Cow genome map


           Conread name:
           Utr2-C0001808_O02
        

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-348
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 53
               

               Conread position:
               1-388
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               252
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               112, 117
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               174, 205
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-405
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               379, 374
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               420, 408
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               102, 116
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               126, 112
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               107, 115
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               354, 364
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               107, 116
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               198, 89
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               124, 114
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               148, 141
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 117
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-443
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 113
               

               Conread position:
               1-450
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 116
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               340, 63
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               450, 0
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               379, 374
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 115
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               149, 143
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               365, 369
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-308
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               117, 110
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               119, 107
               

               Conread position:
               2-450
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 200
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               111, 125
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               105, 115
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-304
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 112
               

               Conread position:
               4-320
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               123, 110
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               252
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-432
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               275
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               104, 115
               

               Conread position:
               4-438
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               99, 112
               

               Conread position:
               4-441
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               4-449
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               116, 101
               

               Conread position:
               4-458
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               4-464
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               104, 115
               

               Conread position:
               27-455
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               174, 156
               

               Conread position:
               28-358
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               80, 91
               

               Conread position:
               33-455
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               273
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               150, 168
               

               Conread position:
               34-464
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               279
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               38-464
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               383, 20
               

               Conread position:
               39-436
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-464
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               165, 108
               

               Conread position:
               39-464
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               42-394
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               87, 81
               

               Conread position:
               42-432
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               338, 324
               

               Conread position:
               42-464
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 77
               

               Conread position:
               43-392
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-464
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-464
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               45-268
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               51-318
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               52-438
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               55-438
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               74, 60
               

               Conread position:
               55-439
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               158, 153
               

               Conread position:
               55-455
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               313, 298
               

               Conread position:
               56-464
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               58-437
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               120, 142
               

               Conread position:
               58-438
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               59-464
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               191, 198
               

               Conread position:
               61-441
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               171, 166
               

               Conread position:
               64-393
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               115, 136
               

               Conread position:
               64-431
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 49
               

               Conread position:
               64-438
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 49
               

               Conread position:
               64-440
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 310
               

               Conread position:
               65-458
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               314, 308
               

               Conread position:
               66-438
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               205, 215
               

               Conread position:
               67-440
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               41, 48
               

               Conread position:
               78-439
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               88-406
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 36
               

               Conread position:
               115-360
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               142-455
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               40, 48
               

               Conread position:
               149-464
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               175-455
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               121, 24
               

               Conread position:
               202-455
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               202-464
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-428
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               220-451
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               225-464
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               217, 229
               

               Conread position:
               233-455
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.