Cow genome map
| Conread name: | Utr2-C0001808_O10 |
| Conread position: | 1-267 |
| Cow position: | chr3:62743168-62743435 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 213, 203 |
| Conread position: | 1-359 |
| Cow position: | chr3:68027420-68027776 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 128, 121 |
| Conread position: | 1-423 |
| Cow position: | chr3:68045929-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 267 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 403, 408 |
| Conread position: | 1-436 |
| Cow position: | chr3:62742606-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 35 |
| Conread position: | 1-441 |
| Cow position: | chr3:68027000-68027440 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 128, 120 |
| Conread position: | 1-448 |
| Cow position: | chr3:62722081-62721634 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-448 |
| Cow position: | chr3:62742853-62743279 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 1-449 |
| Cow position: | chr3:68045761-68046209 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 146 |
| Conread position: | 1-455 |
| Cow position: | chr3:62742271-62742721 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-455 |
| Cow position: | chr3:68027252-68027706 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 120 |
| Conread position: | 1-455 |
| Cow position: | chr3:68045677-68046131 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 230 |
| Conread position: | 3-346 |
| Cow position: | chr3:62721911-62721568 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 119 |
| Conread position: | 3-356 |
| Cow position: | chr3:62743091-62743439 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 127, 26 |
| Conread position: | 3-455 |
| Cow position: | chr3:62722163-62721711 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 119 |
| Conread position: | 3-455 |
| Cow position: | chr3:68027086-68027538 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 406 |
| Conread position: | 3-455 |
| Cow position: | chr3:68045847-68046299 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 152 |
| Conread position: | 6-332 |
| Cow position: | chr3:77350915-77350592 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 6-447 |
| Cow position: | chr3:68027173-68027614 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-455 |
| Cow position: | chr3:62722244-62721795 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 116 |
| Conread position: | 9-434 |
| Cow position: | chr3:62721989-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 113 |
| Conread position: | 9-445 |
| Cow position: | chr3:68026843-68027276 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 9-455 |
| Cow position: | chr3:62742362-62742803 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 363, 279 |
| Conread position: | 9-455 |
| Cow position: | chr3:77351073-77350637 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 229, 39 |
| Conread position: | 11-455 |
| Cow position: | chr3:62722323-62721879 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-445 |
| Cow position: | chr3:68045604-68046037 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-445 |
| Cow position: | chr3:77351152-77350728 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 171, 49 |
| Conread position: | 17-455 |
| Cow position: | chr3:62742538-62742972 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 105 |
| Conread position: | 29-441 |
| Cow position: | chr3:62743033-62743440 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 353, 82 |
| Conread position: | 45-455 |
| Cow position: | chr3:62722448-62722047 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 139, 41 |
| Conread position: | 57-455 |
| Cow position: | chr3:68045565-68045963 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 306, 319 |
| Conread position: | 66-454 |
| Cow position: | chr3:62742252-62742639 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 230, 102 |
| Conread position: | 72-445 |
| Cow position: | chr3:77350933-77350565 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 145-455 |
| Cow position: | chr3:68027060-68027370 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 154-455 |
| Cow position: | chr3:62742256-62742556 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 250, 98 |
Show alignments to all cow chromosomes.