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Cow genome map

           
Conread name:
           
Utr2-C0001811_G15
        

               
Conread position:
               
3-217
               

               
Cow position:
               
chr18:33364450-33364233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 139
               

               
Conread position:
               
9-492
               

               
Cow position:
               
chr18:30359912-30360374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr18:8219940-8220173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr18:31159042-31159307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
12-299
               

               
Cow position:
               
chr18:35366977-35367253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr18:5600865-5600553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
20-219
               

               
Cow position:
               
chr18:4857503-4857705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
20-270
               

               
Cow position:
               
chr18:24946301-24946056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
23-280
               

               
Cow position:
               
chr18:2108464-2108207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
23-281
               

               
Cow position:
               
chr18:53092798-53093061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
29-280
               

               
Cow position:
               
chr18:23649134-23648880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
30-500
               

               
Cow position:
               
chr18:22120677-22121144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
32-399
               

               
Cow position:
               
chr18:2151770-2151422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
33-389
               

               
Cow position:
               
chr18:24508022-24508389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
33-500
               

               
Cow position:
               
chr18:49200843-49200378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
33-501
               

               
Cow position:
               
chr18:12023434-12023896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
34-269
               

               
Cow position:
               
chr18:41703036-41702806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
34-383
               

               
Cow position:
               
chr18:10213987-10214339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
34-471
               

               
Cow position:
               
chr18:10977008-10977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
35-491
               

               
Cow position:
               
chr18:33502181-33502631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
25, 215
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr18:51405716-51406157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 13
               

               
Conread position:
               
36-330
               

               
Cow position:
               
chr18:21782886-21782602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
36-446
               

               
Cow position:
               
chr18:178832-179234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 207
               

               
Conread position:
               
38-258
               

               
Cow position:
               
chr18:21751584-21751355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
38-295
               

               
Cow position:
               
chr18:38211359-38211104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
38-311
               

               
Cow position:
               
chr18:36229472-36229755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 261
               

               
Conread position:
               
38-412
               

               
Cow position:
               
chr18:30586038-30586390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
38-489
               

               
Cow position:
               
chr18:29080991-29080575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
38-500
               

               
Cow position:
               
chr18:29372069-29371607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
38-500
               

               
Cow position:
               
chr18:29957984-29958409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
39-189
               

               
Cow position:
               
chr18:30295405-30295557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
39-254
               

               
Cow position:
               
chr18:17195147-17195361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
39-256
               

               
Cow position:
               
chr18:4718463-4718241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
39-270
               

               
Cow position:
               
chr18:33757213-33756989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
39-391
               

               
Cow position:
               
chr18:1571040-1571389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr18:6276010-6275554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 126
               

               
Conread position:
               
40-248
               

               
Cow position:
               
chr18:4000550-4000336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
40-392
               

               
Cow position:
               
chr18:728220-727885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
40-500
               

               
Cow position:
               
chr18:9029814-9029356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 268
               

               
Conread position:
               
41-245
               

               
Cow position:
               
chr18:22045210-22045421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 185
               

               
Conread position:
               
41-299
               

               
Cow position:
               
chr18:6818468-6818725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr18:19158075-19157770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
41-453
               

               
Cow position:
               
chr18:12270709-12270296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr18:56157034-56157225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
42-256
               

               
Cow position:
               
chr18:49040408-49040634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
42-441
               

               
Cow position:
               
chr18:859015-858610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
43-224
               

               
Cow position:
               
chr18:35171546-35171362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
43-290
               

               
Cow position:
               
chr18:25757115-25757363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
43-305
               

               
Cow position:
               
chr18:32253313-32253575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr18:21050895-21051079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
44-483
               

               
Cow position:
               
chr18:42431895-42432333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
45-329
               

               
Cow position:
               
chr18:19868064-19868353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
45-351
               

               
Cow position:
               
chr18:20257364-20257659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
129, 254
               

               
Conread position:
               
45-491
               

               
Cow position:
               
chr18:20126488-20126048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
45-499
               

               
Cow position:
               
chr18:52456868-52457315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
45-500
               

               
Cow position:
               
chr18:5766601-5766167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
46-235
               

               
Cow position:
               
chr18:44514283-44514089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
46-343
               

               
Cow position:
               
chr18:22180587-22180888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
47-277
               

               
Cow position:
               
chr18:22328339-22328104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
47-357
               

               
Cow position:
               
chr18:12584652-12584961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
47-382
               

               
Cow position:
               
chr18:23623433-23623775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 265
               

               
Conread position:
               
47-391
               

               
Cow position:
               
chr18:34813842-34813498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
47-397
               

               
Cow position:
               
chr18:19688220-19687864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
47-445
               

               
Cow position:
               
chr18:39811389-39811769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 95
               

               
Conread position:
               
47-500
               

               
Cow position:
               
chr18:4927267-4926812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
51, 158
               

               
Conread position:
               
47-500
               

               
Cow position:
               
chr18:7966436-7966001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
48-219
               

               
Cow position:
               
chr18:6825596-6825780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
48-347
               

               
Cow position:
               
chr18:47486233-47485945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
112, 45
               

               
Conread position:
               
48-404
               

               
Cow position:
               
chr18:25601136-25601480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
48-424
               

               
Cow position:
               
chr18:52478340-52477968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
48-432
               

               
Cow position:
               
chr18:52472694-52472307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
48-436
               

               
Cow position:
               
chr18:44137686-44137300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
57, 193
               

               
Conread position:
               
48-500
               

               
Cow position:
               
chr18:10322988-10322538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
49-219
               

               
Cow position:
               
chr18:29945726-29945551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
49-224
               

               
Cow position:
               
chr18:37690341-37690164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
49-248
               

               
Cow position:
               
chr18:36190809-36191012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
49-252
               

               
Cow position:
               
chr18:27637682-27637478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
49-256
               

               
Cow position:
               
chr18:33492538-33492342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
49-271
               

               
Cow position:
               
chr18:19809492-19809715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
49-284
               

               
Cow position:
               
chr18:45899085-45898846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
49-292
               

               
Cow position:
               
chr18:6075217-6075449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
49-301
               

               
Cow position:
               
chr18:47824584-47824831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
49-312
               

               
Cow position:
               
chr18:40280904-40281177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
49-331
               

               
Cow position:
               
chr18:52647453-52647738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
49-352
               

               
Cow position:
               
chr18:23169773-23169463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 274
               

               
Conread position:
               
49-389
               

               
Cow position:
               
chr18:42290144-42290472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
49-405
               

               
Cow position:
               
chr18:55140365-55140722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 177
               

               
Conread position:
               
