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Cow genome map

           
Conread name:
           
Utr2-C0001811_G15
        

               
Conread position:
               
9-248
               

               
Cow position:
               
chr10:16417374-16417603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
226, 34
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr10:69973711-69973906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
11-435
               

               
Cow position:
               
chr10:19539594-19540012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
12-500
               

               
Cow position:
               
chr10:8093080-8093569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
13-335
               

               
Cow position:
               
chr10:55382547-55382227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
14-223
               

               
Cow position:
               
chr10:25463058-25462850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr10:52047103-52046610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
15-199
               

               
Cow position:
               
chr10:55594851-55594661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
19-258
               

               
Cow position:
               
chr10:32649025-32649254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
19-402
               

               
Cow position:
               
chr10:21923287-21923672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
20-357
               

               
Cow position:
               
chr10:42231033-42230681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
20-446
               

               
Cow position:
               
chr10:66199474-66199905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
20-500
               

               
Cow position:
               
chr10:46830102-46829621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 290
               

               
Conread position:
               
21-499
               

               
Cow position:
               
chr10:16739849-16740310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 26
               

               
Conread position:
               
22-256
               

               
Cow position:
               
chr10:11281937-11282177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
22-296
               

               
Cow position:
               
chr10:44834408-44834124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 281
               

               
Conread position:
               
24-484
               

               
Cow position:
               
chr10:25150109-25149665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
24-500
               

               
Cow position:
               
chr10:52296720-52296243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
26-300
               

               
Cow position:
               
chr10:26671104-26670841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
26-416
               

               
Cow position:
               
chr10:10219871-10219480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
33, 289
               

               
Conread position:
               
26-499
               

               
Cow position:
               
chr10:63940998-63940522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 172
               

               
Conread position:
               
27-500
               

               
Cow position:
               
chr10:49846998-49846522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 278
               

               
Conread position:
               
30-236
               

               
Cow position:
               
chr10:51740706-51740506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
30-258
               

               
Cow position:
               
chr10:282422-282196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
30-309
               

               
Cow position:
               
chr10:30121633-30121343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
30-416
               

               
Cow position:
               
chr10:15751034-15750628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 165
               

               
Conread position:
               
31-499
               

               
Cow position:
               
chr10:25699880-25699410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 276
               

               
Conread position:
               
32-258
               

               
Cow position:
               
chr10:49862684-49862459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
32-269
               

               
Cow position:
               
chr10:38195759-38195994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
32-278
               

               
Cow position:
               
chr10:6932273-6932514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
33-241
               

               
Cow position:
               
chr10:12960081-12960294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
33-329
               

               
Cow position:
               
chr10:59849621-59849334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
33-500
               

               
Cow position:
               
chr10:65345250-65345704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
34-500
               

               
Cow position:
               
chr10:24312678-24313143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
35-292
               

               
Cow position:
               
chr10:37795667-37795947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr10:37818345-37818806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
35-500
               

               
Cow position:
               
chr10:15889698-15889234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 275
               

               
Conread position:
               
35-500
               

               
Cow position:
               
chr10:30522852-30523311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
36-254
               

               
Cow position:
               
chr10:50051859-50052083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
36-258
               

               
Cow position:
               
chr10:7786984-7786759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
36-420
               

               
Cow position:
               
chr10:53365230-53364855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
36-489
               

               
Cow position:
               
chr10:19590571-19591008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
260, 30
               

               
Conread position:
               
36-499
               

               
Cow position:
               
chr10:37235334-37235807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
37-202
               

               
Cow position:
               
chr10:49686950-49686790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
38-292
               

               
Cow position:
               
chr10:52125478-52125729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
38-327
               

               
Cow position:
               
chr10:23329113-23328827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
261, 19
               

               
Conread position:
               
38-345
               

               
Cow position:
               
chr10:1079562-1079260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
38-499
               

               
Cow position:
               
chr10:27716627-27717095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
38-499
               

               
Cow position:
               
chr10:50360119-50359660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
38-500
               

               
Cow position:
               
chr10:10751774-10752234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
39-263
               

               
Cow position:
               
chr10:17304159-17304380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 177
               

               
Conread position:
               
39-269
               

               
Cow position:
               
chr10:37400618-37400400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
39-270
               

               
Cow position:
               
chr10:58642098-58642333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 220
               

               
Conread position:
               
39-407
               

               
Cow position:
               
chr10:6384729-6384379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
39-481
               

               
Cow position:
               
chr10:28841157-28840718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 26
               

               
Conread position:
               
39-484
               

               
Cow position:
               
chr10:62220050-62219586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
39-492
               

               
Cow position:
               
chr10:33666055-33665594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr10:31466950-31466490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr10:37014844-37014385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr10:43450680-43451173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr10:56835507-56835025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
40-212
               

               
Cow position:
               
chr10:27262266-27262440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
40-247
               

               
Cow position:
               
chr10:32336230-32336019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
40-258
               

               
Cow position:
               
chr10:46876250-46876027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
40-262
               

               
Cow position:
               
chr10:23478727-23478944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
40-268
               

               
Cow position:
               
chr10:39140515-39140301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
40-387
               

               
Cow position:
               
chr10:41132469-41132134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
40-462
               

               
Cow position:
               
chr10:27328268-27328710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
40-492
               

               
Cow position:
               
chr10:11009627-11009178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
40-499
               

               
Cow position:
               
chr10:31027432-31027897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 291
               

               
Conread position:
               
40-499
               

               
Cow position:
               
chr10:41737499-41737053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
40-500
               

               
Cow position:
               
chr10:29102131-29102578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
40-500
               

               
Cow position:
               
chr10:49455889-49456330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
40-500
               

               
Cow position:
               
chr10:53179473-53179049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
41-368
               

               
Cow position:
               
chr10:55577531-55577199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
41-469
               

               
Cow position:
               
chr10:7817322-7816885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
41-499
               

               
Cow position:
               
chr10:16297143-16297567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
41-500
               

               
Cow position:
               
chr10:16644980-16645448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
41-500
               

               
Cow position:
               
chr10:29361141-29360654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 355
               

               
Conread position:
               
41-500
               

               
Cow position:
               
chr10:52569803-52569341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 285
               

               
Conread position:
               
42-209
               

               
Cow position:
               
chr10:35717064-35717235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 162
               

               
Conread position:
               
42-284
               

               
Cow position:
               
chr10:53706834-53706585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
42-491
               

               
Cow position:
               
chr10:6986668-6986204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
42-500
               

               
Cow position:
               
chr10:26019-25574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 20
               

               
Conread position:
               
44-256
               

               
Cow position:
               
chr10:59424806-59424590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
44-385
               

               
Cow position:
               
chr10:36531524-36531868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
44-500
               

               
Cow position:
               
chr10:39398318-39398772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
45-254
               

               
Cow position:
               
chr10:9959420-9959209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
45-254
               

               
Cow position:
               
chr10:58807544-58807751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
45-313
               

               
Cow position:
               
chr10:49224116-49223846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
46-199
               

               
Cow position:
               
chr10:13363669-13363831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
46-265
               

               
Cow position:
               
chr10:51691082-51690864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
46-389
               

               
Cow position:
               
chr10:10750054-10750395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 48
               

               
Conread position:
               
46-488
               

               
Cow position:
               
chr10:54947943-54948372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
47-299
               

               
Cow position:
               
chr10:10027777-10027523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
47-355
               

               
Cow position:
               
chr10:33084245-33084543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
47-436
               

               
Cow position:
               
chr10:69048840-69049235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
6, 205
               

               
Conread position:
               
47-500
               

               
Cow position:
               
chr10:29212161-29211704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
58, 267
               

               
Conread position:
               
48-258
               

               
Cow position:
               
chr10:37507953-37508158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
48-336
               

               
Cow position:
               
chr10:60491065-60491346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
48-374
               

               
Cow position:
               
chr10:63312532-63312861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 190
               

               
Conread position:
               
48-436
               

               
Cow position:
               
chr10:4148693-4148294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
48-441
               

               
Cow position:
               
chr10:7291613-7291987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
48-491
               

               
Cow position:
               
chr10:43509200-43508750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
48-500
               

               
Cow position:
               
chr10:9675273-9675710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 35
               

               
Conread position:
               
