Cow genome map

Conread name: Utr2-C0001808_O10

Conread position: 1-181
Cow position: chr25:33299647-33299827 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-242
Cow position: chr25:34769460-34769219 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 231, 236

Conread position: 1-248
Cow position: chr25:34732028-34731781 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-337
Cow position: chr25:23420543-23420879 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-423
Cow position: chr25:33299395-33299817 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 51

Conread position: 1-434
Cow position: chr25:33305970-33305545 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 282
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 330, 26

Conread position: 1-434
Cow position: chr25:34447434-34447858 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 280
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 161, 168

Conread position: 1-439
Cow position: chr25:33298471-33298909 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 221, 229

Conread position: 1-454
Cow position: chr25:36800539-36800992 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 279
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 304, 313

Conread position: 1-455
Cow position: chr25:33298891-33299345 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-455
Cow position: chr25:33299143-33299597 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 120

Conread position: 1-455
Cow position: chr25:34447098-34447552 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 120

Conread position: 1-455
Cow position: chr25:34769712-34769258 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-455
Cow position: chr25:34769880-34769426 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-455
Cow position: chr25:36800875-36801329 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 304

Conread position: 3-183
Cow position: chr25:327085-327265 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-235
Cow position: chr25:18642093-18641858 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 3-254
Cow position: chr25:33145176-33145427 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 70

Conread position: 3-259
Cow position: chr25:327001-327257 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 48

Conread position: 3-349
Cow position: chr25:22235991-22236337 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 218
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 225, 233

Conread position: 3-403
Cow position: chr25:36801621-36802014 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 249
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 338, 0

Conread position: 3-406
Cow position: chr25:34769626-34769222 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 119

Conread position: 3-419
Cow position: chr25:22235907-22236324 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 262
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 309, 313

Conread position: 3-423
Cow position: chr25:34763324-34763741 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 132, 0

Conread position: 3-431
Cow position: chr25:33127796-33128224 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-434
Cow position: chr25:23420377-23420808 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 369

Conread position: 3-434
Cow position: chr25:34732614-34732183 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 276
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 305, 297

Conread position: 3-444
Cow position: chr25:33305324-33304888 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 280, 6

Conread position: 3-446
Cow position: chr25:25652434-25652877 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 269
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 219, 227

Conread position: 3-449
Cow position: chr25:326575-327027 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 276
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 319, 0

Conread position: 3-454
Cow position: chr25:25652266-25652717 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 276
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-454
Cow position: chr25:34762991-34763439 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 283
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 132, 0

Conread position: 3-455
Cow position: chr25:33157227-33156776 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 293

Conread position: 3-455
Cow position: chr25:33157311-33156859 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 386

Conread position: 3-455
Cow position: chr25:33157395-33156943 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 405

Conread position: 3-455
Cow position: chr25:33298641-33299093 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 141

Conread position: 3-455
Cow position: chr25:33298725-33299177 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 284
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 126, 118

Conread position: 3-455
Cow position: chr25:33299229-33299681 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position: chr25:33306303-33305854 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 286
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 214, 16

Conread position: 3-455
Cow position: chr25:34447184-34447636 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 118

Conread position: 3-455
Cow position: chr25:34762907-34763356 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 273
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 214, 0

Conread position: 3-455
Cow position: chr25:34763240-34763689 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 277
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 274, 216

Conread position: 3-455
Cow position: chr25:34769794-34769342 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position: chr25:34769962-34769510 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-455
Cow position: chr25:34770046-34769594 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 406

Conread position: 3-455
Cow position: chr25:36801453-36801905 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 277
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 379, 374

Conread position: 4-422
Cow position: chr25:346443-346861 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 388, 383

Conread position: 4-455
Cow position: chr25:33298810-33299261 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-455
Cow position: chr25:36801371-36801821 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 279
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 377, 372

Conread position: 6-337
Cow position: chr25:326494-326825 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 210
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 6-454
Cow position: chr25:34763078-34763520 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 270
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 271, 41

Conread position: 6-455
Cow position: chr25:33144846-33145292 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 166