49-412
               

               
Cow position:
               
chr18:52684411-52684778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr18:55701471-55701897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
49-496
               

               
Cow position:
               
chr18:52695648-52695207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
49-498
               

               
Cow position:
               
chr18:55505593-55505140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
49-499
               

               
Cow position:
               
chr18:52637334-52637789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 255
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr18:7951304-7950851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
49-500
               

               
Cow position:
               
chr18:12775588-12776035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 280
               

               
Conread position:
               
50-258
               

               
Cow position:
               
chr18:41724628-41724838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
50-298
               

               
Cow position:
               
chr18:31556967-31557220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr18:48242371-48242045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
50-392
               

               
Cow position:
               
chr18:36768624-36768957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
50-398
               

               
Cow position:
               
chr18:30225339-30225701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
50-477
               

               
Cow position:
               
chr18:247505-247923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr18:39875059-39875520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr18:46880518-46880945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
51-269
               

               
Cow position:
               
chr18:49970465-49970684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
51-296
               

               
Cow position:
               
chr18:18844195-18843956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
51-299
               

               
Cow position:
               
chr18:25063642-25063895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
51-301
               

               
Cow position:
               
chr18:18962616-18962362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
51-329
               

               
Cow position:
               
chr18:9756271-9755986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
51-382
               

               
Cow position:
               
chr18:2146404-2146729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
51-389
               

               
Cow position:
               
chr18:42292874-42293200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
51-441
               

               
Cow position:
               
chr18:381112-380742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
51-489
               

               
Cow position:
               
chr18:4495699-4496139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
51-499
               

               
Cow position:
               
chr18:55693008-55692560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
52-252
               

               
Cow position:
               
chr18:16356307-16356500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
52-258
               

               
Cow position:
               
chr18:49161111-49161323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
52-270
               

               
Cow position:
               
chr18:23809935-23810152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr18:16812343-16812066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 232
               

               
Conread position:
               
52-335
               

               
Cow position:
               
chr18:47417189-47416898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr18:20480756-20481050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
52-385
               

               
Cow position:
               
chr18:54130157-54130479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
52-480
               

               
Cow position:
               
chr18:17390804-17391216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
52-491
               

               
Cow position:
               
chr18:51827467-51827042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr18:2270329-2270766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 107
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr18:4668316-4668754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 141
               

               
Conread position:
               
52-500
               

               
Cow position:
               
chr18:4748699-4749145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
53-253
               

               
Cow position:
               
chr18:18688921-18689114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
53-279
               

               
Cow position:
               
chr18:37187811-37188038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
53-500
               

               
Cow position:
               
chr18:14586293-14586738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
53-500
               

               
Cow position:
               
chr18:31672334-31672769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
54-453
               

               
Cow position:
               
chr18:17956191-17956600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 248
               

               
Conread position:
               
54-500
               

               
Cow position:
               
chr18:55759282-55759743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
55-329
               

               
Cow position:
               
chr18:36450084-36449806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
55-417
               

               
Cow position:
               
chr18:51643830-51644201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
53, 242
               

               
Conread position:
               
55-492
               

               
Cow position:
               
chr18:11791106-11790685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
56-231
               

               
Cow position:
               
chr18:4907327-4907154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
56-232
               

               
Cow position:
               
chr18:9642691-9642878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
56-258
               

               
Cow position:
               
chr18:23380310-23380111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
56-265
               

               
Cow position:
               
chr18:45573564-45573353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
56-300
               

               
Cow position:
               
chr18:37189108-37189356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
56-389
               

               
Cow position:
               
chr18:50095226-50095543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
56-499
               

               
Cow position:
               
chr18:10576287-10575847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 109
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr18:20641318-20641747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr18:39662965-39662523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 137
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr18:45903715-45904154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
57-191
               

               
Cow position:
               
chr18:32960262-32960124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
57-231
               

               
Cow position:
               
chr18:10668515-10668340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
57-251
               

               
Cow position:
               
chr18:16382043-16381845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
57-254
               

               
Cow position:
               
chr18:21528831-21528631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
57-254
               

               
Cow position:
               
chr18:56463545-56463746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 158
               

               
Conread position:
               
57-283
               

               
Cow position:
               
chr18:21969618-21969848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
46, 198
               

               
Conread position:
               
57-287
               

               
Cow position:
               
chr18:40063276-40063040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
57-292
               

               
Cow position:
               
chr18:4851300-4851531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
57-313
               

               
Cow position:
               
chr18:48441968-48441712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
57-337
               

               
Cow position:
               
chr18:22568887-22569165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
57-373
               

               
Cow position:
               
chr18:55549915-55549595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 190
               

               
Conread position:
               
57-404
               

               
Cow position:
               
chr18:24266218-24266575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
57-411
               

               
Cow position:
               
chr18:48633959-48633623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
57-440
               

               
Cow position:
               
chr18:23615693-23616079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
57-487
               

               
Cow position:
               
chr18:52463091-52463520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
57-492
               

               
Cow position:
               
chr18:11233604-11233177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
57-499
               

               
Cow position:
               
chr18:13172347-13172783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
57-499
               

               
Cow position:
               
chr18:19143320-19143778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
13, 205
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr18:20865170-20864721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 239
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr18:23446883-23447344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr18:43951011-43950583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
58-213
               

               
Cow position:
               
chr18:4546272-4546428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
58-252
               

               
Cow position:
               
chr18:53954530-53954330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
58-254
               

               
Cow position:
               
chr18:39860595-39860787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
58-256
               

               
Cow position:
               
chr18:39689972-39689769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
58-296
               

               
Cow position:
               
chr18:4649732-4649504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr18:37414786-37415068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr18:5701447-5701153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 206
               

               
Conread position:
               
58-364
               

               
Cow position:
               
chr18:55583605-55583294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 167
               

               
Conread position:
               
58-404
               

               
Cow position:
               
chr18:19641159-19640817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
17, 181
               

               
Conread position:
               
58-486
               

               
Cow position:
               
chr18:21252169-21251738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
58-499
               

               
Cow position:
               
chr18:43283575-43284019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
58-500
               

               
Cow position:
               
chr18:49100204-49100630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
59-267
               

               
Cow position:
               
chr18:11330404-11330190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr18:44917935-44917711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
59-447
               

               
Cow position:
               
chr18:1954400-1954794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
59-490
               

               
Cow position:
               
chr18:39114937-39115396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 353
               

               
Conread position:
               
59-498
               

               
Cow position:
               
chr18:16227742-16227301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 207
               

               
Conread position:
               
59-500
               

               
Cow position:
               
chr18:3115637-3115197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 249
               

               
Conread position:
               