49-270
               

               
Cow position:
               
chr10:6719175-6718953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
49-330
               

               
Cow position:
               
chr10:52072738-52073018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
49-358
               

               
Cow position:
               
chr10:46934576-46934894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
49-373
               

               
Cow position:
               
chr10:30888671-30888983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
49-402
               

               
Cow position:
               
chr10:42123391-42123746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
49-410
               

               
Cow position:
               
chr10:37884612-37884953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
49-447
               

               
Cow position:
               
chr10:40738187-40737807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
49-474
               

               
Cow position:
               
chr10:24756607-24756200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr10:15868457-15867981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr10:41408467-41408033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr10:45337884-45337411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
50-205
               

               
Cow position:
               
chr10:35720311-35720151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr10:52152995-52152804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr10:44513058-44513284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
50-270
               

               
Cow position:
               
chr10:15601980-15602206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
50-298
               

               
Cow position:
               
chr10:34700814-34700580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
50-330
               

               
Cow position:
               
chr10:17567908-17568184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr10:23346111-23346393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
50-364
               

               
Cow position:
               
chr10:66365504-66365177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 240
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr10:39124334-39123998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
50-380
               

               
Cow position:
               
chr10:46327888-46327557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr10:45658336-45657960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
50-490
               

               
Cow position:
               
chr10:34661134-34661561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
50-492
               

               
Cow position:
               
chr10:51306534-51306080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
50-499
               

               
Cow position:
               
chr10:37512043-37512501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
51-241
               

               
Cow position:
               
chr10:61171457-61171264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr10:26750554-26750347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
51-271
               

               
Cow position:
               
chr10:62277128-62277351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
51-273
               

               
Cow position:
               
chr10:46043193-46042968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
51-296
               

               
Cow position:
               
chr10:31718185-31718432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
51-296
               

               
Cow position:
               
chr10:47159403-47159166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
51-458
               

               
Cow position:
               
chr10:37534789-37534399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
51-492
               

               
Cow position:
               
chr10:63276587-63276145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
51-500
               

               
Cow position:
               
chr10:24560792-24561241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
52-224
               

               
Cow position:
               
chr10:30452028-30451862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
52-239
               

               
Cow position:
               
chr10:18187926-18187722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
52-243
               

               
Cow position:
               
chr10:53766539-53766343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
52-252
               

               
Cow position:
               
chr10:27258940-27259135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
52-282
               

               
Cow position:
               
chr10:37174261-37174487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
52-329
               

               
Cow position:
               
chr10:11059954-11059677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 248
               

               
Conread position:
               
52-389
               

               
Cow position:
               
chr10:27118767-27119107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
52-463
               

               
Cow position:
               
chr10:44730279-44730698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
52-492
               

               
Cow position:
               
chr10:46195978-46195546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr10:29188149-29188615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 271
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr10:33890903-33891341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr10:68182764-68183185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
53-218
               

               
Cow position:
               
chr10:66940641-66940814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
53-247
               

               
Cow position:
               
chr10:41618283-41618481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
53-258
               

               
Cow position:
               
chr10:2328388-2328178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
53-288
               

               
Cow position:
               
chr10:62454169-62454410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
53-346
               

               
Cow position:
               
chr10:25813512-25813206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
53-427
               

               
Cow position:
               
chr10:69587488-69587856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
53-442
               

               
Cow position:
               
chr10:19191952-19191586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
53-486
               

               
Cow position:
               
chr10:37989486-37989069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 144
               

               
Conread position:
               
53-500
               

               
Cow position:
               
chr10:15817606-15818050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 12
               

               
Conread position:
               
54-226
               

               
Cow position:
               
chr10:47673119-47673296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
54-499
               

               
Cow position:
               
chr10:35731335-35731779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
55-343
               

               
Cow position:
               
chr10:10138056-10137773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
55-364
               

               
Cow position:
               
chr10:19099024-19098722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
55-389
               

               
Cow position:
               
chr10:58451190-58451512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
243, 16
               

               
Conread position:
               
56-231
               

               
Cow position:
               
chr10:13350014-13350193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
56-256
               

               
Cow position:
               
chr10:53698602-53698398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
56-258
               

               
Cow position:
               
chr10:11060341-11060538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
56-364
               

               
Cow position:
               
chr10:61509756-61510056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
56-380
               

               
Cow position:
               
chr10:60446921-60446601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr10:35901511-35901083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr10:37224987-37225431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr10:39228354-39227903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr10:56475646-56475215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 21
               

               
Conread position:
               
57-201
               

               
Cow position:
               
chr10:43909654-43909804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
57-226
               

               
Cow position:
               
chr10:35017931-35017754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
57-254
               

               
Cow position:
               
chr10:4626716-4626517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
57-254
               

               
Cow position:
               
chr10:40999049-40998851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
57-256
               

               
Cow position:
               
chr10:43918444-43918242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
57-258
               

               
Cow position:
               
chr10:9797721-9797917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
57-272
               

               
Cow position:
               
chr10:52062020-52061796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
57-306
               

               
Cow position:
               
chr10:35248947-35249192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 162
               

               
Conread position:
               
57-314
               

               
Cow position:
               
chr10:23379321-23379068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr10:6569456-6569764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
57-379
               

               
Cow position:
               
chr10:52881425-52881750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
57-389
               

               
Cow position:
               
chr10:53076319-53075981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
57-390
               

               
Cow position:
               
chr10:2899871-2899539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
57-420
               

               
Cow position:
               
chr10:51803855-51804201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 187
               

               
Conread position:
               
57-491
               

               
Cow position:
               
chr10:42637422-42636979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
57-492
               

               
Cow position:
               
chr10:16598884-16598443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 281
               

               
Conread position:
               
57-499
               

               
Cow position:
               
chr10:25936431-25935991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 185
               

               
Conread position:
               
57-499
               

               
Cow position:
               
chr10:45371247-45370802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr10:5543058-5543503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr10:11081163-11080704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr10:14947444-14947013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr10:21657604-21657166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 63
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr10:33215986-33215543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr10:35904650-35905084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr10:47543261-47542837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr10:62353646-62353212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
58-236
               

               
Cow position:
               
chr10:19403103-19402920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
58-236
               

               
Cow position:
               
chr10:64198903-64198731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
58-245
               

               
Cow position:
               
chr10:69937253-69937449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
58-248
               

               
Cow position:
               
chr10:21528983-21528787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
58-248
               

               
Cow position:
               
chr10:21546357-21546161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
58-258
               

               
Cow position:
               
chr10:17448017-17448209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
58-258
               

               
Cow position:
               
chr10:52003077-52003281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
58-275
               

               
Cow position:
               
chr10:14622574-14622351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 172
               

               
Conread position:
               
58-276
               

               
Cow position:
               
chr10:54548692-54548484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
58-279
               

               
Cow position:
               
chr10:37567664-37567454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
58-300
               

               
Cow position:
               
chr10:38995424-38995176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
58-380
               

               
Cow position:
               
chr10:61921954-61922270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
58-418
               

               
Cow position:
               
chr10:26829615-26829985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
47, 209
               

               
Conread position:
               
58-436
               

               
Cow position:
               
chr10:8811758-8812128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 244
               

               
Conread position:
               
58-447
               

               
Cow position:
               
chr10:37765228-37764825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 300
               

               
Conread position:
               
58-449
               

               
Cow position:
               
chr10:8161696-8161301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
58-489
               

               
Cow position:
               
chr10:50109708-50110147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
58-498
               

               
Cow position:
               
chr10:48259054-48259483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 152
               

               
Conread position:
               
59-238
               

               
Cow position:
               
chr10:58651003-58651180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
59-254
               

               
Cow position:
               
chr10:57095017-57095207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
182, 20
               

               
Conread position:
               
59-417
               

               
Cow position:
               
chr10:38241268-38240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
59-491
               

               
Cow position:
               
chr10:7304754-7304326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
59-492
               

               
Cow position:
               
chr10:25342771-25342346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
59-500
               

               
Cow position:
               
chr10:22341764-22341311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
60-259
               

               
Cow position:
               
chr10:24035829-24036030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 171
               

               
Conread position:
               
60-300
               

               
Cow position:
               
chr10:2535750-2535519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
60-440
               

