Cow genome map


           Conread name:
           Utr2-C0001808_O02
        

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               270, 280
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               120, 96
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 106
               

               Conread position:
               1-407
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               313, 0
               

               Conread position:
               1-416
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               139, 121
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-425
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 370
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               288
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               194, 98
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 264
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 294
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 93
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               297
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               117, 99
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               294
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               278, 84
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 115
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 106
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               116, 104
               

               Conread position:
               3-440
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 355
               

               Conread position:
               4-426
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               124, 109
               

               Conread position:
               4-431
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 60
               

               Conread position:
               4-431
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               269
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               425, 0
               

               Conread position:
               4-439
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 367
               

               Conread position:
               4-440
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 110
               

               Conread position:
               4-455
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               117, 110
               

               Conread position:
               4-455
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               4-455
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               125, 111
               

               Conread position:
               26-455
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               151, 178
               

               Conread position:
               27-455
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 18
               

               Conread position:
               28-441
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               335, 200
               

               Conread position:
               28-464
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               284
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               243, 155
               

               Conread position:
               39-438
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               41-437
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               67, 87
               

               Conread position:
               41-455
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               146, 107
               

               Conread position:
               42-441
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               43-394
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               43-424
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               68, 64
               

               Conread position:
               43-451
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               43-455
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               45-444
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 158
               

               Conread position:
               45-456
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               177, 161
               

               Conread position:
               47-455
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               61-406
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               64-464
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               127, 139
               

               Conread position:
               66-464
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               213, 194
               

               Conread position:
               73-441
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               109, 138
               

               Conread position:
               118-464
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               127-455
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               151-464
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-441
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 139
               
Show alignments to all cow chromosomes.