60-213
               

               
Cow position:
               
chr18:10117915-10117765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
61-500
               

               
Cow position:
               
chr18:3158406-3158864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
62-475
               

               
Cow position:
               
chr18:4629223-4628795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
63-500
               

               
Cow position:
               
chr18:30341008-30341424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
64-491
               

               
Cow position:
               
chr18:7956326-7955889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 327
               

               
Conread position:
               
64-500
               

               
Cow position:
               
chr18:47512171-47511733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
65-238
               

               
Cow position:
               
chr18:50004531-50004705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
65-388
               

               
Cow position:
               
chr18:16039923-16040237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
199, 68
               

               
Conread position:
               
65-435
               

               
Cow position:
               
chr18:7109307-7108932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
65-447
               

               
Cow position:
               
chr18:305890-306264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
66-255
               

               
Cow position:
               
chr18:35950220-35950018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
66-258
               

               
Cow position:
               
chr18:30786904-30786720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
171, 42
               

               
Conread position:
               
66-261
               

               
Cow position:
               
chr18:14871431-14871632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr18:4066487-4066271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
66-298
               

               
Cow position:
               
chr18:52251680-52251917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
66-358
               

               
Cow position:
               
chr18:49267807-49268108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 265
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr18:33883954-33883663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 174
               

               
Conread position:
               
66-492
               

               
Cow position:
               
chr18:28657744-28658168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
66-498
               

               
Cow position:
               
chr18:45104256-45104707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
67-226
               

               
Cow position:
               
chr18:55039777-55039629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
67-234
               

               
Cow position:
               
chr18:36098531-36098370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
67-236
               

               
Cow position:
               
chr18:36500909-36501076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
67-238
               

               
Cow position:
               
chr18:47175205-47175381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr18:35786226-35786036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr18:39460389-39460200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
67-258
               

               
Cow position:
               
chr18:49602870-49603063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
67-268
               

               
Cow position:
               
chr18:3518428-3518238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
67-268
               

               
Cow position:
               
chr18:4772816-4773019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr18:20998238-20998447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-269
               

               
Cow position:
               
chr18:52383080-52382873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
67-270
               

               
Cow position:
               
chr18:8208251-8208457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
67-271
               

               
Cow position:
               
chr18:45186049-45185838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
67-275
               

               
Cow position:
               
chr18:23898585-23898382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr18:50632269-50632491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
67-291
               

               
Cow position:
               
chr18:14172040-14172260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
67-297
               

               
Cow position:
               
chr18:23941443-23941682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 200
               

               
Conread position:
               
67-298
               

               
Cow position:
               
chr18:46879988-46880229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr18:19765359-19765127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr18:52414139-52413903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr18:14225561-14225328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
218, 86
               

               
Conread position:
               
67-308
               

               
Cow position:
               
chr18:7963951-7963711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
67-311
               

               
Cow position:
               
chr18:51383227-51383468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr18:24719482-24719239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr18:27388768-27388507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
67-336
               

               
Cow position:
               
chr18:38523823-38523575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
67-343
               

               
Cow position:
               
chr18:25281739-25281995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
67-351
               

               
Cow position:
               
chr18:43796786-43797065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
67-365
               

               
Cow position:
               
chr18:23630442-23630725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
67-390
               

               
Cow position:
               
chr18:29474911-29474590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr18:5632438-5632113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
67-394
               

               
Cow position:
               
chr18:6005328-6005648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
67-397
               

               
Cow position:
               
chr18:35664067-35663738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 253
               

               
Conread position:
               
67-431
               

               
Cow position:
               
chr18:46276126-46276498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 222
               

               
Conread position:
               
67-447
               

               
Cow position:
               
chr18:3212053-3211668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 332
               

               
Conread position:
               
67-448
               

               
Cow position:
               
chr18:39623977-39623593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 242
               

               
Conread position:
               
67-462
               

               
Cow position:
               
chr18:3209891-3209490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
67-471
               

               
Cow position:
               
chr18:33896241-33896656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 318
               

               
Conread position:
               
67-477
               

               
Cow position:
               
chr18:18592637-18592233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 41
               

               
Conread position:
               
67-482
               

               
Cow position:
               
chr18:33504090-33504499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
194, 38
               

               
Conread position:
               
67-486
               

               
Cow position:
               
chr18:26354868-26355281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
67-486
               

               
Cow position:
               
chr18:32883465-32883053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 41
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr18:11779826-11779413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr18:52454632-52455055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 249
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr18:12117680-12118098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr18:6609674-6610118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr18:9974158-9974587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr18:31724704-31725149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr18:35453102-35452681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 239
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr18:47525564-47525145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:1586603-1587051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:3044630-3044170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 190
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:7487408-7486990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 125
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:7965405-7964969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:19849598-19850013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:21195175-21195600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:22789917-22790337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:27079040-27078587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 166
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:29065219-29065635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
234, 52
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:37023364-37023819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 264
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr18:55553146-55552703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 243
               

               
Conread position:
               
67-501
               

               
Cow position:
               
chr18:51655877-51656316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
68-219
               

               
Cow position:
               
chr18:42967277-42967131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
68-239
               

               
Cow position:
               
chr18:44044168-44044344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
68-247
               

               
Cow position:
               
chr18:35857752-35857933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
68-247
               

               
Cow position:
               
chr18:44774107-44773922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
68-256
               

               
Cow position:
               
chr18:49280891-49281081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
68-258
               

               
Cow position:
               
chr18:21562751-21562946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
68-258
               

               
Cow position:
               
chr18:36826304-36826117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
68-296
               

               
Cow position:
               
chr18:2773213-2773450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 173
               

               
Conread position:
               
68-296
               

               
Cow position:
               
chr18:2776716-2776953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 173
               

               
Conread position:
               
68-305
               

               
Cow position:
               
chr18:44909224-44908986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr18:45558314-45558069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
68-346
               

               
Cow position:
               
chr18:47392581-47392294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
68-356
               

               
Cow position:
               
chr18:35534978-35535267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
240, 95
               

               
Conread position:
               
68-360
               

               
Cow position:
               
chr18:50959660-50959365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
68-399
               

               
Cow position:
               
chr18:20462535-20462851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
68-413
               

               
Cow position:
               
chr18:51643197-51643541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
68-439
               

               
Cow position:
               
chr18:5072245-5072608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
68-461
               

               
Cow position:
               
chr18:2619034-2619420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
44, 244
               

               
Conread position:
               
68-492
               

               
Cow position:
               
chr18:22055688-22056108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 327
               

               
Conread position:
               