               
Cow position:
               
chr10:38421449-38421831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
60-500
               

               
Cow position:
               
chr10:10720483-10720930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
61-211
               

               
Cow position:
               
chr10:847038-847199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
62-257
               

               
Cow position:
               
chr10:6964225-6964427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
62-470
               

               
Cow position:
               
chr10:30787439-30787832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
64-273
               

               
Cow position:
               
chr10:8847357-8847133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
64-486
               

               
Cow position:
               
chr10:2304206-2304617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
64-500
               

               
Cow position:
               
chr10:4311345-4310934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
65-254
               

               
Cow position:
               
chr10:46228868-46228682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
65-254
               

               
Cow position:
               
chr10:61146732-61146537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
65-332
               

               
Cow position:
               
chr10:56136689-56136412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 251
               

               
Conread position:
               
65-443
               

               
Cow position:
               
chr10:68927332-68926961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
65-456
               

               
Cow position:
               
chr10:10120369-10119994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
65-466
               

               
Cow position:
               
chr10:35653853-35653446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
65-498
               

               
Cow position:
               
chr10:50558746-50559179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
65-499
               

               
Cow position:
               
chr10:20371947-20372384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 156
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr10:15871708-15872117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 13
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr10:39874958-39875399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr10:46151052-46150631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
66-243
               

               
Cow position:
               
chr10:30801504-30801322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
66-245
               

               
Cow position:
               
chr10:22594103-22593926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
66-252
               

               
Cow position:
               
chr10:46171851-46172044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 184
               

               
Conread position:
               
66-257
               

               
Cow position:
               
chr10:35486255-35486450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
66-336
               

               
Cow position:
               
chr10:35715404-35715689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
66-383
               

               
Cow position:
               
chr10:3364002-3364311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr10:55064076-55063754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
38, 232
               

               
Conread position:
               
66-492
               

               
Cow position:
               
chr10:1424017-1423585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 245
               

               
Conread position:
               
66-499
               

               
Cow position:
               
chr10:32417526-32417111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
66-499
               

               
Cow position:
               
chr10:50332776-50332336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
66-499
               

               
Cow position:
               
chr10:58557348-58556943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
66-500
               

               
Cow position:
               
chr10:31400717-31401152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
66-500
               

               
Cow position:
               
chr10:60961128-60960686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
67-202
               

               
Cow position:
               
chr10:17984066-17983926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
67-207
               

               
Cow position:
               
chr10:35820156-35820297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
67-209
               

               
Cow position:
               
chr10:15334916-15335060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
67-236
               

               
Cow position:
               
chr10:17518663-17518836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
67-236
               

               
Cow position:
               
chr10:55270834-55271014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
67-237
               

               
Cow position:
               
chr10:58066006-58066179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr10:5608137-5607950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr10:7309267-7309453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr10:30836851-30837037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
67-255
               

               
Cow position:
               
chr10:19503098-19503291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
67-256
               

               
Cow position:
               
chr10:25968348-25968159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
67-257
               

               
Cow position:
               
chr10:3986073-3985880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr10:34705460-34705266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
67-264
               

               
Cow position:
               
chr10:38800022-38799827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
67-268
               

               
Cow position:
               
chr10:58638187-58637993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
67-270
               

               
Cow position:
               
chr10:48814246-48814450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-271
               

               
Cow position:
               
chr10:37822414-37822631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 207
               

               
Conread position:
               
67-277
               

               
Cow position:
               
chr10:50050080-50049880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr10:27178668-27178465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
67-284
               

               
Cow position:
               
chr10:7835413-7835623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr10:6516888-6516658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 178
               

               
Conread position:
               
67-294
               

               
Cow position:
               
chr10:49923181-49923420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
67-297
               

               
Cow position:
               
chr10:10634394-10634169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
67-297
               

               
Cow position:
               
chr10:22980798-22981028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr10:704805-705048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr10:14093068-14093295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr10:35981774-35981537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
67-305
               

               
Cow position:
               
chr10:35605225-35604992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
67-312
               

               
Cow position:
               
chr10:5014131-5014358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
67-314
               

               
Cow position:
               
chr10:48377213-48377462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 166
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr10:60962616-60962351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 247
               

               
Conread position:
               
67-324
               

               
Cow position:
               
chr10:34546820-34546557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
67-336
               

               
Cow position:
               
chr10:63484819-63484554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
67-351
               

               
Cow position:
               
chr10:67379478-67379196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
67-367
               

               
Cow position:
               
chr10:33881598-33881901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 247
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr10:38355921-38356228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
67-377
               

               
Cow position:
               
chr10:49942654-49942344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 274
               

               
Conread position:
               
67-381
               

               
Cow position:
               
chr10:25913599-25913927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 184
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr10:56996529-56996846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
67-420
               

               
Cow position:
               
chr10:2201953-2202294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 70
               

               
Conread position:
               
67-420
               

               
Cow position:
               
chr10:9656343-9656710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
67-421
               

               
Cow position:
               
chr10:6531984-6532322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 68
               

               
Conread position:
               
67-424
               

               
Cow position:
               
chr10:60236918-60237267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 91
               

               
Conread position:
               
67-436
               

               
Cow position:
               
chr10:16986517-16986145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 271
               

               
Conread position:
               
67-437
               

               
Cow position:
               
chr10:11463478-11463853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 203
               

               
Conread position:
               
67-440
               

               
Cow position:
               
chr10:45476038-45476404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
67-441
               

               
Cow position:
               
chr10:41268965-41268597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
67-447
               

               
Cow position:
               
chr10:24276549-24276928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
67-459
               

               
Cow position:
               
chr10:64227571-64227207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
67-461
               

               
Cow position:
               
chr10:45871699-45871298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-476
               

               
Cow position:
               
chr10:52695545-52695953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
67-480
               

               
Cow position:
               
chr10:45378820-45379242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
67-486
               

               
Cow position:
               
chr10:55051064-55050630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
38, 276
               

               
Conread position:
               
67-488
               

               
Cow position:
               
chr10:44771828-44771414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr10:64042265-64041838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:14850400-14849986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:19372152-19372574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 235
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:19394384-19394825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 284
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:24753318-24752910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:28721960-28721544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:29166462-29166032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 176
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:34654930-34655357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:56733210-56732800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr10:61588075-61588507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 243
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr10:2613548-2613129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:2449534-2449099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:13586884-13586460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:15319084-15318634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:19895576-19895145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:31362037-31362464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:34607746-34607304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 326
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:35792109-35791679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:36490200-36489765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:43439036-43438616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:43487897-43487457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:51944540-51944108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:57033615-57034044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 188
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:57786517-57786083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr10:69934601-69935031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
67-501
               

               
Cow position:
               
chr10:31534920-31534496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 274
               

               
Conread position:
               
68-189
               

               
Cow position:
               
chr10:55194575-55194696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 85
               

               
Conread position:
               
68-248
               

               
Cow position:
               
chr10:32799079-32799260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
68-255
               

               
Cow position:
               
chr10:28843540-28843350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
68-257
               

               
Cow position:
               
chr10:63133272-63133465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 179
               

               
Conread position:
               
68-258
               

               
Cow position:
               
chr10:24915538-24915729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
68-270
               

               
Cow position:
               
chr10:64877526-64877732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 200
               

               
Conread position:
               
68-294
               

               
Cow position:
               
chr10:38205537-38205757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
68-295
               

               
Cow position:
               
chr10:51879040-51879278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 129
               

               
Conread position:
               
68-296
               

               
Cow position:
               
chr10:10153185-10152961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr10:8853731-8853501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
68-299
               

               
Cow position:
               
chr10:24830892-24831135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
68-299
               

               
Cow position:
               
chr10:32127961-32127711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
68-299
               

               
Cow position:
               
chr10:50042799-50042556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 186
               

               
Conread position:
               
68-300
               

               
Cow position:
               
chr10:29974010-29974228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
68-326
               

               
Cow position:
               
chr10:30369647-30369903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
240, 9
               

               
Conread position:
               
68-342
               

               
Cow position:
               
chr10:24448039-24447769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
135, 10
               

               
Conread position:
               
68-378
               

               
Cow position:
               
chr10:31004834-31005148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
68-395
               

