Cow genome map


           Conread name:
           Utr2-C0001808_O10
        

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               231, 236
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               330, 26
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               280
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               161, 168
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               221, 229
               

               Conread position:
               1-454
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               304, 313
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 120
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 120
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 304
               

               Conread position:
               3-183
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-235
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               3-254
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 70
               

               Conread position:
               3-259
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               3-349
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               225, 233
               

               Conread position:
               3-403
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               338, 0
               

               Conread position:
               3-406
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 119
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               309, 313
               

               Conread position:
               3-423
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-434
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               378, 369
               

               Conread position:
               3-434
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               276
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               305, 297
               

               Conread position:
               3-444
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               280, 6
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               219, 227
               

               Conread position:
               3-449
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               319, 0
               

               Conread position:
               3-454
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-454
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 293
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               375, 386
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               399, 405
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 141
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               284
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               126, 118
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               214, 16
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 118
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               274, 216
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               401, 406
               

               Conread position:
               3-455
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               379, 374
               

               Conread position:
               4-422
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               388, 383
               

               Conread position:
               4-455
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-455
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               377, 372
               

               Conread position:
               6-337
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-454
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               271, 41
               

               Conread position:
               6-455
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 166
               

               Conread position:
               6-455
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               272
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               104, 82
               

               Conread position:
               7-455
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 116
               

               Conread position:
               8-448
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               301
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               9-305
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               109, 102
               

               Conread position:
               9-332
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-361
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               120, 81
               

               Conread position:
               9-423
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               120, 112
               

               Conread position:
               9-423
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-436
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               394, 297
               

               Conread position:
               9-439
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-439
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               273, 287
               

               Conread position:
               9-455
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-455
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               75, 66
               

               Conread position:
               9-455
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               331, 353
               

               Conread position:
               9-455
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               10-262
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               223, 228
               

               Conread position:
               10-354
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               11-455
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-455
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               12-455
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               233, 253
               

               Conread position:
               15-431
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               270
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               123, 13
               

               Conread position:
               21-454
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               22-455
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 101
               

               Conread position:
               23-455
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-281
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               106, 97
               

               Conread position:
               25-455
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               28-455
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               29-455
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-455
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               78, 69
               

               Conread position:
               53-455
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-455
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               55-454
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               56-297
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-454
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               193, 197
               

               Conread position:
               57-405
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               141, 179
               

               Conread position:
               64-451
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               69, 58
               

               Conread position:
               72-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               84-438
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               86-433
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               306, 291
               

               Conread position:
               92-421
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-454
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               185, 181
               

               Conread position:
               93-454
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 53
               

               Conread position:
               111-361
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               137-449
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               139-455
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 70
               

               Conread position:
               144-454
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 119
               

               Conread position:
               156-455
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               195-455
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-455
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               219-445
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               220-454
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.