity: 151
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-240
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 117, 107

Conread position: 1-317
Cow position:
Alignm length: 317
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-321
Cow position:
Alignm length: 323
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 31

Conread position: 1-325
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-325
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-385
Cow position:
Alignm length: 387
Alignm identity: 243
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 107, 118

Conread position: 1-401
Cow position:
Alignm length: 407
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 108

Conread position: 1-403
Cow position:
Alignm length: 403
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-404
Cow position:
Alignm length: 405
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 198

Conread position: 1-404
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-407
Cow position:
Alignm length: 409
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 200

Conread position: 1-426
Cow position:
Alignm length: 428
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 111

Conread position: 1-428
Cow position:
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 1-431
Cow position:
Alignm length: 432
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 202

Conread position: 1-431
Cow position:
Alignm length: 434
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 37

Conread position: 1-431
Cow position:
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 399

Conread position: 1-437
Cow position:
Alignm length: 438
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 369

Conread position: 1-437
Cow position:
Alignm length: 437
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-438
Cow position:
Alignm length: 439
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 369

Conread position: 1-438
Cow position:
Alignm length: 438
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-439
Cow position:
Alignm length: 440
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 206

Conread position: 1-439
Cow position:
Alignm length: 439
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-439
Cow position:
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 188

Conread position: 1-439
Cow position:
Alignm length: 440
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 177

Conread position: 1-439
Cow position:
Alignm length: 445
Alignm identity: 276
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 132, 117

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 108

Conread position: 1-440
Cow position:
Alignm length: 442
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 118

Conread position: 1-440
Cow position:
Alignm length: 443
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 187

Conread position: 1-440
Cow position:
Alignm length: 442
Alignm identity: 273
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 286, 277

Conread position: 1-442
Cow position:
Alignm length: 442
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-442
Cow position:
Alignm length: 445
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 106

Conread position: 1-442
Cow position:
Alignm length: 445
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 107

Conread position: 1-442
Cow position:
Alignm length: 444
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 115

Conread position: 1-442
Cow position:
Alignm length: 443
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 356

Conread position: 1-442
Cow position:
Alignm length: 444
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 264

Conread position: 1-442
Cow position:
Alignm length: 442
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-442
Cow position:
Alignm length: 444
Alignm identity: 281
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 202, 183

Conread position: 1-444
Cow position:
Alignm length: 448
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 108

Conread position: 1-444
Cow position:
Alignm length: 450
Alignm identity: 279
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 32

Conread position: 1-449
Cow position:
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-450
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 281

Conread position: 1-450
Cow position:
Alignm length: 450
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-452
Cow position:
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 202

Conread position: 1-455
Cow position:
Alignm length: 458
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 370

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 206

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 111

Conread position: 1-455
Cow position:
Alignm length: 458
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 37

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 275

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 265

Conread position: 1-456
Cow position:
Alignm length: 459
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 205

Conread position: 1-460
Cow position:
Alignm length: 460
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-464
Cow position:
Alignm length: 466
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 121

Conread position: 1-464
Cow position:
Alignm length: 466
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 195

Conread position: 1-464
Cow position:
Alignm length: 465
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 107

Conread position: 1-464
Cow position:
Alignm length: 465
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 199

Conread position: 1-464
Cow position:
Alignm length: 466
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 182

Conread position: 1-464
Cow position:
Alignm length: 466
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 111

Conread position: 2-439
Cow position:
Alignm length: 441
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 104

Conread position: 2-449
Cow position:
Alignm length: 448
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-456
Cow position:
Alignm length: 456
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 181

Conread position: 3-404
Cow position:
Alignm length: 405
Alignm identity: 244
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 124

Conread position: 3-437
Cow position:
Alignm length: 439
Alignm identity: 277
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 26

Conread position: 3-439
Cow position:
Alignm length: 437
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-320
Cow position:
Alignm length: 319
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 258, 264

Conread position: 4-439
Cow position:
Alignm length: 438
Alignm identity: 275
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 214, 210

Conread position: 4-439
Cow position:
Alignm length: 437
Alignm identity: 268
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 111