               
Cow position:
               
chr10:24004282-24004617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
68-432
               

               
Cow position:
               
chr10:4109759-4109411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
68-432
               

               
Cow position:
               
chr10:47690577-47690212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
68-480
               

               
Cow position:
               
chr10:48316763-48317190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 181
               

               
Conread position:
               
68-485
               

               
Cow position:
               
chr10:60721974-60722383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
68-492
               

               
Cow position:
               
chr10:56079980-56080420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
68-494
               

               
Cow position:
               
chr10:58691082-58690656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr10:13311923-13311478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr10:23576721-23576289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr10:23912331-23912750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr10:39387629-39387205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr10:54504782-54504348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr10:57059094-57059535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
69-204
               

               
Cow position:
               
chr10:36945619-36945759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-226
               

               
Cow position:
               
chr10:18849703-18849544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
69-256
               

               
Cow position:
               
chr10:33772630-33772439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 174
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr10:28223396-28223192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr10:20485380-20485609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
69-308
               

               
Cow position:
               
chr10:35090232-35089988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-355
               

               
Cow position:
               
chr10:55395799-55396084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
69-381
               

               
Cow position:
               
chr10:14396477-14396776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 147
               

               
Conread position:
               
69-389
               

               
Cow position:
               
chr10:6664210-6663886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 78
               

               
Conread position:
               
69-441
               

               
Cow position:
               
chr10:32834991-32834627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
69-446
               

               
Cow position:
               
chr10:4184383-4183996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 328
               

               
Conread position:
               
69-485
               

               
Cow position:
               
chr10:37415962-37415546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
69-488
               

               
Cow position:
               
chr10:14816981-14817407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
69-491
               

               
Cow position:
               
chr10:10048857-10048437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr10:5889580-5890016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr10:59009959-59010387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr10:65071501-65071065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr10:9575869-9576293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr10:24096185-24096633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 309
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr10:35862052-35862484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr10:38133302-38133737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr10:38942619-38942172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 246
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr10:48257095-48257533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
70-236
               

               
Cow position:
               
chr10:15570379-15570220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
70-272
               

               
Cow position:
               
chr10:10476525-10476721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
70-300
               

               
Cow position:
               
chr10:43272861-43273097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
70-468
               

               
Cow position:
               
chr10:1996495-1996887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
70-492
               

               
Cow position:
               
chr10:54848956-54848533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
70-500
               

               
Cow position:
               
chr10:31528146-31527740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
70-500
               

               
Cow position:
               
chr10:64285620-64286050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
70-501
               

               
Cow position:
               
chr10:33195224-33194766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 378
               

               
Conread position:
               
71-235
               

               
Cow position:
               
chr10:40933941-40933770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
71-261
               

               
Cow position:
               
chr10:22972826-22973018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 190
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr10:43676293-43676524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 44
               

               
Conread position:
               
71-292
               

               
Cow position:
               
chr10:39258313-39258539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
71-299
               

               
Cow position:
               
chr10:36399870-36400108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
71-299
               

               
Cow position:
               
chr10:36400905-36401143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
71-368
               

               
Cow position:
               
chr10:25509858-25509554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 295
               

               
Conread position:
               
71-395
               

               
Cow position:
               
chr10:67728674-67729004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 264
               

               
Conread position:
               
71-460
               

               
Cow position:
               
chr10:12486423-12486054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
71-491
               

               
Cow position:
               
chr10:34898134-34897753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
71-498
               

               
Cow position:
               
chr10:66128028-66127605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr10:16093388-16092961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr10:17073189-17073607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr10:42313084-42312654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr10:28571579-28571420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
72-248
               

               
Cow position:
               
chr10:55235434-55235613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
72-254
               

               
Cow position:
               
chr10:48353765-48353941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
72-263
               

               
Cow position:
               
chr10:15383507-15383311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
72-267
               

               
Cow position:
               
chr10:58148992-58149189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
72-274
               

               
Cow position:
               
chr10:39410976-39410782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
72-292
               

               
Cow position:
               
chr10:32929163-32928930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
72-299
               

               
Cow position:
               
chr10:32080444-32080223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
72-332
               

               
Cow position:
               
chr10:35473812-35473549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 223
               

               
Conread position:
               
72-442
               

               
Cow position:
               
chr10:63884122-63883761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 178
               

               
Conread position:
               
72-462
               

               
Cow position:
               
chr10:17837130-17836733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 245
               

               
Conread position:
               
72-478
               

               
Cow position:
               
chr10:6436234-6435827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
72-486
               

               
Cow position:
               
chr10:22616464-22616883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
72-491
               

               
Cow position:
               
chr10:37708850-37709282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
72-492
               

               
Cow position:
               
chr10:20095944-20095508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 191
               

               
Conread position:
               
72-498
               

               
Cow position:
               
chr10:40163758-40164184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr10:2462302-2462731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 179
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr10:32775284-32774863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr10:62286741-62286298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr10:2973895-2974342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 249
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr10:13764987-13765418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr10:21082548-21082141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr10:37529097-37529523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr10:51289420-51289000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr10:57461530-57461111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
73-243
               

               
Cow position:
               
chr10:37971938-37971773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
73-258
               

               
Cow position:
               
chr10:53971930-53972115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
73-269
               

               
Cow position:
               
chr10:5473722-5473924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
73-284
               

               
Cow position:
               
chr10:35637966-35638176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
73-293
               

               
Cow position:
               
chr10:30261431-30261648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
73-341
               

               
Cow position:
               
chr10:53429057-53428783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-359
               

               
Cow position:
               
chr10:48178515-48178243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
73-437
               

               
Cow position:
               
chr10:19709560-19709174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
73-475
               

               
Cow position:
               
chr10:43531443-43531026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
73-499
               

               
Cow position:
               
chr10:28176226-28176646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr10:1976143-1976574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr10:38370276-38370716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr10:40107279-40106862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr10:49146683-49146279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
74-254
               

               
Cow position:
               
chr10:42371700-42371892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
74-300
               

               
Cow position:
               
chr10:37425963-37426186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
74-356
               

               
Cow position:
               
chr10:48407308-48407030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
233, 45
               

               
Conread position:
               
74-357
               

               
Cow position:
               
chr10:22888643-22888924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
154, 81
               

               
Conread position:
               
74-385
               

               
Cow position:
               
chr10:45294965-45295276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
24, 246
               

               
Conread position:
               
74-446
               

               
Cow position:
               
chr10:20391259-20391640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 175
               

               
Conread position:
               
74-485
               

               
Cow position:
               
chr10:20553354-20552942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
74-492
               

               
Cow position:
               
chr10:41626767-41626362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
74-492
               

               
Cow position:
               
chr10:47773895-47773488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
74-499
               

               
Cow position:
               
chr10:10148825-10148397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 215
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr10:9288203-9287813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr10:62114860-62114444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
75-459
               

               
Cow position:
               
chr10:24421998-24422367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
75-499
               

               
Cow position:
               
chr10:55122983-55122537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
76-312
               

               
Cow position:
               
chr10:54776719-54776481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
77-240
               

               
Cow position:
               
chr10:60250899-60251071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
77-247
               

               
Cow position:
               
chr10:18155494-18155321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 152
               

               
Conread position:
               
77-257
               

               
Cow position:
               
chr10:36855955-36856141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
77-268
               

               
Cow position:
               
chr10:27544624-27544433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
77-270
               

               
Cow position:
               
chr10:47559388-47559573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
77-284
               

               
Cow position:
               
chr10:2857219-2857011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
77-290
               

               
Cow position:
               
chr10:16830212-16830429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
77-309
               

               
Cow position:
               
chr10:9951375-9951140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 209
               

               
Conread position:
               
77-336
               

               
Cow position:
               
chr10:33185496-33185234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 243
               

               
Conread position:
               
77-339
               

               
Cow position:
               
chr10:58043955-58044221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 243
               

               
Conread position:
               
77-380
               

               
Cow position:
               
chr10:12651998-12651706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
77-382
               

               
Cow position:
               
chr10:7383445-7383743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr10:23026664-23026363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
77-389
               

               
Cow position:
               
chr10:15248867-15249186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 236
               

               
Conread position:
               
77-400
               

               
Cow position:
               
chr10:38430395-38430714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
77-420
               

