Cow genome map
| Conread name: | Utr2-C0001808_O02 |
| Conread position: | 1-145 |
| Cow position: | chr3:16020358-16020214 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-228 |
| Cow position: | chr3:62721800-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-263 |
| Cow position: | chr3:62743197-62743459 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 115 |
| Conread position: | 1-394 |
| Cow position: | chr3:68045958-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 174, 199 |
| Conread position: | 1-395 |
| Cow position: | chr3:62721968-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 113, 118 |
| Conread position: | 1-404 |
| Cow position: | chr3:62743034-62743432 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 121, 82 |
| Conread position: | 1-437 |
| Cow position: | chr3:62742383-62742814 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 157, 143 |
| Conread position: | 1-439 |
| Cow position: | chr3:62742883-62743299 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-440 |
| Cow position: | chr3:68027113-68027552 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 119 |
| Conread position: | 1-440 |
| Cow position: | chr3:68045706-68046145 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 117 |
| Conread position: | 1-440 |
| Cow position: | chr3:68045790-68046229 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 112 |
| Conread position: | 1-460 |
| Cow position: | chr3:62722136-62721677 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 369 |
| Conread position: | 1-464 |
| Cow position: | chr3:62722052-62721589 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 111 |
| Conread position: | 1-464 |
| Cow position: | chr3:62722220-62721757 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 358 |
| Conread position: | 1-464 |
| Cow position: | chr3:62722304-62721841 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-464 |
| Cow position: | chr3:62742798-62743240 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 86, 208 |
| Conread position: | 1-464 |
| Cow position: | chr3:68027197-68027660 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 292 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 198, 188 |
| Conread position: | 1-464 |
| Cow position: | chr3:77351218-77350764 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 2-431 |
| Cow position: | chr3:62742552-62742977 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 89 |
| Conread position: | 2-440 |
| Cow position: | chr3:77351134-77350704 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 126, 31 |
| Conread position: | 3-450 |
| Cow position: | chr3:68027283-68027730 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 198 |
| Conread position: | 6-356 |
| Cow position: | chr3:62743118-62743468 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 163, 194 |
| Conread position: | 27-408 |
| Cow position: | chr3:62742658-62743033 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 228, 91 |
| Conread position: | 33-441 |
| Cow position: | chr3:68045654-68046062 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 39-229 |
| Cow position: | chr3:16020404-16020214 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 85 |
| Conread position: | 40-441 |
| Cow position: | chr3:62742339-62742736 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 41-309 |
| Cow position: | chr3:77350851-77350586 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 41-464 |
| Cow position: | chr3:62742256-62742675 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 42-440 |
| Cow position: | chr3:68027072-68027468 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 43-440 |
| Cow position: | chr3:68045916-68046313 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 55-354 |
| Cow position: | chr3:16020465-16020177 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 218, 55 |
| Conread position: | 56-437 |
| Cow position: | chr3:68027000-68027381 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 146 |
| Conread position: | 66-451 |
| Cow position: | chr3:62722323-62721938 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-440 |
| Cow position: | chr3:68045605-68045977 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 124, 7 |
| Conread position: | 139-440 |
| Cow position: | chr3:68045594-68045893 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 140-441 |
| Cow position: | chr3:68027000-68027301 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 108, 103 |
| Conread position: | 202-392 |
| Cow position: | chr3:16020409-16020219 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 90 |
| Conread position: | 207-464 |
| Cow position: | chr3:62742254-62742510 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 81 |
| Conread position: | 234-455 |
| Cow position: | chr3:62722323-62722102 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.