68-497
               

               
Cow position:
               
chr18:9010875-9010472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr18:12059165-12058755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr18:19193198-19193612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr18:51757267-51756835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr18:51395723-51395913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
69-271
               

               
Cow position:
               
chr18:34490452-34490247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
69-290
               

               
Cow position:
               
chr18:11657830-11657603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
69-296
               

               
Cow position:
               
chr18:51192577-51192798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
69-298
               

               
Cow position:
               
chr18:47125241-47125460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
69-317
               

               
Cow position:
               
chr18:29319892-29319654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-344
               

               
Cow position:
               
chr18:25598062-25598346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr18:46647001-46647258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
69-405
               

               
Cow position:
               
chr18:55714496-55714834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
69-419
               

               
Cow position:
               
chr18:43555342-43555702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 242
               

               
Conread position:
               
69-447
               

               
Cow position:
               
chr18:7414863-7415233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
69-485
               

               
Cow position:
               
chr18:28793909-28794313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
69-486
               

               
Cow position:
               
chr18:43806624-43806203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
69-486
               

               
Cow position:
               
chr18:55499241-55498814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
69-491
               

               
Cow position:
               
chr18:52459683-52460111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr18:11867509-11867093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr18:16043978-16044408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
69-492
               

               
Cow position:
               
chr18:28101805-28101372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr18:3180581-3180158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr18:3422858-3422458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr18:5189521-5189943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr18:15613693-15614110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr18:44262793-44262360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
69-500
               

               
Cow position:
               
chr18:50382420-50381995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
70-295
               

               
Cow position:
               
chr18:16052548-16052769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
70-300
               

               
Cow position:
               
chr18:47693224-47693004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
70-314
               

               
Cow position:
               
chr18:5647978-5647736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
70-343
               

               
Cow position:
               
chr18:10065349-10065633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
70-363
               

               
Cow position:
               
chr18:23163063-23162769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
70-500
               

               
Cow position:
               
chr18:18918793-18919215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
70-500
               

               
Cow position:
               
chr18:39001643-39002056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
71-300
               

               
Cow position:
               
chr18:16659259-16659494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
71-358
               

               
Cow position:
               
chr18:1931290-1931573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
71-368
               

               
Cow position:
               
chr18:10051915-10051603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 192
               

               
Conread position:
               
71-387
               

               
Cow position:
               
chr18:5078618-5078925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 34
               

               
Conread position:
               
71-404
               

               
Cow position:
               
chr18:4555995-4556331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
71-420
               

               
Cow position:
               
chr18:55747857-55747505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
71-451
               

               
Cow position:
               
chr18:52171035-52170668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
71-492
               

               
Cow position:
               
chr18:9089860-9089448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 66
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr18:20270842-20271282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
72-229
               

               
Cow position:
               
chr18:2576525-2576691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
72-235
               

               
Cow position:
               
chr18:3412532-3412364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
72-241
               

               
Cow position:
               
chr18:49441011-49440838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
72-253
               

               
Cow position:
               
chr18:641147-641338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
72-258
               

               
Cow position:
               
chr18:19961967-19962163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 191
               

               
Conread position:
               
72-282
               

               
Cow position:
               
chr18:31727476-31727699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
72-299
               

               
Cow position:
               
chr18:38937988-38937761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
72-299
               

               
Cow position:
               
chr18:54513286-54513055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr18:31082175-31082410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr18:35888920-35889157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr18:56183332-56183565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
72-304
               

               
Cow position:
               
chr18:135492-135719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
72-351
               

               
Cow position:
               
chr18:42212612-42212333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
72-357
               

               
Cow position:
               
chr18:35444973-35445249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
72-368
               

               
Cow position:
               
chr18:4489734-4490024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
72-368
               

               
Cow position:
               
chr18:37303322-37303016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
72-384
               

               
Cow position:
               
chr18:11907369-11907051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 80
               

               
Conread position:
               
72-387
               

               
Cow position:
               
chr18:4264228-4264538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
72-419
               

               
Cow position:
               
chr18:9066868-9066521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
72-462
               

               
Cow position:
               
chr18:10891679-10891302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
72-491
               

               
Cow position:
               
chr18:42431446-42431861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
72-492
               

               
Cow position:
               
chr18:11691238-11691666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr18:1144024-1144456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 82
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr18:9366090-9365650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 187
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr18:38985859-38985425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 81
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr18:46048922-46048499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 226
               

               
Conread position:
               
72-500
               

               
Cow position:
               
chr18:46452715-46453140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
73-234
               

               
Cow position:
               
chr18:15351561-15351726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
73-257
               

               
Cow position:
               
chr18:2144737-2144552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
73-301
               

               
Cow position:
               
chr18:32600221-32599989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr18:50359492-50359257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
73-331
               

               
Cow position:
               
chr18:20317896-20318135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
73-366
               

               
Cow position:
               
chr18:42988138-42988439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 230
               

               
Conread position:
               
73-368
               

               
Cow position:
               
chr18:53053062-53053369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
32, 293
               

               
Conread position:
               
73-378
               

               
Cow position:
               
chr18:38669656-38669942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
73-476
               

               
Cow position:
               
chr18:23652946-23653360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
73-476
               

               
Cow position:
               
chr18:56155683-56155262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
73-477
               

               
Cow position:
               
chr18:12242444-12242041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
73-491
               

               
Cow position:
               
chr18:36264614-36265040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr18:2591993-2592435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 174
               

               
Conread position:
               
73-500
               

               
Cow position:
               
chr18:56181291-56181717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
74-224
               

               
Cow position:
               
chr18:35235854-35236009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
74-227
               

               
Cow position:
               
chr18:34389215-34389372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
74-276
               

               
Cow position:
               
chr18:237947-238153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 200
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr18:45622636-45622869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
74-387
               

               
Cow position:
               
chr18:49038620-49038314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
227, 31
               

               
Conread position:
               
74-414
               

               
Cow position:
               
chr18:50974122-50974468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 248
               

               
Conread position:
               
74-474
               

               
Cow position:
               
chr18:42479414-42479828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 324
               

               
Conread position:
               
74-485
               

               
Cow position:
               
chr18:48713708-48713306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr18:12113202-12113629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
75-254
               

               
Cow position:
               
chr18:39710280-39710090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
75-440
               

               
Cow position:
               
chr18:18961667-18962035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
76-300
               

               
Cow position:
               
chr18:6399458-6399694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
76-487
               

               
Cow position:
               
chr18:7945804-7945386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
77-235
               

               
Cow position:
               
chr18:21143805-21143960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
77-256
               

               
Cow position:
               
chr18:697056-697235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 132
               

               
Conread position:
               
77-270
               

               
Cow position:
               
chr18:18664202-18664405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
77-301
               

