Cow genome map

Conread name: Utr2-C0001808_O10

Conread position: 1-183
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-341
Cow position:
Alignm length: 342
Alignm identity: 216
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 128, 120

Conread position: 1-346
Cow position:
Alignm length: 346
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-369
Cow position:
Alignm length: 370
Alignm identity: 244
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 301, 314

Conread position: 1-424
Cow position:
Alignm length: 424
Alignm identity: 250
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 410, 0

Conread position: 1-439
Cow position:
Alignm length: 441
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 120

Conread position: 1-445
Cow position:
Alignm length: 447
Alignm identity: 274
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 108, 103

Conread position: 1-448
Cow position:
Alignm length: 450
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 49

Conread position: 1-451
Cow position:
Alignm length: 452
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 376

Conread position: 1-454
Cow position:
Alignm length: 454
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-454
Cow position:
Alignm length: 456
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 138

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 275
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 142, 121

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 408

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 391

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 408

Conread position: 1-455
Cow position:
Alignm length: 455
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 408

Conread position: 1-455
Cow position:
Alignm length: 458
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 120

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 408

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 304

Conread position: 1-455
Cow position:
Alignm length: 457
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 121

Conread position: 1-455
Cow position:
Alignm length: 457
Alignm identity: 282
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 147, 134

Conread position: 1-455
Cow position:
Alignm length: 455
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 412

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 120

Conread position: 3-267
Cow position:
Alignm length: 265
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-339
Cow position:
Alignm length: 337
Alignm identity: 204
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-346
Cow position:
Alignm length: 346
Alignm identity: 218
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 41, 51

Conread position: 3-349
Cow position:
Alignm length: 348
Alignm identity: 219
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 126, 118

Conread position: 3-356
Cow position:
Alignm length: 356
Alignm identity: 228
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 41, 51

Conread position: 3-413
Cow position:
Alignm length: 412
Alignm identity: 252
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 358, 353

Conread position: 3-423
Cow position:
Alignm length: 423
Alignm identity: 260
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 408, 396

Conread position: 3-425
Cow position:
Alignm length: 423
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-428
Cow position:
Alignm length: 427
Alignm identity: 254
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 421, 0

Conread position: 3-430
Cow position:
Alignm length: 428
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-431
Cow position:
Alignm length: 430
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 193

Conread position: 3-432
Cow position:
Alignm length: 433
Alignm identity: 277
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 130, 119

Conread position: 3-435
Cow position:
Alignm length: 434
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 124

Conread position: 3-436
Cow position:
Alignm length: 434
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-439
Cow position:
Alignm length: 438
Alignm identity: 273
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 134, 143

Conread position: 3-439
Cow position:
Alignm length: 438
Alignm identity: 263
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 223, 227

Conread position: 3-445
Cow position:
Alignm length: 445
Alignm identity: 283
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 60

Conread position: 3-445
Cow position:
Alignm length: 444
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 397

Conread position: 3-445
Cow position:
Alignm length: 443
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-445
Cow position:
Alignm length: 444
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 367

Conread position: 3-445
Cow position:
Alignm length: 445
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 269

Conread position: 3-445
Cow position:
Alignm length: 445
Alignm identity: 280
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 406, 390

Conread position: 3-445
Cow position:
Alignm length: 445
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 227

Conread position: 3-445
Cow position:
Alignm length: 445
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 227

Conread position: 3-445
Cow position:
Alignm length: 445
Alignm identity: 275
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 309, 321

Conread position: 3-446
Cow position:
Alignm length: 444
Alignm identity: 261
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-447
Cow position:
Alignm length: 445
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-449
Cow position:
Alignm length: 448
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 69

Conread position: 3-450
Cow position:
Alignm length: 449
Alignm identity: 260
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 219, 238

Conread position: 3-454
Cow position:
Alignm length: 453
Alignm identity: 270
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 117

Conread position: 3-454
Cow position:
Alignm length: 452
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-454
Cow position:
Alignm length: 454
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 198

Conread position: 3-454
Cow position:
Alignm length: 455
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 71

Conread position: 3-455
Cow position:
Alignm length: 456
Alignm identity: 286
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 13, 249

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 276
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 80

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 270
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 313, 305

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 277
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 137, 119

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 287

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 279
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 455
Alignm identity: 286
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 130, 41

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 374

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 276
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 265, 0

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 259
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 374

Conread position: 3-455
Cow position:
Alignm length: 455
Alignm identity: 287
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 406, 394

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 234

Conread position: 3-455
Cow position:
Alignm length: 456
Alignm identity: 288
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 66

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 457
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 69

Conread position: 3-455
Cow position:
Alignm length: 456
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 234

Conread position: 3-455
Cow position:
Alignm length: 455
Alignm identity: 288
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 226, 234

