Cow genome map
| Conread name: | Utr2-C0001808_O02 |
| Conread position: | 1-387 |
| Cow position: | chr8:46816990-46817376 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 370, 356 |
| Conread position: | 1-427 |
| Cow position: | chr8:48406685-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 1-431 |
| Cow position: | chr8:6958059-6957630 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 284 |
| Conread position: | 1-437 |
| Cow position: | chr8:46816570-46817006 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-437 |
| Cow position: | chr8:46816906-46817343 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 50 |
| Conread position: | 1-438 |
| Cow position: | chr8:46816234-46816671 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 370 |
| Conread position: | 1-439 |
| Cow position: | chr8:46816318-46816756 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-439 |
| Cow position: | chr8:46816654-46817092 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 307 |
| Conread position: | 1-441 |
| Cow position: | chr8:48407105-48406665 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 188 |
| Conread position: | 1-450 |
| Cow position: | chr8:55581095-55581544 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 118 |
| Conread position: | 1-455 |
| Cow position: | chr8:45201375-45201829 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr8:46816066-46816520 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-456 |
| Cow position: | chr8:46816150-46816605 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 356 |
| Conread position: | 1-464 |
| Cow position: | chr8:45200955-45201418 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-464 |
| Cow position: | chr8:46816402-46816865 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 202 |
| Conread position: | 1-464 |
| Cow position: | chr8:46816822-46817285 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 202 |
| Conread position: | 1-464 |
| Cow position: | chr8:48406853-48406390 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 125 |
| Conread position: | 1-464 |
| Cow position: | chr8:48407021-48406558 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-464 |
| Cow position: | chr8:48407273-48406810 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 200 |
| Conread position: | 1-464 |
| Cow position: | chr8:48407609-48407146 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 2-440 |
| Cow position: | chr8:55580844-55581282 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 117 |
| Conread position: | 2-464 |
| Cow position: | chr8:55580760-55581222 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 293 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 196, 201 |
| Conread position: | 4-431 |
| Cow position: | chr8:45201546-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 258, 263 |
| Conread position: | 4-464 |
| Cow position: | chr8:48407438-48406978 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 365 |
| Conread position: | 4-464 |
| Cow position: | chr8:55581182-55581642 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 192 |
| Conread position: | 28-464 |
| Cow position: | chr8:45201318-45201754 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-464 |
| Cow position: | chr8:46816009-46816445 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 253 |
| Conread position: | 30-441 |
| Cow position: | chr8:48407328-48406917 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 159 |
| Conread position: | 34-423 |
| Cow position: | chr8:48407156-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 83 |
| Conread position: | 39-438 |
| Cow position: | chr8:55581049-55581448 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 79 |
| Conread position: | 42-455 |
| Cow position: | chr8:45201500-45201913 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 223 |
| Conread position: | 42-464 |
| Cow position: | chr8:46816779-46817201 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 43-393 |
| Cow position: | chr8:55581389-55581739 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 155, 160 |
| Conread position: | 43-440 |
| Cow position: | chr8:45200913-45201310 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 234, 222 |
| Conread position: | 56-464 |
| Cow position: | chr8:48407638-48407230 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 150 |
| Conread position: | 64-464 |
| Cow position: | chr8:48406706-48406306 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 125 |
| Conread position: | 84-432 |
| Cow position: | chr8:6958060-6957713 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 0 |
| Conread position: | 171-437 |
| Cow position: | chr8:6958057-6957791 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 253-443 |
| Cow position: | chr8:6958059-6957869 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.