               
Cow position:
               
chr18:42427779-42427558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
77-414
               

               
Cow position:
               
chr18:7134444-7134114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
28, 188
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr18:20173974-20174392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
77-500
               

               
Cow position:
               
chr18:40759384-40758953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 237
               

               
Conread position:
               
78-224
               

               
Cow position:
               
chr18:10757895-10758041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
78-236
               

               
Cow position:
               
chr18:49126862-49127015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
78-261
               

               
Cow position:
               
chr18:50612354-50612554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
78-285
               

               
Cow position:
               
chr18:39168692-39168485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
78-300
               

               
Cow position:
               
chr18:47547820-47548048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
78-498
               

               
Cow position:
               
chr18:33159105-33158703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
79-287
               

               
Cow position:
               
chr18:19796756-19796972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
79-382
               

               
Cow position:
               
chr18:34219745-34220061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 242
               

               
Conread position:
               
79-447
               

               
Cow position:
               
chr18:32430436-32430785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
79-491
               

               
Cow position:
               
chr18:4757872-4758281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
79-498
               

               
Cow position:
               
chr18:55788832-55789252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 166
               

               
Conread position:
               
80-224
               

               
Cow position:
               
chr18:28539950-28540098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
82-270
               

               
Cow position:
               
chr18:4715453-4715643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
83-333
               

               
Cow position:
               
chr18:49015273-49015032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
83-493
               

               
Cow position:
               
chr18:3193866-3193462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
19, 214
               

               
Conread position:
               
85-403
               

               
Cow position:
               
chr18:35874233-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
87-229
               

               
Cow position:
               
chr18:51711596-51711740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
87-298
               

               
Cow position:
               
chr18:48112813-48113024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
87-300
               

               
Cow position:
               
chr18:55470981-55470771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
87-304
               

               
Cow position:
               
chr18:40047351-40047564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
87-308
               

               
Cow position:
               
chr18:43014717-43014930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
87-382
               

               
Cow position:
               
chr18:49841436-49841136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
87-431
               

               
Cow position:
               
chr18:12273807-12273464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
87-469
               

               
Cow position:
               
chr18:1392416-1392787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
16, 226
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr18:26999042-26998602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 202
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr18:42747751-42747333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 163
               

               
Conread position:
               
88-235
               

               
Cow position:
               
chr18:47306752-47306904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
88-258
               

               
Cow position:
               
chr18:3097873-3098052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
88-260
               

               
Cow position:
               
chr18:24022767-24022596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
88-272
               

               
Cow position:
               
chr18:47872185-47872007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr18:55777968-55777771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr18:47565967-47565769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr18:53642598-53642862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
88-486
               

               
Cow position:
               
chr18:55710178-55709792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
88-499
               

               
Cow position:
               
chr18:37381939-37382359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
89-256
               

               
Cow position:
               
chr18:26586461-26586632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
89-300
               

               
Cow position:
               
chr18:11754278-11754071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
91-352
               

               
Cow position:
               
chr18:24759510-24759768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
92-300
               

               
Cow position:
               
chr18:47920892-47920678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
93-500
               

               
Cow position:
               
chr18:49655828-49655453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
94-440
               

               
Cow position:
               
chr18:48452208-48451854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
165, 56
               

               
Conread position:
               
101-229
               

               
Cow position:
               
chr18:48594077-48594207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
101-378
               

               
Cow position:
               
chr18:20175058-20175331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
101-388
               

               
Cow position:
               
chr18:30405522-30405811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
68, 223
               

               
Conread position:
               
101-428
               

               
Cow position:
               
chr18:23821693-23822002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
103-327
               

               
Cow position:
               
chr18:7481285-7481065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
103-389
               

               
Cow position:
               
chr18:2774002-2774282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
103-414
               

               
Cow position:
               
chr18:51675950-51676268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
103-485
               

               
Cow position:
               
chr18:50625244-50625608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
103-500
               

               
Cow position:
               
chr18:51691330-51691730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
105-500
               

               
Cow position:
               
chr18:51712586-51712971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
107-336
               

               
Cow position:
               
chr18:48962069-48961837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 202
               

               
Conread position:
               
108-310
               

               
Cow position:
               
chr18:911984-912174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
110-500
               

               
Cow position:
               
chr18:5995598-5995210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
111-459
               

               
Cow position:
               
chr18:3386986-3387339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 336
               

               
Conread position:
               
126-357
               

               
Cow position:
               
chr18:21761425-21761185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
128-457
               

               
Cow position:
               
chr18:39434932-39434604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 34
               

               
Conread position:
               
130-299
               

               
Cow position:
               
chr18:47123345-47123515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
130-305
               

               
Cow position:
               
chr18:38757727-38757906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
130-392
               

               
Cow position:
               
chr18:16997360-16997100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 32
               

               
Conread position:
               
130-424
               

               
Cow position:
               
chr18:36201522-36201808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
184, 26
               

               
Conread position:
               
130-429
               

               
Cow position:
               
chr18:47835934-47835639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
130-437
               

               
Cow position:
               
chr18:19896345-19896651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 32
               

               
Conread position:
               
130-459
               

               
Cow position:
               
chr18:27109183-27109517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
130-472
               

               
Cow position:
               
chr18:43020300-43020624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 15
               

               
Conread position:
               
130-498
               

               
Cow position:
               
chr18:21266616-21266248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 211
               

               
Conread position:
               
130-500
               

               
Cow position:
               
chr18:21768721-21768365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 26
               

               
Conread position:
               
130-500
               

               
Cow position:
               
chr18:28923739-28924093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 166
               

               
Conread position:
               
131-296
               

               
Cow position:
               
chr18:26842989-26843156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
131-430
               

               
Cow position:
               
chr18:22143404-22143724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
131-476
               

               
Cow position:
               
chr18:24855735-24856083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr18:19646284-19645921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr18:38344913-38344544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr18:248706-249065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 134
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr18:20126996-20127365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 204
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr18:42061184-42060817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr18:45961164-45961522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
132-500
               

               
Cow position:
               
chr18:21192307-21192672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chr18:24342947-24342780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
161, 30
               

               
Conread position:
               
133-365
               

               
Cow position:
               
chr18:19883636-19883404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
133-432
               

               
Cow position:
               
chr18:7069736-7069460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
288, 41
               

               
Conread position:
               
134-290
               

               
Cow position:
               
chr18:19433864-19433712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
136-311
               

               
Cow position:
               
chr18:35692956-35692783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
136-364
               

               
Cow position:
               
chr18:4872165-4871949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
214, 66
               

               
Conread position:
               