Conread position: 3-455
Cow position:
Alignm length: 453
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position:
Alignm length: 455
Alignm identity: 278
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 132, 143

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 276
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 192, 199

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 285
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 132, 44

Conread position: 3-455
Cow position:
Alignm length: 454
Alignm identity: 280
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 309, 321

Conread position: 4-455
Cow position:
Alignm length: 454
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 269

Conread position: 5-439
Cow position:
Alignm length: 437
Alignm identity: 279
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 142, 132

Conread position: 5-454
Cow position:
Alignm length: 453
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 68

Conread position: 6-433
Cow position:
Alignm length: 429
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 391

Conread position: 6-443
Cow position:
Alignm length: 441
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 140

Conread position: 6-445
Cow position:
Alignm length: 443
Alignm identity: 281
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 128, 140

Conread position: 6-446
Cow position:
Alignm length: 442
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 98

Conread position: 6-451
Cow position:
Alignm length: 449
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 46

Conread position: 6-454
Cow position:
Alignm length: 449
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-454
Cow position:
Alignm length: 449
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-455
Cow position:
Alignm length: 450
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-455
Cow position:
Alignm length: 450
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-455
Cow position:
Alignm length: 452
Alignm identity: 283
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 134, 116

Conread position: 6-455
Cow position:
Alignm length: 452
Alignm identity: 284
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 124, 116

Conread position: 6-455
Cow position:
Alignm length: 456
Alignm identity: 289
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 61, 44

Conread position: 6-455
Cow position:
Alignm length: 452
Alignm identity: 272
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 189, 195

Conread position: 6-455
Cow position:
Alignm length: 451
Alignm identity: 276
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 131, 137

Conread position: 8-455
Cow position:
Alignm length: 448
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-300
Cow position:
Alignm length: 292
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-436
Cow position:
Alignm length: 429
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 268

Conread position: 9-446
Cow position:
Alignm length: 438
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-453
Cow position:
Alignm length: 446
Alignm identity: 280
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 209, 85

Conread position: 9-455
Cow position:
Alignm length: 447
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-455
Cow position:
Alignm length: 449
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 138

Conread position: 9-455
Cow position:
Alignm length: 448
Alignm identity: 283
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 124, 113

Conread position: 9-455
Cow position:
Alignm length: 449
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 195

Conread position: 9-455
Cow position:
Alignm length: 449
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 195

Conread position: 10-432
Cow position:
Alignm length: 423
Alignm identity: 270
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 275, 0

Conread position: 10-455
Cow position:
Alignm length: 448
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 64

Conread position: 10-455
Cow position:
Alignm length: 448
Alignm identity: 284
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 223, 229

Conread position: 11-451
Cow position:
Alignm length: 444
Alignm identity: 284
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 261, 307

Conread position: 11-455
Cow position:
Alignm length: 451
Alignm identity: 276
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 40

Conread position: 11-455
Cow position:
Alignm length: 446
Alignm identity: 276
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 119, 111

Conread position: 18-454
Cow position:
Alignm length: 438
Alignm identity: 273
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 86

Conread position: 18-455
Cow position:
Alignm length: 438
Alignm identity: 264
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 22-454
Cow position:
Alignm length: 433
Alignm identity: 260
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 24-455
Cow position:
Alignm length: 437
Alignm identity: 280
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 90

Conread position: 39-455
Cow position:
Alignm length: 417
Alignm identity: 253
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 63-455
Cow position:
Alignm length: 395
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 162, 141

Conread position: 63-455
Cow position:
Alignm length: 396
Alignm identity: 254
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 88, 95

Conread position: 68-454
Cow position:
Alignm length: 387
Alignm identity: 240
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 72-454
Cow position:
Alignm length: 386
Alignm identity: 244
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 37, 32

Conread position: 72-455
Cow position:
Alignm length: 384
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 74-455
Cow position:
Alignm length: 382
Alignm identity: 237
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 80-455
Cow position:
Alignm length: 377
Alignm identity: 246
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 150, 158

Conread position: 81-455
Cow position:
Alignm length: 380
Alignm identity: 234
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 64

Conread position: 83-454
Cow position:
Alignm length: 372
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 89-454
Cow position:
Alignm length: 366
Alignm identity: 222
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 90-454
Cow position:
Alignm length: 366
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 50

Conread position: 140-454
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 145-454
Cow position:
Alignm length: 310
Alignm identity: 200
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 155-454
Cow position:
Alignm length: 301
Alignm identity: 189
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 157, 162

Conread position: 162-433
Cow position:
Alignm length: 274
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 26

Conread position: 168-454
Cow position:
Alignm length: 288
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 196, 201

Conread position: 256-455
Cow position:
Alignm length: 201
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 116, 130

Show alignments to all cow chromosomes.