               
Cow position:
               
chr10:44764320-44764674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
77-436
               

               
Cow position:
               
chr10:5020227-5020550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
77-440
               

               
Cow position:
               
chr10:69564778-69564416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
77-453
               

               
Cow position:
               
chr10:17022397-17022764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
77-469
               

               
Cow position:
               
chr10:17844937-17844536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
77-492
               

               
Cow position:
               
chr10:19104010-19104422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 135
               

               
Conread position:
               
77-499
               

               
Cow position:
               
chr10:64182615-64182197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr10:8277727-8277288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr10:23506317-23506739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr10:24871343-24870911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 234
               

               
Conread position:
               
78-289
               

               
Cow position:
               
chr10:17389026-17388799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
78-294
               

               
Cow position:
               
chr10:49634236-49634020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
78-368
               

               
Cow position:
               
chr10:66605491-66605783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
78-482
               

               
Cow position:
               
chr10:28152225-28152619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 72
               

               
Conread position:
               
78-492
               

               
Cow position:
               
chr10:33914897-33915297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
78-497
               

               
Cow position:
               
chr10:48462176-48462589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
78-498
               

               
Cow position:
               
chr10:69567992-69567602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
78-499
               

               
Cow position:
               
chr10:10469134-10468725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 23
               

               
Conread position:
               
78-500
               

               
Cow position:
               
chr10:6235288-6235677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
78-500
               

               
Cow position:
               
chr10:50533707-50534127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 30
               

               
Conread position:
               
79-286
               

               
Cow position:
               
chr10:27136515-27136727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 193
               

               
Conread position:
               
79-336
               

               
Cow position:
               
chr10:47182396-47182653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 109
               

               
Conread position:
               
79-497
               

               
Cow position:
               
chr10:35867847-35868252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
79-500
               

               
Cow position:
               
chr10:18042352-18041931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 227
               

               
Conread position:
               
80-236
               

               
Cow position:
               
chr10:29713319-29713156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 154
               

               
Conread position:
               
80-241
               

               
Cow position:
               
chr10:48347873-48347712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
80-269
               

               
Cow position:
               
chr10:64394251-64394057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
80-429
               

               
Cow position:
               
chr10:45965664-45965322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
80-492
               

               
Cow position:
               
chr10:721459-721053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
80-500
               

               
Cow position:
               
chr10:54731193-54730757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
82-500
               

               
Cow position:
               
chr10:50182887-50183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
83-500
               

               
Cow position:
               
chr10:6505518-6505107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
85-298
               

               
Cow position:
               
chr10:23071578-23071795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
20, 178
               

               
Conread position:
               
85-299
               

               
Cow position:
               
chr10:17691073-17691280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
85-301
               

               
Cow position:
               
chr10:41116064-41115851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
85-363
               

               
Cow position:
               
chr10:29328234-29328501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
87-235
               

               
Cow position:
               
chr10:44122262-44122114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
87-242
               

               
Cow position:
               
chr10:8281429-8281269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
87-271
               

               
Cow position:
               
chr10:2709030-2708847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
87-271
               

               
Cow position:
               
chr10:15899941-15899756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
87-287
               

               
Cow position:
               
chr10:30929723-30929927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
87-296
               

               
Cow position:
               
chr10:17797556-17797763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
87-296
               

               
Cow position:
               
chr10:21564911-21564700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 116
               

               
Conread position:
               
87-301
               

               
Cow position:
               
chr10:48619852-48620065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
87-308
               

               
Cow position:
               
chr10:20133712-20133935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
87-317
               

               
Cow position:
               
chr10:23127823-23128051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
87-329
               

               
Cow position:
               
chr10:55319655-55319409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
87-330
               

               
Cow position:
               
chr10:51727264-51727499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
87-336
               

               
Cow position:
               
chr10:13918110-13918340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr10:46262346-46262081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
87-468
               

               
Cow position:
               
chr10:11624092-11623701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 220
               

               
Conread position:
               
87-487
               

               
Cow position:
               
chr10:10985350-10985736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
87-492
               

               
Cow position:
               
chr10:26577717-26577304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 248
               

               
Conread position:
               
87-492
               

               
Cow position:
               
chr10:42746072-42745667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr10:30460830-30460391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr10:56828158-56828575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
88-385
               

               
Cow position:
               
chr10:15309248-15309533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr10:58718814-58718407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
88-500
               

               
Cow position:
               
chr10:40420694-40421099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
88-500
               

               
Cow position:
               
chr10:41273131-41272713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
88-500
               

               
Cow position:
               
chr10:49168867-49169311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
89-440
               

               
Cow position:
               
chr10:61982550-61982204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 216
               

               
Conread position:
               
89-470
               

               
Cow position:
               
chr10:66194143-66194528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 5
               

               
Conread position:
               
91-500
               

               
Cow position:
               
chr10:35802206-35802623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 64
               

               
Conread position:
               
95-485
               

               
Cow position:
               
chr10:52278875-52278488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
97-330
               

               
Cow position:
               
chr10:58488351-58488132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
97-381
               

               
Cow position:
               
chr10:8449665-8449366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
98-427
               

               
Cow position:
               
chr10:37295523-37295839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
101-282
               

               
Cow position:
               
chr10:47670714-47670531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
101-352
               

               
Cow position:
               
chr10:46575651-46575404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
194, 25
               

               
Conread position:
               
101-354
               

               
Cow position:
               
chr10:41198039-41197783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
101-436
               

               
Cow position:
               
chr10:48512933-48513269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 286
               

               
Conread position:
               
101-498
               

               
Cow position:
               
chr10:32503576-32503198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
101-500
               

               
Cow position:
               
chr10:1488973-1488595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
101-500
               

               
Cow position:
               
chr10:12392459-12392857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
101-500
               

               
Cow position:
               
chr10:28395161-28395546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
101-500
               

               
Cow position:
               
chr10:64876668-64876263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 223
               

               
Conread position:
               
102-250
               

               
Cow position:
               
chr10:24808636-24808489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
103-332
               

               
Cow position:
               
chr10:54699562-54699791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
103-472
               

               
Cow position:
               
chr10:65551023-65550641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 201
               

               
Conread position:
               
103-489
               

               
Cow position:
               
chr10:23500084-23500459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 199
               

               
Conread position:
               
107-362
               

               
Cow position:
               
chr10:13197685-13197951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
108-259
               

               
Cow position:
               
chr10:36775215-36775366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
108-500
               

               
Cow position:
               
chr10:26631539-26631182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
341, 29
               

               
Conread position:
               
109-499
               

               
Cow position:
               
chr10:53247871-53248260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr10:15425187-15424954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
116-410
               

               
Cow position:
               
chr10:6543855-6543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
172, 7
               

               
Conread position:
               
121-500
               

               
Cow position:
               
chr10:34430101-34430469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
122-368
               

               
Cow position:
               
chr10:63628311-63628058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
177, 15
               

               
Conread position:
               
122-461
               

               
Cow position:
               
chr10:51069195-51068842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
124-313
               

               
Cow position:
               
chr10:25466192-25466002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
124-491
               

               
Cow position:
               
chr10:23886334-23886694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
126-381
               

               
Cow position:
               
chr10:52120857-52120607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
126-470
               

               
Cow position:
               
chr10:33732752-33733093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 22
               

               
Conread position:
               
127-500
               

               
Cow position:
               
chr10:24022163-24022534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 50
               

               
Conread position:
               
128-336
               

               
Cow position:
               
chr10:17553301-17553095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
128-406
               

               
Cow position:
               
chr10:42318600-42318881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
128-406
               

               
Cow position:
               
chr10:42409884-42409603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
128-499
               

               
Cow position:
               
chr10:5151465-5151098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
128-500
               

               
Cow position:
               
chr10:60388641-60389013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
129-309
               

               
Cow position:
               
chr10:49253479-49253305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
130-290
               

               
Cow position:
               
chr10:33371505-33371342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
130-418
               

               
Cow position:
               
chr10:47725059-47724780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 36
               

               
Conread position:
               
130-492
               

               
Cow position:
               
chr10:35902834-35903191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 168
               

               
Conread position:
               
130-500
               

               
Cow position:
               
chr10:59839173-59839539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 20
               

               
Conread position:
               