136-378
               

               
Cow position:
               
chr18:47966826-47967064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
136-465
               

               
Cow position:
               
chr18:51392541-51392873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 104
               

               
Conread position:
               
136-481
               

               
Cow position:
               
chr18:33008168-33007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 82
               

               
Conread position:
               
136-492
               

               
Cow position:
               
chr18:10656540-10656191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
136-492
               

               
Cow position:
               
chr18:48453776-48453439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 79
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr18:7359850-7359472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 164
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr18:25647147-25647512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
136-500
               

               
Cow position:
               
chr18:37002734-37002367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 99
               

               
Conread position:
               
137-268
               

               
Cow position:
               
chr18:49982829-49982700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
137-300
               

               
Cow position:
               
chr18:19788081-19787917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
137-322
               

               
Cow position:
               
chr18:52245308-52245110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
91, 180
               

               
Conread position:
               
137-493
               

               
Cow position:
               
chr18:56166083-56165728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
137-500
               

               
Cow position:
               
chr18:28768470-28768104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
138-350
               

               
Cow position:
               
chr18:21380469-21380674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
138-457
               

               
Cow position:
               
chr18:21102675-21102988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
138-498
               

               
Cow position:
               
chr18:52693556-52693212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
162, 27
               

               
Conread position:
               
139-298
               

               
Cow position:
               
chr18:24529771-24529929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
139-430
               

               
Cow position:
               
chr18:16686240-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
139-492
               

               
Cow position:
               
chr18:29058402-29058750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
48, 88
               

               
Conread position:
               
139-500
               

               
Cow position:
               
chr18:22214587-22214225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 219
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr18:39022345-39022095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr18:4203833-4204107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
244, 87
               

               
Conread position:
               
142-500
               

               
Cow position:
               
chr18:33793786-33793446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 68
               

               
Conread position:
               
144-296
               

               
Cow position:
               
chr18:22170710-22170560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
144-300
               

               
Cow position:
               
chr18:46072557-46072401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-499
               

               
Cow position:
               
chr18:19273002-19273366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 229
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr18:4673398-4673062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 94
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr18:52634975-52635344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 356
               

               
Conread position:
               
145-500
               

               
Cow position:
               
chr18:30794519-30794172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
164, 91
               

               
Conread position:
               
145-500
               

               
Cow position:
               
chr18:34324861-34325222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
146-499
               

               
Cow position:
               
chr18:5711561-5711928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
109, 257
               

               
Conread position:
               
146-500
               

               
Cow position:
               
chr18:17005355-17004988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
150-293
               

               
Cow position:
               
chr18:51867459-51867604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
150-306
               

               
Cow position:
               
chr18:47410631-47410476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
150-411
               

               
Cow position:
               
chr18:51850476-51850729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
150-472
               

               
Cow position:
               
chr18:48828689-48829021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
150-485
               

               
Cow position:
               
chr18:11322684-11322345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 155
               

               
Conread position:
               
150-485
               

               
Cow position:
               
chr18:51443351-51443678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
238, 109
               

               
Conread position:
               
150-492
               

               
Cow position:
               
chr18:56159549-56159211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr18:33157903-33157559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
150-501
               

               
Cow position:
               
chr18:36459019-36458671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr18:35012230-35012568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 154
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr18:47828902-47828585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
154-473
               

               
Cow position:
               
chr18:41004994-41005299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
155-295
               

               
Cow position:
               
chr18:4757489-4757627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
155-330
               

               
Cow position:
               
chr18:44027989-44028158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
155-392
               

               
Cow position:
               
chr18:10898115-10897881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
155-416
               

               
Cow position:
               
chr18:55806551-55806808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
155-449
               

               
Cow position:
               
chr18:51190516-51190794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
155-455
               

               
Cow position:
               
chr18:21740732-21741025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
269, 137
               

               
Conread position:
               
155-501
               

               
Cow position:
               
chr18:7952721-7952383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
156-339
               

               
Cow position:
               
chr18:56301974-56301790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
142, 75
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr18:31711480-31711687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
156-436
               

               
Cow position:
               
chr18:9154970-9154690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
145, 229
               

               
Conread position:
               
156-481
               

               
Cow position:
               
chr18:52855137-52854822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 238
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr18:25282472-25282817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 88
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr18:56171932-56172282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 82
               

               
Conread position:
               
157-301
               

               
Cow position:
               
chr18:30387153-30387300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
157-365
               

               
Cow position:
               
chr18:35360048-35359845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
157-432
               

               
Cow position:
               
chr18:8300098-8299823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
157-489
               

               
Cow position:
               
chr18:31586294-31586616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 92
               

               
Conread position:
               
157-498
               

               
Cow position:
               
chr18:23424999-23424669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
128, 51
               

               
Conread position:
               
157-500
               

               
Cow position:
               
chr18:29796347-29796687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 141
               

               
Conread position:
               
157-500
               

               
Cow position:
               
chr18:32773959-32773617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
158-301
               

               
Cow position:
               
chr18:2549223-2549366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-307
               

               
Cow position:
               
chr18:26458269-26458417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr18:4624070-4624237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
158-417
               

               
Cow position:
               
chr18:56190882-56191147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 84
               

               
Conread position:
               
158-431
               

               
Cow position:
               
chr18:36746179-36746444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 145
               

               
Conread position:
               
158-458
               

               
Cow position:
               
chr18:16049823-16050111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
158-460
               

               
Cow position:
               
chr18:1585033-1585338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 227
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr18:56184015-56183676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
121, 145
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr18:50082177-50082507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
159-330
               

               
Cow position:
               
chr18:24976978-24977157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
159-346
               

               
Cow position:
               
chr18:56044632-56044450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
159-487
               

               
Cow position:
               
chr18:25984498-25984823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 11
               

               
Conread position:
               
160-331
               

               
Cow position:
               
chr18:51212914-51212751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
160-492
               

               
Cow position:
               
chr18:11685060-11684734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 142
               

               
Conread position:
               
160-499
               

               
Cow position:
               
chr18:11377442-11377103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 62
               

               
Conread position:
               
161-498
               

               
Cow position:
               
chr18:4666140-4666472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
162-289
               

               
Cow position:
               
chr18:52003606-52003481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
162-440
               

               
Cow position:
               
chr18:18369286-18369561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
162-499
               

               
Cow position:
               
chr18:44801813-44802146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 140
               

               
Conread position:
               
162-499
               

               
Cow position:
               
chr18:45571088-45570760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 36
               

               
Conread position:
               
165-292
               

               
Cow position:
               
chr18:15301215-15301088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
166-342
               

               
Cow position:
               
chr18:40036064-40035888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
166-347
               

