Cow genome map
| Conread name: | Utr2-C0001808_O10 |
| Conread position: | 1-183 |
| Cow position: | chr24:17013324-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-263 |
| Cow position: | chr24:17035210-17034948 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 132, 121 |
| Conread position: | 1-389 |
| Cow position: | chr24:17077849-17077462 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 121 |
| Conread position: | 1-435 |
| Cow position: | chr24:17070619-17071053 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-454 |
| Cow position: | chr24:17036218-17035765 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 121 |
| Conread position: | 1-454 |
| Cow position: | chr24:17078101-17077648 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr24:17035714-17035260 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr24:17036302-17035848 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr24:17036470-17036016 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr24:17070535-17070989 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 120 |
| Conread position: | 3-426 |
| Cow position: | chr24:17077931-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 119 |
| Conread position: | 3-439 |
| Cow position: | chr24:17035628-17035192 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 295 |
| Conread position: | 3-445 |
| Cow position: | chr24:17035376-17034935 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 300 |
| Conread position: | 3-445 |
| Cow position: | chr24:17035880-17035438 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 49 |
| Conread position: | 3-454 |
| Cow position: | chr24:17035796-17035345 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 270 |
| Conread position: | 3-454 |
| Cow position: | chr24:17035964-17035513 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-454 |
| Cow position: | chr24:17078015-17077564 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-455 |
| Cow position: | chr24:17035544-17035092 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-455 |
| Cow position: | chr24:17036048-17035596 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-455 |
| Cow position: | chr24:17036132-17035680 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 301 |
| Conread position: | 3-455 |
| Cow position: | chr24:17036384-17035932 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-264 |
| Cow position: | chr24:17013245-17013503 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 123, 115 |
| Conread position: | 6-436 |
| Cow position: | chr24:17035457-17035027 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 381 |
| Conread position: | 9-455 |
| Cow position: | chr24:17036546-17036100 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-351 |
| Cow position: | chr24:17013165-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-455 |
| Cow position: | chr24:17070462-17070905 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 376 |
| Conread position: | 21-455 |
| Cow position: | chr24:17070387-17070821 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-232 |
| Cow position: | chr24:16986445-16986653 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-455 |
| Cow position: | chr24:17078153-17077731 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-318 |
| Cow position: | chr24:16986428-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 151-455 |
| Cow position: | chr24:17013139-17013442 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 226-455 |
| Cow position: | chr24:17036578-17036352 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 285-455 |
| Cow position: | chr24:16986454-16986624 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 102 |
Show alignments to all cow chromosomes.