Cow genome map
| Conread name: | Utr2-C0001808_O10 |
| Conread position: | 1-195 |
| Cow position: | chr6:49341236-49341430 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr6:49340480-49340934 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr6:49340564-49341018 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 289 |
| Conread position: | 1-455 |
| Cow position: | chr6:49340648-49341102 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr6:49340732-49341186 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chr6:49340816-49341270 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 408 |
| Conread position: | 3-213 |
| Cow position: | chr6:49396791-49397001 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 3-359 |
| Cow position: | chr6:49396623-49396979 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-401 |
| Cow position: | chr6:49429146-49429542 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 106, 101 |
| Conread position: | 3-439 |
| Cow position: | chr6:49429062-49429498 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 274, 270 |
| Conread position: | 3-445 |
| Cow position: | chr6:49428978-49429420 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 101 |
| Conread position: | 3-452 |
| Cow position: | chr6:49340986-49341435 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 313 |
| Conread position: | 3-454 |
| Cow position: | chr6:49396287-49396738 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-454 |
| Cow position: | chr6:49396455-49396906 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 111 |
| Conread position: | 3-455 |
| Cow position: | chr6:49340902-49341354 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 395 |
| Conread position: | 3-455 |
| Cow position: | chr6:49362333-49362773 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 231, 235 |
| Conread position: | 3-455 |
| Cow position: | chr6:49396371-49396823 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 283 |
| Conread position: | 3-455 |
| Cow position: | chr6:49428894-49429346 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 134, 143 |
| Conread position: | 6-445 |
| Cow position: | chr6:49396212-49396645 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 9-455 |
| Cow position: | chr6:49340404-49340850 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 281 |
| Conread position: | 11-453 |
| Cow position: | chr6:49396547-49396989 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 226 |
| Conread position: | 13-445 |
| Cow position: | chr6:49396135-49396561 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 15-439 |
| Cow position: | chr6:49396053-49396471 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 30-455 |
| Cow position: | chr6:49395984-49396403 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 166, 172 |
| Conread position: | 51-455 |
| Cow position: | chr6:49340362-49340766 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 88-446 |
| Cow position: | chr6:49428222-49428581 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.