               
Cow position:
               
chr18:1732802-1732969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr18:47183221-47183546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr18:47517133-47517471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr18:50637401-50637725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
167-405
               

               
Cow position:
               
chr18:3370971-3370735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
167-412
               

               
Cow position:
               
chr18:2042416-2042665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
167-440
               

               
Cow position:
               
chr18:54111279-54111021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 163
               

               
Conread position:
               
167-456
               

               
Cow position:
               
chr18:55015439-55015166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
167-477
               

               
Cow position:
               
chr18:55397370-55397066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
134, 30
               

               
Conread position:
               
167-500
               

               
Cow position:
               
chr18:21176259-21175920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
167-500
               

               
Cow position:
               
chr18:33299975-33299635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 219
               

               
Conread position:
               
168-295
               

               
Cow position:
               
chr18:14888361-14888236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
169-300
               

               
Cow position:
               
chr18:1607318-1607192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
169-461
               

               
Cow position:
               
chr18:2863921-2864222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
170-500
               

               
Cow position:
               
chr18:13507673-13507994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 8
               

               
Conread position:
               
171-500
               

               
Cow position:
               
chr18:4182121-4182453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
172-497
               

               
Cow position:
               
chr18:23476621-23476933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 136
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr18:15025741-15025417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr18:29356558-29356892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 219
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr18:51212249-51211919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
175-364
               

               
Cow position:
               
chr18:38996201-38996387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
175-489
               

               
Cow position:
               
chr18:9806485-9806159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
175-500
               

               
Cow position:
               
chr18:21681909-21682235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
177-323
               

               
Cow position:
               
chr18:2098683-2098827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
177-499
               

               
Cow position:
               
chr18:13360115-13359801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 83
               

               
Conread position:
               
178-392
               

               
Cow position:
               
chr18:49659823-49660025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
180-390
               

               
Cow position:
               
chr18:22274783-22274986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
180-436
               

               
Cow position:
               
chr18:33508615-33508869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
118, 65
               

               
Conread position:
               
181-474
               

               
Cow position:
               
chr18:51587487-51587781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
181-500
               

               
Cow position:
               
chr18:11367695-11368025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
182-464
               

               
Cow position:
               
chr18:51500019-51500294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
183-409
               

               
Cow position:
               
chr18:31125173-31125388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
183-446
               

               
Cow position:
               
chr18:36183851-36184108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
246, 67
               

               
Conread position:
               
184-500
               

               
Cow position:
               
chr18:4381347-4381032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
186-500
               

               
Cow position:
               
chr18:55589440-55589737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
188-389
               

               
Cow position:
               
chr18:10117550-10117355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
188-497
               

               
Cow position:
               
chr18:4078844-4078546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
189-417
               

               
Cow position:
               
chr18:4331010-4330779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 140
               

               
Conread position:
               
189-424
               

               
Cow position:
               
chr18:40268651-40268875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
200, 114
               

               
Conread position:
               
190-489
               

               
Cow position:
               
chr18:24957346-24957045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
217, 47
               

               
Conread position:
               
191-432
               

               
Cow position:
               
chr18:36296966-36297223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
191-492
               

               
Cow position:
               
chr18:36098259-36097946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
193-489
               

               
Cow position:
               
chr18:29768966-29768662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
198-499
               

               
Cow position:
               
chr18:35537196-35537490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
199-492
               

               
Cow position:
               
chr18:15880805-15881111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
99, 197
               

               
Conread position:
               
199-500
               

               
Cow position:
               
chr18:35636307-35636612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
201-406
               

               
Cow position:
               
chr18:4952174-4952373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
204-480
               

               
Cow position:
               
chr18:4857853-4858150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 267
               

               
Conread position:
               
205-500
               

               
Cow position:
               
chr18:46436732-46437014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
208-433
               

               
Cow position:
               
chr18:4601987-4602201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr18:14815318-14815597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 29
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr18:55461676-55461969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 114
               

               
Conread position:
               
209-395
               

               
Cow position:
               
chr18:51148047-51148237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
209-476
               

               
Cow position:
               
chr18:7947419-7947147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
107, 77
               

               
Conread position:
               
209-500
               

               
Cow position:
               
chr18:26535478-26535779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 258
               

               
Conread position:
               
212-492
               

               
Cow position:
               
chr18:43065556-43065255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
215-482
               

               
Cow position:
               
chr18:12809878-12809615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
205, 87
               

               
Conread position:
               
215-494
               

               
Cow position:
               
chr18:11832143-11831882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
215-500
               

               
Cow position:
               
chr18:8104916-8105203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr18:47812492-47812266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
216-477
               

               
Cow position:
               
chr18:42966885-42966615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 12
               

               
Conread position:
               
217-498
               

               
Cow position:
               
chr18:219359-219068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
218-500
               

               
Cow position:
               
chr18:14048729-14048451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
224, 132
               

               
Conread position:
               
219-499
               

               
Cow position:
               
chr18:23652601-23652876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 148
               

               
Conread position:
               
221-500
               

               
Cow position:
               
chr18:16417689-16417959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
212, 39
               

               
Conread position:
               
221-500
               

               
Cow position:
               
chr18:32121051-32121324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
228-392
               

               
Cow position:
               
chr18:45396341-45396181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
228-459
               

               
Cow position:
               
chr18:29189024-29188788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
230-462
               

               
Cow position:
               
chr18:47007112-47006877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
230-492
               

               
Cow position:
               
chr18:601168-601427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
232-485
               

               
Cow position:
               
chr18:20481876-20482121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 73
               

               
Conread position:
               
232-489
               

               
Cow position:
               
chr18:36478209-36477944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 161
               

               
Conread position:
               
233-500
               

               
Cow position:
               
chr18:2480661-2480380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
152, 69
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr18:6103093-6103329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
234-500
               

               
Cow position:
               
chr18:4648743-4648997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
152, 65
               

               
Conread position:
               
234-500
               

               
Cow position:
               
chr18:44548908-44549169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chr18:21205364-21205116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
238-500
               

               
Cow position:
               
chr18:26937716-26937470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
240-346
               

               
Cow position:
               
chr18:14779307-14779413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
240-406
               

               
Cow position:
               
chr18:37363797-37363637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
240-417
               

               
Cow position:
               
chr18:200387-200566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
240-492
               

               
Cow position:
               
chr18:267817-268065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
240-499
               

               
Cow position:
               
chr18:28085572-28085311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
148, 114
               

               
Conread position:
               
241-499
               

               
Cow position:
               
chr18:2608728-2608990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
243-397
               

               
Cow position:
               
chr18:44027116-44026968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
243-458
               