Conread position: 6-455
Cow position: chr25:33157476-33157027 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-445
Cow position: chr25:34432772-34433204 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 272
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 104, 82

Conread position: 7-455
Cow position: chr25:34770127-34769678 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 8-448
Cow position: chr25:34433019-34433477 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 301
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 43

Conread position: 9-305
Cow position: chr25:18642171-18641872 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 109, 102

Conread position: 9-332
Cow position: chr25:366725-367048 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 9-361
Cow position: chr25:34433524-34433873 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 120, 81

Conread position: 9-423
Cow position: chr25:34714118-34714532 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 258
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 120, 112

Conread position: 9-423
Cow position: chr25:36801543-36801957 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-436
Cow position: chr25:34433605-34434029 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 269
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 394, 297

Conread position: 9-439
Cow position: chr25:34447274-34447704 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-439
Cow position: chr25:34762829-34763256 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 265
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 273, 287

Conread position: 9-455
Cow position: chr25:34447022-34447468 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-455
Cow position: chr25:34713950-34714396 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 270
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 66

Conread position: 9-455
Cow position: chr25:34732104-34731660 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 264
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 331, 353

Conread position: 9-455
Cow position: chr25:36800463-36800909 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 277
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 36

Conread position: 10-262
Cow position: chr25:427330-427582 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 223, 228

Conread position: 10-354
Cow position: chr25:326924-327268 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 19

Conread position: 11-455
Cow position: chr25:36800633-36801077 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-455
Cow position: chr25:22235831-22236275 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 281
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 13, 135

Conread position: 12-455
Cow position: chr25:34714037-34714480 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 270
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 233, 253

Conread position: 15-431
Cow position: chr25:33145023-33145436 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 270
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 123, 13

Conread position: 21-454
Cow position: chr25:33127645-33128079 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 63

Conread position: 22-455
Cow position: chr25:34446949-34447384 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 101

Conread position: 23-455
Cow position: chr25:33127732-33128164 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 24-281
Cow position: chr25:34433224-34433478 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 97

Conread position: 25-455
Cow position: chr25:34713714-34714144 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 265
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 26

Conread position: 28-455
Cow position: chr25:34446873-34447300 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 264
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 47, 55

Conread position: 29-455
Cow position: chr25:23420319-23420745 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 32-455
Cow position: chr25:326352-326775 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 268
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 69

Conread position: 53-455
Cow position: chr25:33157513-33157111 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 54-455
Cow position: chr25:34770163-34769762 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 55-454
Cow position: chr25:346408-346809 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 251
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 25, 9

Conread position: 56-297
Cow position: chr25:34432983-34433224 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 56-454
Cow position: chr25:36801338-36801736 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 241
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 193, 197

Conread position: 57-405
Cow position: chr25:18642207-18641857 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 141, 179

Conread position: 64-451
Cow position: chr25:34433495-34433879 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 247
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 69, 58

Conread position: 72-451
Cow position: chr25:33305421-33305049 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 84-438
Cow position: chr25:326913-327268 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 222
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 21

Conread position: 86-433
Cow position: chr25:34732615-34732268 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 306, 291

Conread position: 92-421
Cow position: chr25:366724-367053 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 92-454
Cow position: chr25:34762828-34763187 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 230
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 185, 181

Conread position: 93-454
Cow position: chr25:25652188-25652549 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 225
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 53

Conread position: 111-361
Cow position: chr25:34432954-34433204 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 137-449
Cow position: chr25:34762789-34763101 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 22

Conread position: 139-455
Cow position: chr25:18642209-18641890 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 70

Conread position: 144-454
Cow position: chr25:34433490-34433798 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 195
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 119

Conread position: 156-455
Cow position: chr25:33305421-33305125 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 195-455
Cow position: chr25:23420317-23420577 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 207-455
Cow position: chr25:346478-346726 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 161
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 219-445
Cow position: chr25:18642213-18641984 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 148, 0

Conread position: 220-454
Cow position: chr25:34770165-34769931 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.