Cow genome map
| Conread name: | Utr2-C0001808_O02 |
| Conread position: | 1-272 |
| Cow position: | chr24:17013269-17013538 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 1-320 |
| Cow position: | chr24:17013185-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 124, 105 |
| Conread position: | 1-331 |
| Cow position: | chr24:17070732-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-333 |
| Cow position: | chr24:17035265-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 318, 0 |
| Conread position: | 1-412 |
| Cow position: | chr24:17070648-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-439 |
| Cow position: | chr24:17070480-17070918 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 262 |
| Conread position: | 1-440 |
| Cow position: | chr24:17077988-17077549 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 122 |
| Conread position: | 1-449 |
| Cow position: | chr24:17036606-17036161 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 57 |
| Conread position: | 1-449 |
| Cow position: | chr24:17077904-17077457 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 0 |
| Conread position: | 1-450 |
| Cow position: | chr24:17035685-17035236 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 262 |
| Conread position: | 1-450 |
| Cow position: | chr24:17036357-17035908 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr24:17070564-17071018 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-464 |
| Cow position: | chr24:17035937-17035474 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-458 |
| Cow position: | chr24:17078071-17077615 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 263 |
| Conread position: | 4-440 |
| Cow position: | chr24:17078237-17077801 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 371 |
| Conread position: | 4-450 |
| Cow position: | chr24:17036522-17036076 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-455 |
| Cow position: | chr24:17036102-17035651 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-464 |
| Cow position: | chr24:17078153-17077693 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 285 |
| Conread position: | 23-464 |
| Cow position: | chr24:17036419-17035978 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-440 |
| Cow position: | chr24:17035492-17035078 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 181 |
| Conread position: | 26-464 |
| Cow position: | chr24:17036248-17035810 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-417 |
| Cow position: | chr24:17035323-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 27-464 |
| Cow position: | chr24:17035995-17035558 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-464 |
| Cow position: | chr24:17035742-17035306 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-449 |
| Cow position: | chr24:17035815-17035405 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-464 |
| Cow position: | chr24:17036150-17035726 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-449 |
| Cow position: | chr24:17078365-17077960 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 46-426 |
| Cow position: | chr24:17013148-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 48-464 |
| Cow position: | chr24:17070443-17070859 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-282 |
| Cow position: | chr24:16986433-16986648 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 136, 129 |
| Conread position: | 76-464 |
| Cow position: | chr24:17036615-17036230 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 127-455 |
| Cow position: | chr24:17070438-17070766 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-464 |
| Cow position: | chr24:17078365-17078029 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-358 |
| Cow position: | chr24:16986412-16986640 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-464 |
| Cow position: | chr24:17013151-17013480 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 210-440 |
| Cow position: | chr24:17070437-17070667 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 227-455 |
| Cow position: | chr24:16986425-16986653 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 140, 117 |
Show alignments to all cow chromosomes.