               
Cow position:
               
chr18:54056545-54056338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
179, 59
               

               
Conread position:
               
244-428
               

               
Cow position:
               
chr18:21401620-21401805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
244-460
               

               
Cow position:
               
chr18:27637206-27636992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
244-492
               

               
Cow position:
               
chr18:21528397-21528150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
192, 58
               

               
Conread position:
               
244-499
               

               
Cow position:
               
chr18:47873076-47872843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
245-500
               

               
Cow position:
               
chr18:1662724-1662996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
245-500
               

               
Cow position:
               
chr18:10861436-10861680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
140, 181
               

               
Conread position:
               
245-500
               

               
Cow position:
               
chr18:45880043-45880272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
246-378
               

               
Cow position:
               
chr18:39861923-39862053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
246-462
               

               
Cow position:
               
chr18:56463876-56464088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
247-472
               

               
Cow position:
               
chr18:15340453-15340674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
89, 144
               

               
Conread position:
               
248-500
               

               
Cow position:
               
chr18:56150653-56150918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 147
               

               
Conread position:
               
249-461
               

               
Cow position:
               
chr18:14085453-14085238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
250-384
               

               
Cow position:
               
chr18:30295660-30295796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
250-408
               

               
Cow position:
               
chr18:4607682-4607839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
250-499
               

               
Cow position:
               
chr18:1584241-1584473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
250-500
               

               
Cow position:
               
chr18:24022376-24022118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
250-500
               

               
Cow position:
               
chr18:33606619-33606370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
250-500
               

               
Cow position:
               
chr18:47314292-47314556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
250-500
               

               
Cow position:
               
chr18:52632419-52632666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
179, 90
               

               
Conread position:
               
250-500
               

               
Cow position:
               
chr18:54658300-54658040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
251-480
               

               
Cow position:
               
chr18:24945818-24946055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
251-500
               

               
Cow position:
               
chr18:11680711-11680458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 52
               

               
Conread position:
               
252-432
               

               
Cow position:
               
chr18:35886871-35886688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
252-498
               

               
Cow position:
               
chr18:3709022-3708780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 188
               

               
Conread position:
               
255-412
               

               
Cow position:
               
chr18:45185739-45185575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
255-500
               

               
Cow position:
               
chr18:45573091-45572847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
172, 49
               

               
Conread position:
               
256-419
               

               
Cow position:
               
chr18:7970357-7970190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
260-500
               

               
Cow position:
               
chr18:41271064-41270828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
160, 42
               

               
Conread position:
               
260-500
               

               
Cow position:
               
chr18:52658390-52658159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
261-498
               

               
Cow position:
               
chr18:16045019-16045260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
262-436
               

               
Cow position:
               
chr18:18868731-18868553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
263-389
               

               
Cow position:
               
chr18:47124678-47124556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
263-469
               

               
Cow position:
               
chr18:1859243-1859451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
263-477
               

               
Cow position:
               
chr18:28822994-28823208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
263-490
               

               
Cow position:
               
chr18:33756849-33756626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
263-491
               

               
Cow position:
               
chr18:7059198-7058977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
263-492
               

               
Cow position:
               
chr18:3098346-3098568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr18:11166956-11166717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr18:16847670-16847436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr18:19761676-19761436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr18:35827437-35827677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
144, 39
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr18:47868440-47868193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
263-501
               

               
Cow position:
               
chr18:35582120-35582365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
266-407
               

               
Cow position:
               
chr18:28190047-28190176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
266-486
               

               
Cow position:
               
chr18:18562564-18562786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
266-490
               

               
Cow position:
               
chr18:35076365-35076134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
266-500
               

               
Cow position:
               
chr18:49665179-49665414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
266-501
               

               
Cow position:
               
chr18:26586685-26586927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
266-501
               

               
Cow position:
               
chr18:52382676-52382434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 159
               

               
Conread position:
               
268-447
               

               
Cow position:
               
chr18:53962662-53962483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr18:19831280-19831035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr18:49161466-49161718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
270-500
               

               
Cow position:
               
chr18:4316280-4316045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 56
               

               
Conread position:
               
270-500
               

               
Cow position:
               
chr18:10517098-10516883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
272-492
               

               
Cow position:
               
chr18:5247545-5247773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
274-486
               

               
Cow position:
               
chr18:52864343-52864564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
275-489
               

               
Cow position:
               
chr18:51412334-51412122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
194, 91
               

               
Conread position:
               
278-500
               

               
Cow position:
               
chr18:19159012-19159227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
281-468
               

               
Cow position:
               
chr18:55715890-55716078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
281-500
               

               
Cow position:
               
chr18:18957839-18958053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
149, 22
               

               
Conread position:
               
282-492
               

               
Cow position:
               
chr18:26286868-26286657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
138, 107
               

               
Conread position:
               
283-457
               

               
Cow position:
               
chr18:18815712-18815892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
283-489
               

               
Cow position:
               
chr18:48036733-48036527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
289-500
               

               
Cow position:
               
chr18:36445388-36445170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr18:23807937-23808135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr18:33272868-33272683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
305-481
               

               
Cow position:
               
chr18:24636435-24636271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
305-490
               

               
Cow position:
               
chr18:1588677-1588855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
306-500
               

               
Cow position:
               
chr18:47930931-47931122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
307-500
               

               
Cow position:
               
chr18:56167987-56168181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
308-500
               

               
Cow position:
               
chr18:24342549-24342363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
308-500
               

               
Cow position:
               
chr18:35058271-35058078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
112, 83
               

               
Conread position:
               
313-498
               

               
Cow position:
               
chr18:9818765-9818575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
317-500
               

               
Cow position:
               
chr18:27388476-27388287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
321-491
               

               
Cow position:
               
chr18:5647167-5646993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
321-497
               

               
Cow position:
               
chr18:4624512-4624689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
321-500
               

               
Cow position:
               
chr18:2099430-2099615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
323-500
               

               
Cow position:
               
chr18:21773414-21773227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
324-494
               

               
Cow position:
               
chr18:238427-238600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
326-482
               

               
Cow position:
               
chr18:35908538-35908379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
328-497
               

               
Cow position:
               
chr18:56192679-56192849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
328-500
               

               
Cow position:
               
chr18:4529422-4529259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
330-500
               

               
Cow position:
               
chr18:32244110-32244277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
340-500
               

               
Cow position:
               
chr18:21721377-21721542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
342-490
               

               
Cow position:
               
chr18:54646377-54646235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
344-500
               

               
Cow position:
               
chr18:1733296-1733454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
350-500
               

               
Cow position:
               
chr18:45395896-45395739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               
Show alignments to all cow chromosomes.