Cow genome map


           Conread name:
           Utr2-C0001808_O02
        

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               278, 264
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               211, 193
               

               Conread position:
               1-354
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               253, 0
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               365, 369
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               289
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 201
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 202
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 117
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 117
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               109, 117
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 266
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               197, 104
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               370, 350
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               198, 191
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               127, 109
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               127, 118
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 116
               

               Conread position:
               1-443
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               103, 127
               

               Conread position:
               1-443
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               1-443
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               289
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               1-443
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 202
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 107
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 118
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 304
               

               Conread position:
               2-441
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               112, 116
               

               Conread position:
               2-442
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               43, 25
               

               Conread position:
               2-444
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 108
               

               Conread position:
               3-440
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 116
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 199
               

               Conread position:
               4-400
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               390, 0
               

               Conread position:
               4-410
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               110, 114
               

               Conread position:
               4-439
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               368, 355
               

               Conread position:
               4-440
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-442
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               4-443
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               4-455
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               398, 415
               

               Conread position:
               4-459
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 199
               

               Conread position:
               27-441
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               101, 84
               

               Conread position:
               27-441
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               28-440
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               268
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               28-440
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               175, 163
               

               Conread position:
               33-442
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 159
               

               Conread position:
               38-438
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               70, 82
               

               Conread position:
               38-440
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-392
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               69, 79
               

               Conread position:
               40-442
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               243, 256
               

               Conread position:
               42-424
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               72, 77
               

               Conread position:
               42-437
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               260
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               242, 102
               

               Conread position:
               42-438
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 74
               

               Conread position:
               42-443
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               42-450
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               42-456
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 78
               

               Conread position:
               43-328
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               71, 85
               

               Conread position:
               43-437
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 182
               

               Conread position:
               43-444
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 153
               

               Conread position:
               44-443
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 18
               

               Conread position:
               47-439
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               61-442
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 136
               

               Conread position:
               64-438
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               66-443
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 51
               

               Conread position:
               88-428
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               127-358
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               71, 84
               

               Conread position:
               144-443
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               75, 81
               

               Conread position:
               153-455
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 58
               

               Conread position:
               156-464
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               228-444
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               127, 152
               
Show alignments to all cow chromosomes.