Conread position: 4-443
Cow position:
Alignm length: 442
Alignm identity: 260
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 115

Conread position: 4-455
Cow position:
Alignm length: 469
Alignm identity: 277
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 163, 0

Conread position: 4-455
Cow position:
Alignm length: 453
Alignm identity: 281
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 214, 210

Conread position: 4-464
Cow position:
Alignm length: 462
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 365

Conread position: 27-437
Cow position:
Alignm length: 413
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 90

Conread position: 27-455
Cow position:
Alignm length: 429
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-455
Cow position:
Alignm length: 429
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 28-441
Cow position:
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 92

Conread position: 28-464
Cow position:
Alignm length: 442
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 91

Conread position: 29-437
Cow position:
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 90

Conread position: 39-439
Cow position:
Alignm length: 418
Alignm identity: 232
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 244, 0

Conread position: 40-439
Cow position:
Alignm length: 402
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 82

Conread position: 40-455
Cow position:
Alignm length: 422
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 16

Conread position: 41-320
Cow position:
Alignm length: 280
Alignm identity: 184
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 41-405
Cow position:
Alignm length: 366
Alignm identity: 230
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 353, 0

Conread position: 42-393
Cow position:
Alignm length: 356
Alignm identity: 239
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 80, 71

Conread position: 42-437
Cow position:
Alignm length: 400
Alignm identity: 247
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 77

Conread position: 42-439
Cow position:
Alignm length: 404
Alignm identity: 257
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 77

Conread position: 42-443
Cow position:
Alignm length: 405
Alignm identity: 258
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 12, 20

Conread position: 42-444
Cow position:
Alignm length: 406
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 71

Conread position: 43-324
Cow position:
Alignm length: 283
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 154

Conread position: 43-392
Cow position:
Alignm length: 350
Alignm identity: 221
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 43-404
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 82, 72

Conread position: 43-405
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 77, 62

Conread position: 43-438
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 78

Conread position: 43-439
Cow position:
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 43-439
Cow position:
Alignm length: 398
Alignm identity: 255
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 74

Conread position: 43-444
Cow position:
Alignm length: 402
Alignm identity: 253
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 43-464
Cow position:
Alignm length: 423
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 329

Conread position: 44-464
Cow position:
Alignm length: 421
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 47-439
Cow position:
Alignm length: 395
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 57

Conread position: 47-441
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 47-464
Cow position:
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 62

Conread position: 51-447
Cow position:
Alignm length: 398
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 209

Conread position: 51-464
Cow position:
Alignm length: 414
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 52-442
Cow position:
Alignm length: 392
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 314, 323

Conread position: 53-324
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 149, 131

Conread position: 53-437
Cow position:
Alignm length: 385
Alignm identity: 248
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 55-444
Cow position:
Alignm length: 394
Alignm identity: 243
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 54

Conread position: 58-440
Cow position:
Alignm length: 384
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 322, 300

Conread position: 60-431
Cow position:
Alignm length: 374
Alignm identity: 237
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 121, 130

Conread position: 64-443
Cow position:
Alignm length: 385
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 44

Conread position: 73-433
Cow position:
Alignm length: 365
Alignm identity: 246
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 138, 129

Conread position: 73-439
Cow position:
Alignm length: 368
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 138, 126

Conread position: 73-460
Cow position:
Alignm length: 388
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 77-455
Cow position:
Alignm length: 382
Alignm identity: 246
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 42, 17

Conread position: 90-418
Cow position:
Alignm length: 332
Alignm identity: 203
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 54

Conread position: 127-440
Cow position:
Alignm length: 315
Alignm identity: 193
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 134, 148

Conread position: 128-353
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 61

Conread position: 132-443
Cow position:
Alignm length: 314
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 78

Conread position: 136-439
Cow position:
Alignm length: 305
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 250, 239

Conread position: 145-464
Cow position:
Alignm length: 320
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 161-438
Cow position:
Alignm length: 280
Alignm identity: 186
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 133, 121

Conread position: 195-436
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 167

Conread position: 195-436
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 8, 36

Conread position: 209-444
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 242-440
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 22

Show alignments to all cow chromosomes.