131-305
               

               
Cow position:
               
chr10:29091231-29091404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
131-313
               

               
Cow position:
               
chr10:1108345-1108529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
131-331
               

               
Cow position:
               
chr10:37707206-37707003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
131-352
               

               
Cow position:
               
chr10:22708316-22708101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
131-364
               

               
Cow position:
               
chr10:30741497-30741263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
131-418
               

               
Cow position:
               
chr10:33240564-33240845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
131-429
               

               
Cow position:
               
chr10:16683688-16683991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 269
               

               
Conread position:
               
131-435
               

               
Cow position:
               
chr10:29689215-29689503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
131-441
               

               
Cow position:
               
chr10:67288407-67288104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 90
               

               
Conread position:
               
131-447
               

               
Cow position:
               
chr10:35778786-35779097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
131-473
               

               
Cow position:
               
chr10:52589563-52589919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 271
               

               
Conread position:
               
131-484
               

               
Cow position:
               
chr10:48255106-48255461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr10:10135104-10134732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
131-498
               

               
Cow position:
               
chr10:36002316-36001952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr10:23096658-23097019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 241
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr10:32584030-32583662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr10:47789137-47788790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr10:59588066-59588421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
131-501
               

               
Cow position:
               
chr10:54477213-54476857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr10:45606317-45606667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr10:56180677-56180475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
133-440
               

               
Cow position:
               
chr10:47651413-47651113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
133-491
               

               
Cow position:
               
chr10:6530299-6529954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
287, 34
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr10:9341620-9341991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr10:24732417-24732056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 20
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr10:26209133-26209515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 146
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr10:29919724-29920086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 170
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr10:59663856-59664217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
133-501
               

               
Cow position:
               
chr10:22472439-22472060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 209
               

               
Conread position:
               
134-322
               

               
Cow position:
               
chr10:24902871-24903062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
134-432
               

               
Cow position:
               
chr10:36290942-36290654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
292, 123
               

               
Conread position:
               
136-254
               

               
Cow position:
               
chr10:37442653-37442536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
136-298
               

               
Cow position:
               
chr10:13927845-13927684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
136-300
               

               
Cow position:
               
chr10:23923122-23922955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
136-301
               

               
Cow position:
               
chr10:31798294-31798453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
136-332
               

               
Cow position:
               
chr10:25185017-25184815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
136-332
               

               
Cow position:
               
chr10:33311375-33311558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
136-336
               

               
Cow position:
               
chr10:35893795-35893997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
170, 57
               

               
Conread position:
               
136-417
               

               
Cow position:
               
chr10:2538199-2537928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
136-436
               

               
Cow position:
               
chr10:24375655-24375367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
136-440
               

               
Cow position:
               
chr10:55801414-55801106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
158, 124
               

               
Conread position:
               
136-478
               

               
Cow position:
               
chr10:37913076-37913417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
136-487
               

               
Cow position:
               
chr10:50609665-50609297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
136-489
               

               
Cow position:
               
chr10:668977-668639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
136-490
               

               
Cow position:
               
chr10:27749779-27749431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 55
               

               
Conread position:
               
136-492
               

               
Cow position:
               
chr10:22049366-22049007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
136-492
               

               
Cow position:
               
chr10:22396364-22396009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 101
               

               
Conread position:
               
136-492
               

               
Cow position:
               
chr10:51696854-51696507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
136-499
               

               
Cow position:
               
chr10:15115728-15115362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 174
               

               
Conread position:
               
136-499
               

               
Cow position:
               
chr10:67581396-67581037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 203
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr10:11213222-11212858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 28
               

               
Conread position:
               
137-271
               

               
Cow position:
               
chr10:13158226-13158091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
137-300
               

               
Cow position:
               
chr10:15225070-15224913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
137-302
               

               
Cow position:
               
chr10:32573842-32573672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
137-492
               

               
Cow position:
               
chr10:31779158-31779514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 255
               

               
Conread position:
               
137-500
               

               
Cow position:
               
chr10:20132418-20132781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 157
               

               
Conread position:
               
137-500
               

               
Cow position:
               
chr10:39109907-39110248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
137-500
               

               
Cow position:
               
chr10:56683098-56683454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
137-500
               

               
Cow position:
               
chr10:58935057-58935444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr10:9083410-9083045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr10:20997179-20997530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 9
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr10:61839692-61839346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 64
               

               
Conread position:
               
139-305
               

               
Cow position:
               
chr10:51223021-51223187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-368
               

               
Cow position:
               
chr10:15426975-15427186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr10:9578850-9579108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 172
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr10:69997692-69997943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
139-500
               

               
Cow position:
               
chr10:29252272-29251908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 84
               

               
Conread position:
               
140-334
               

               
Cow position:
               
chr10:28429397-28429583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
143-256
               

               
Cow position:
               
chr10:65359810-65359695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
143-296
               

               
Cow position:
               
chr10:33369887-33369739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr10:29526800-29526999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
144-362
               

               
Cow position:
               
chr10:40170547-40170320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 164
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr10:44783452-44783087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 164
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr10:50015893-50016246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 182
               

               
Conread position:
               
145-392
               

               
Cow position:
               
chr10:33116849-33117095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
228, 86
               

               
Conread position:
               
146-300
               

               
Cow position:
               
chr10:67260430-67260579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
146-425
               

               
Cow position:
               
chr10:4164371-4164093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 240
               

               
Conread position:
               
149-300
               

               
Cow position:
               
chr10:31400273-31400121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr10:24132726-24133074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 88
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr10:35752865-35753214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 74
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr10:59843811-59844177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 150
               

               
Conread position:
               
151-348
               

               
Cow position:
               
chr10:17925975-17926178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 158
               

               
Conread position:
               
151-424
               

               
Cow position:
               
chr10:55621758-55622019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
151-440
               

               
Cow position:
               
chr10:22433812-22434109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
151-492
               

               
Cow position:
               
chr10:17176129-17175788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr10:2849445-2849100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 71
               

               
Conread position:
               
152-500
               

               
Cow position:
               
chr10:53674919-53674569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
155-353
               

               
Cow position:
               
chr10:65558602-65558800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
135, 128
               

               
Conread position:
               
155-389
               

               
Cow position:
               
chr10:22480378-22480161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
155-392
               

               
Cow position:
               
chr10:69216455-69216233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
155-487
               

               
Cow position:
               
chr10:51861986-51862309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
311, 152
               

               
Conread position:
               
155-492
               

               
Cow position:
               
chr10:59675162-59675499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 142
               

               
Conread position:
               
155-499
               

               
Cow position:
               
chr10:20897380-20897050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
274, 60
               

               
Conread position:
               
155-499
               

               
Cow position:
               
chr10:37668064-37668413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 34
               

               
Conread position:
               
155-500
               

               
Cow position:
               
chr10:22567358-22567692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 60
               

               
Conread position:
               
156-297
               

               
Cow position:
               
chr10:58285715-58285849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
156-336
               

               
Cow position:
               
chr10:49472425-49472606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
145, 21
               

               
Conread position:
               
156-343
               

               
Cow position:
               
chr10:52167268-52167084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
156-383
               

               
Cow position:
               
chr10:52069392-52069618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
156-432
               

               
Cow position:
               
chr10:19549396-19549670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
156-493
               

               
Cow position:
               
chr10:40906405-40906064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr10:12315238-12314915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr10:19704422-19704756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr10:21447818-21448147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 149
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr10:28104988-28105326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 236
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr10:28670726-28671076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 187
               

               
Conread position:
               
157-286
               

               
Cow position:
               
chr10:38322199-38322327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 93
               

               
Conread position:
               
157-302
               

               
Cow position:
               
chr10:25529101-25529250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
157-364
               

               
Cow position:
               
chr10:66311300-66311097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 59
               

               
Conread position:
               
157-441
               

               
Cow position:
               
chr10:58612551-58612808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
266, 41
               

               
Conread position:
               
157-486
               

               
Cow position:
               
chr10:6038249-6038575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
157-486
               

               
Cow position:
               
chr10:29279536-29279202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 115
               

               
Conread position:
               
157-499
               

               
Cow position:
               
chr10:27828411-27828086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
157-499
               

               
Cow position:
               
chr10:30449973-30450311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
157-500
               

