Cow genome map
| Conread name: | Utr2-C0001808_O10 |
| Conread position: | 1-195 |
| Cow position: | chrX:29044848-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-356 |
| Cow position: | chrX:29045016-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-361 |
| Cow position: | chrX:25310218-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 229 |
| Conread position: | 1-439 |
| Cow position: | chrX:25324671-25324233 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 121 |
| Conread position: | 1-439 |
| Cow position: | chrX:25325175-25324737 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 121 |
| Conread position: | 1-445 |
| Cow position: | chrX:25325007-25324563 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 121 |
| Conread position: | 1-445 |
| Cow position: | chrX:29045583-29045160 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 1-447 |
| Cow position: | chrX:25324755-25324309 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-447 |
| Cow position: | chrX:25324839-25324393 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 283 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 420, 415 |
| Conread position: | 1-448 |
| Cow position: | chrX:25325343-25324896 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 121 |
| Conread position: | 1-454 |
| Cow position: | chrX:25325763-25325310 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chrX:25324923-25324469 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 156 |
| Conread position: | 1-455 |
| Cow position: | chrX:25325091-25324637 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 225 |
| Conread position: | 1-455 |
| Cow position: | chrX:25325427-25324973 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 371 |
| Conread position: | 1-455 |
| Cow position: | chrX:25325511-25325057 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chrX:25325679-25325225 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chrX:25325847-25325393 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 1-455 |
| Cow position: | chrX:29045184-29044730 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-455 |
| Cow position: | chrX:29045268-29044814 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 156 |
| Conread position: | 1-455 |
| Cow position: | chrX:29045349-29044898 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 3-196 |
| Cow position: | chrX:25310388-25310581 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 3-202 |
| Cow position: | chrX:29045665-29045466 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-444 |
| Cow position: | chrX:29045098-29044657 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 3-445 |
| Cow position: | chrX:25309716-25310158 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 406 |
| Conread position: | 3-445 |
| Cow position: | chrX:25309800-25310242 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-445 |
| Cow position: | chrX:25310136-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 132, 151 |
| Conread position: | 3-454 |
| Cow position: | chrX:12627433-12627882 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 145, 57 |
| Conread position: | 3-455 |
| Cow position: | chrX:25309884-25310336 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 225 |
| Conread position: | 3-455 |
| Cow position: | chrX:25309968-25310420 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 305 |
| Conread position: | 3-455 |
| Cow position: | chrX:25310052-25310504 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 227 |
| Conread position: | 3-455 |
| Cow position: | chrX:25325257-25324805 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 201 |
| Conread position: | 3-455 |
| Cow position: | chrX:25325593-25325141 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 119 |
| Conread position: | 6-347 |
| Cow position: | chrX:29045746-29045405 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 306, 294 |
| Conread position: | 6-361 |
| Cow position: | chrX:29045830-29045475 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 6-445 |
| Cow position: | chrX:12627603-12628041 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 6-455 |
| Cow position: | chrX:13826783-13826334 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 135, 143 |
| Conread position: | 37-455 |
| Cow position: | chrX:25309667-25310084 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 15 |
| Conread position: | 153-445 |
| Cow position: | chrX:29045767-29045475 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 231-455 |
| Cow position: | chrX:29045773-29045549 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.