               
Cow position:
               
chr10:28038843-28039186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 235
               

               
Conread position:
               
157-500
               

               
Cow position:
               
chr10:59151774-59152117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 140
               

               
Conread position:
               
157-500
               

               
Cow position:
               
chr10:68829194-68829520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
157-501
               

               
Cow position:
               
chr10:23948829-23949174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
158-272
               

               
Cow position:
               
chr10:890052-889938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-294
               

               
Cow position:
               
chr10:48898755-48898619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-299
               

               
Cow position:
               
chr10:17765880-17766024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
158-300
               

               
Cow position:
               
chr10:58736876-58737009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
158-304
               

               
Cow position:
               
chr10:40535115-40535263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 134
               

               
Conread position:
               
158-336
               

               
Cow position:
               
chr10:24980928-24981103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
158-343
               

               
Cow position:
               
chr10:54819355-54819171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
151, 78
               

               
Conread position:
               
158-375
               

               
Cow position:
               
chr10:12100454-12100675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
158-386
               

               
Cow position:
               
chr10:6768634-6768846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
158-387
               

               
Cow position:
               
chr10:13316028-13315803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
137, 172
               

               
Conread position:
               
158-401
               

               
Cow position:
               
chr10:22633536-22633775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
180, 155
               

               
Conread position:
               
158-427
               

               
Cow position:
               
chr10:38376570-38376829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
261, 16
               

               
Conread position:
               
158-436
               

               
Cow position:
               
chr10:29339307-29339570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
147, 101
               

               
Conread position:
               
158-447
               

               
Cow position:
               
chr10:37173357-37173645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 165
               

               
Conread position:
               
158-447
               

               
Cow position:
               
chr10:51942878-51942595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 95
               

               
Conread position:
               
158-488
               

               
Cow position:
               
chr10:30440957-30441287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
227, 128
               

               
Conread position:
               
158-489
               

               
Cow position:
               
chr10:17863675-17863341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 201
               

               
Conread position:
               
158-492
               

               
Cow position:
               
chr10:1088105-1087773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 9
               

               
Conread position:
               
158-498
               

               
Cow position:
               
chr10:15293355-15293020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 144
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr10:10043017-10043347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr10:3998999-3998651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 237
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr10:6642979-6642626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 249
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr10:8077072-8077405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
207, 46
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr10:30455741-30456109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 344
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr10:31791170-31791513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 105
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr10:52113584-52113919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 69
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr10:65133033-65132705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 64
               

               
Conread position:
               
159-311
               

               
Cow position:
               
chr10:29349702-29349548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
159-392
               

               
Cow position:
               
chr10:64721918-64722149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
211, 57
               

               
Conread position:
               
159-450
               

               
Cow position:
               
chr10:50134716-50135006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
159-499
               

               
Cow position:
               
chr10:24745208-24744875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 90
               

               
Conread position:
               
159-499
               

               
Cow position:
               
chr10:41984799-41985140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
159-500
               

               
Cow position:
               
chr10:31374002-31374360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
159-500
               

               
Cow position:
               
chr10:53357984-53357642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
160-300
               

               
Cow position:
               
chr10:58148846-58148976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
160-437
               

               
Cow position:
               
chr10:64838941-64839202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
160-500
               

               
Cow position:
               
chr10:49045926-49045590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 70
               

               
Conread position:
               
161-408
               

               
Cow position:
               
chr10:66593014-66593260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
161-465
               

               
Cow position:
               
chr10:46184826-46184541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
152, 77
               

               
Conread position:
               
161-479
               

               
Cow position:
               
chr10:38513261-38512941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 51
               

               
Conread position:
               
161-499
               

               
Cow position:
               
chr10:34660156-34660472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
161-500
               

               
Cow position:
               
chr10:1749671-1749321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 77
               

               
Conread position:
               
162-500
               

               
Cow position:
               
chr10:65423819-65424165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 19
               

               
Conread position:
               
163-271
               

               
Cow position:
               
chr10:7493516-7493624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
163-336
               

               
Cow position:
               
chr10:17293347-17293522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
163-492
               

               
Cow position:
               
chr10:22527817-22528147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 164
               

               
Conread position:
               
163-495
               

               
Cow position:
               
chr10:53973926-53973595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 74
               

               
Conread position:
               
163-500
               

               
Cow position:
               
chr10:23936561-23936229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 75
               

               
Conread position:
               
165-343
               

               
Cow position:
               
chr10:517365-517196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
166-371
               

               
Cow position:
               
chr10:10026431-10026233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
200, 130
               

               
Conread position:
               
166-435
               

               
Cow position:
               
chr10:48573598-48573876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
132, 175
               

               
Conread position:
               
166-490
               

               
Cow position:
               
chr10:22321604-22321275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 147
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr10:11221784-11221456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 100
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr10:24763564-24763224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 52
               

               
Conread position:
               
167-467
               

               
Cow position:
               
chr10:55930278-55929976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 176
               

               
Conread position:
               
167-500
               

               
Cow position:
               
chr10:13390967-13391307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 160
               

               
Conread position:
               
167-500
               

               
Cow position:
               
chr10:36896485-36896151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 83
               

               
Conread position:
               
168-489
               

               
Cow position:
               
chr10:57404854-57405178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
168-500
               

               
Cow position:
               
chr10:53934673-53934993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 82
               

               
Conread position:
               
169-373
               

               
Cow position:
               
chr10:36107339-36107542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
169-388
               

               
Cow position:
               
chr10:533610-533390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
169-500
               

               
Cow position:
               
chr10:8923358-8923020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
170-472
               

               
Cow position:
               
chr10:46492917-46493229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
170-477
               

               
Cow position:
               
chr10:47412029-47412339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 67
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr10:1070070-1070325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
173-326
               

               
Cow position:
               
chr10:48282477-48282632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
174-410
               

               
Cow position:
               
chr10:21015914-21016149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
140, 128
               

               
Conread position:
               
174-414
               

               
Cow position:
               
chr10:39586783-39587023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
174-436
               

               
Cow position:
               
chr10:45679089-45678831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
215, 33
               

               
Conread position:
               
177-499
               

               
Cow position:
               
chr10:35887326-35887659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
177-500
               

               
Cow position:
               
chr10:21462312-21461987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
180-498
               

               
Cow position:
               
chr10:65749019-65748706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
181-447
               

               
Cow position:
               
chr10:8219352-8219090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
182-354
               

               
Cow position:
               
chr10:22360041-22360209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
184-437
               

               
Cow position:
               
chr10:42892907-42893151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
184-457
               

               
Cow position:
               
chr10:13617590-13617851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
184-491
               

               
Cow position:
               
chr10:29588776-29589085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 118
               

               
Conread position:
               
184-500
               

               
Cow position:
               
chr10:38725718-38725406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
185-499
               

               
Cow position:
               
chr10:28623619-28623332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr10:49038647-49038307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
186-500
               

               
Cow position:
               
chr10:49569258-49568951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
187-466
               

               
Cow position:
               
chr10:41254513-41254782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
187-491
               

               
Cow position:
               
chr10:24307863-24308148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
187-500
               

               
Cow position:
               
chr10:51314067-51313736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
189-500
               

               
Cow position:
               
chr10:53084228-53083911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
190-486
               

               
Cow position:
               
chr10:13163391-13163687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
218, 106
               

               
Conread position:
               
194-500
               

               
Cow position:
               
chr10:24548303-24548004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
196-500
               

               
Cow position:
               
chr10:29070209-29069902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
198-497
               

               
Cow position:
               
chr10:1428089-1427790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
203-501
               

               
Cow position:
               
chr10:66211246-66211553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 117
               

               
Conread position:
               
206-492
               

               
Cow position:
               
chr10:39268636-39268350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
214, 46
               

               
Conread position:
               
208-487
               

               
Cow position:
               
chr10:67020662-67020386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
157, 80
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr10:15462531-15462245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 183
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr10:35767050-35767332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr10:43287833-43288123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
209-500
               

               
Cow position:
               
chr10:12919318-12919595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
210-487
               

               
Cow position:
               
chr10:58399243-58399512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 184
               

               
Conread position:
               
211-492
               

               
Cow position:
               
chr10:32029796-32030070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
214-388
               

               
Cow position:
               
chr10:55518758-55518577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
215-459
               

               
Cow position:
               
chr10:39303814-39304065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 178
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr10:9444801-9444981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
216-500
               

               
Cow position:
               
chr10:19655937-19655655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 106
               

               
Conread position:
               
218-483
               

               
Cow position:
               
chr10:25882441-25882189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
220, 20
               

               
Conread position:
               
218-499
               

               
Cow position:
               
chr10:61305293-61305028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
219, 12
               

               
Conread position:
               
221-396
               

               
Cow position:
               
chr10:331407-331230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
221-500
               

               
Cow position:
               
chr10:67717010-67716730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
215, 70
               

               
Conread position:
               
222-500
               

               
Cow position:
               
chr10:34906738-34906455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
224-500
               

               
Cow position:
               
chr10:35857038-35857308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 77
               

               
Conread position:
               
231-424
               

               
Cow position:
               
chr10:35856340-35856523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
231-467
               

               
Cow position:
               
chr10:31000569-31000822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
231-500
               

               
Cow position:
               
chr10:6173374-6173106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 109
               

               
Conread position:
               
232-500
               

               
Cow position:
               
chr10:17584021-17584283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 170
               

               
Conread position:
               
234-499
               

               
Cow position:
               
chr10:33867385-33867633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
203, 42
               

               
Conread position:
               
237-388
               

               
Cow position:
               
chr10:24866030-24866174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
237-432
               

               
Cow position:
               
chr10:1201941-1201753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
240-409
               

               
Cow position:
               
chr10:46718741-46718905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
240-431
               

               
Cow position:
               
chr10:4484665-4484486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
240-500
               

               
Cow position:
               
chr10:6516174-6516440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 107
               

               
Conread position:
               
241-435
               

               
Cow position:
               
chr10:41794700-41794894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 151
               

               
Conread position:
               
241-499
               

               
Cow position:
               
chr10:21037315-21037053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
241-499
               

               
Cow position:
               
chr10:47165876-47165625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
241-500
               

               
Cow position:
               
chr10:52029632-52029368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
242-500
               

               
Cow position:
               
chr10:11032485-11032751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
242-500
               

               
Cow position:
               
chr10:14787543-14787790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
242-501
               

               
Cow position:
               
chr10:14098316-14098575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
243-491
               

               
Cow position:
               
chr10:41255989-41255744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
243-499
               

               
Cow position:
               
chr10:5607649-5607391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr10:20399206-20398945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr10:32093810-32093549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr10:46801009-46801258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr10:60358731-60358479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
244-447
               

               
Cow position:
               
chr10:36285507-36285304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 149
               

               
Conread position:
               
244-448
               

               
Cow position:
               
chr10:37442311-37442107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 143
               

               
Conread position:
               
244-500
               

               
Cow position:
               
chr10:2191386-2191643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
244-500
               

               
Cow position:
               
chr10:37444214-37444470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 178
               

               
Conread position:
               
244-500
               

               
Cow position:
               
chr10:60032566-60032830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 254
               

               
Conread position:
               
246-477
               

               
Cow position:
               
chr10:38739550-38739321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
246-500
               

               
Cow position:
               
chr10:52175623-52175385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
247-500
               

               
Cow position:
               
chr10:22652701-22652441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
247-500
               

               
Cow position:
               
chr10:57457336-57457078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
248-435
               

               
Cow position:
               
chr10:69272748-69272569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
249-492
               

               
Cow position:
               
chr10:21708903-21709140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
171, 121
               

               
Conread position:
               
250-499
               

               
Cow position:
               
chr10:9798196-9798446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
253-455
               

               
Cow position:
               
chr10:3985423-3985225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
180, 137
               

               
Conread position:
               
254-434
               

               
Cow position:
               
chr10:39140176-39139995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
254-500
               

               
Cow position:
               
chr10:52152522-52152269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr10:18229723-18229951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
166, 46
               

               
Conread position:
               
255-500
               

               
Cow position:
               
chr10:17983176-17982929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
255-500
               

               
Cow position:
               
chr10:31266340-31266582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
255-500
               

               
Cow position:
               
chr10:50200704-50200459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
262-496
               

               
Cow position:
               
chr10:11486991-11487230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
263-371
               

               
Cow position:
               
chr10:7786711-7786602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
263-411
               

               
Cow position:
               
chr10:48367057-48367200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
263-413
               

               
Cow position:
               
chr10:48500081-48499942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
263-446
               

               
Cow position:
               
chr10:37400269-37400086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
263-489
               

               
Cow position:
               
chr10:48388286-48388510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 120
               

               
Conread position:
               
263-491
               

               
Cow position:
               
chr10:20505530-20505294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr10:15294352-15294111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr10:5113560-5113332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
170, 38
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr10:9445034-9445267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr10:20735686-20735454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr10:46227077-46226833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
264-499
               

               
Cow position:
               
chr10:64878004-64878248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
266-419
               

               
Cow position:
               
chr10:5480976-5480815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
266-498
               

               
Cow position:
               
chr10:37528623-37528857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 38
               

               
Conread position:
               
266-498
               

               
Cow position:
               
chr10:54799598-54799366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
166, 42
               

               
Conread position:
               
267-489
               

               
Cow position:
               
chr10:20517252-20517020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
268-499
               

               
Cow position:
               
chr10:24971631-24971852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
40, 115
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr10:14975815-14976046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr10:19402918-19402681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr10:19678853-19678614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr10:25045709-25045936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr10:31812454-31812671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr10:60936920-60936699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 28
               

               
Conread position:
               
270-414
               

               
Cow position:
               
chr10:8321693-8321837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
271-393
               

               
Cow position:
               
chr10:29090715-29090836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
272-397
               

               
Cow position:
               
chr10:58251863-58251987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
275-489
               

               
Cow position:
               
chr10:24755454-24755668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
277-500
               

               
Cow position:
               
chr10:59675635-59675860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
278-500
               

               
Cow position:
               
chr10:24871860-24871635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
280-447
               

               
Cow position:
               
chr10:17699044-17699211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
281-500
               

               
Cow position:
               
chr10:1719558-1719781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
281-500
               

               
Cow position:
               
chr10:35026446-35026226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
152, 105
               

               
Conread position:
               
282-492
               

               
Cow position:
               
chr10:888890-888680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
134, 19
               

               
Conread position:
               
289-500
               

               
Cow position:
               
chr10:34300461-34300253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
154, 14
               

               
Conread position:
               
294-500
               

               
Cow position:
               
chr10:2185283-2185078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
304-440
               

               
Cow position:
               
chr10:65067020-65067155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr10:35796383-35796569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr10:8760193-8760378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr10:48377696-48377899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr10:54936166-54936366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr10:57016202-57016396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr10:7737745-7737537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr10:27362433-27362240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr10:8923881-8923682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
307-486
               

               
Cow position:
               
chr10:38223659-38223840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
308-500
               

               
Cow position:
               
chr10:20447035-20446846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
308-500
               

               
Cow position:
               
chr10:57736221-57736418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
125, 82
               

               
Conread position:
               
312-500
               

               
Cow position:
               
chr10:55097752-55097935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
314-436
               

               
Cow position:
               
chr10:32411838-32411717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
318-492
               

               
Cow position:
               
chr10:16986169-16985993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
321-498
               

               
Cow position:
               
chr10:14639436-14639607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
323-500
               

               
Cow position:
               
chr10:23376537-23376717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
327-478
               

               
Cow position:
               
chr10:2708300-2708146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
328-487
               

               
Cow position:
               
chr10:11609530-11609366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
328-492
               

               
Cow position:
               
chr10:6345998-6345827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
328-492
               

               
Cow position:
               
chr10:39646182-39646350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
336-473
               

               
Cow position:
               
chr10:46172078-46172201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
338-499
               

               
Cow position:
               
chr10:32928677-32928514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
339-472
               

               
Cow position:
               
chr10:30106197-30106328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
347-500
               

               
Cow position:
               
chr10:35715807-35715964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
347-501
               

               
Cow position:
               
chr10:54141796-54141631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
348-500
               

               
Cow position:
               
chr10:28836123-28835976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
36, 0
               
Show alignments to all cow chromosomes.